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Search term: YAL001C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TFC3
SGD link S000000001
Alternative ID YAL001C
Description Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding
Synonyms YAL001C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38328

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) sfc3
(SPBC336.07)		 GI:19112919 Q9UST7
Saccharomyces cerevisiae (Sce) TFC3
(S000000001)		 GI:6319317
Kluyveromyces lactis (Kla) KLLA0A08734g GI:50302891
Eremothecium gossypii (Ego) AGOS_AFL002C GI:45198517


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000001
SpoSPBC336.07
GO:0000799 nuclear condensin complex C
IDA
SceS000000001
GO:0005634 nucleus C
IDA
SpoSPBC336.07
GO:0005635 nuclear envelope C
IDA
SpoSPBC336.07
GO:0005739 mitochondrion C
IDA
SceS000000001
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPBC336.07
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0071168 protein localization to chromatin P
IMP
SceS000000001

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17622

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3191 AFL002C
Candida glabrata (Cgl) cgl30 CAGL0A00803g
Debaryomyces hansenii (Dha) dha1978 DEHA0C12397g
Kluyveromyces lactis (Kla) kla380 KLLA0A08734g
Saccharomyces cerevisiae (Sce) sce1 YAL001C
(S000000001)
Schizosaccharomyces pombe (Spo) spo1137 SPBC336.07 Q9UST7
Yarrowia lipolytica (Yli) yli2607 YALI0C22231g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000001
SpoSPBC336.07
GO:0000799 nuclear condensin complex C
IDA
SceS000000001
GO:0005634 nucleus C
IDA
SpoSPBC336.07
GO:0005635 nuclear envelope C
IDA
SpoSPBC336.07
GO:0005739 mitochondrion C
IDA
SceS000000001
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPBC336.07
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0071168 protein localization to chromatin P
IMP
SceS000000001

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC336.07
(Q9UST7)		 YAL001C
(S000000001)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000001
SpoSPBC336.07
GO:0000799 nuclear condensin complex C
IDA
SceS000000001
GO:0005634 nucleus C
IDA
SpoSPBC336.07
GO:0005635 nuclear envelope C
IDA
SpoSPBC336.07
GO:0005739 mitochondrion C
IDA
SceS000000001
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPBC336.07
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPBC336.07
TAS
SceS000000001
GO:0071168 protein localization to chromatin P
IMP
SceS000000001

Back to the top
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