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Search term: YAL003W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name EFB1
SGD link S000000003
Alternative ID YAL003W
Description Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site
Synonyms YAL003W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1668 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Elongation factor 1 beta/delta chain

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g30230 GI:15220700
Arabidopsis thaliana (Ath) At2g18110 GI:15224107
Arabidopsis thaliana (Ath) At5g12110 GI:15239877
Arabidopsis thaliana (Ath) At5g19510 GI:6686821
Caenorhabditis elegans (Cel) CE00548
(WBGene00018846)		 GI:17553634 P34460
Caenorhabditis elegans (Cel) CE18378 GI:17543344
Drosophila melanogaster (Dme) 7297626
(eEF1delta)		 GI:19921046
Drosophila melanogaster (Dme) 7297627 GI:7297627
Drosophila melanogaster (Dme) 7302868 GI:17864432
Homo sapiens (Hsa) Hs14150205 GI:14150205
Homo sapiens (Hsa) Hs17448940 GI:17448940
Homo sapiens (Hsa) Hs17456323 GI:17456323
Homo sapiens (Hsa) Hs17463402 GI:17463402
Homo sapiens (Hsa) Hs17464195 GI:17464195
Homo sapiens (Hsa) Hs18566774 GI:18566774
Homo sapiens (Hsa) Hs18573093 GI:18573093
Homo sapiens (Hsa) Hs20469472 GI:20469472
Homo sapiens (Hsa) Hs20480522 GI:20480522
Homo sapiens (Hsa) Hs21686973 GI:20545974
Homo sapiens (Hsa) Hs22045475 GI:22045475
Homo sapiens (Hsa) Hs22051469 GI:22051469
Homo sapiens (Hsa) Hs22057527 GI:22057527
Homo sapiens (Hsa) Hs4503477 GI:4503477 P24534
Homo sapiens (Hsa) Hs4503479 GI:4503479
Saccharomyces cerevisiae (Sce) YAL003w
(S000000003)		 GI:6319315 P32471
Schizosaccharomyces pombe (Spo) SPCC1450.04 GI:19075803 O74173


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPCC1450.04
GO:0005840 ribosome C
TAS
SceS000000003
GO:0005853 eukaryotic translation elongation factor 1
complex		 C
IMP
SceS000000003
ISS
AthAt5g19510
At5g12110
At1g30230
At2g18110
DmeeEF1delta
SceS000000003
SpoSPCC1450.04
NAS
DmeeEF1delta
GO:0005875 microtubule associated complex C
IDA
DmeeEF1delta
GO:0005886 plasma membrane C
IDA
AthAt1g30230
GO:0048046 apoplast C
IDA
AthAt5g19510
GO:0003746 translation elongation factor activity F
ISS
AthAt5g12110
At5g19510
At2g18110
At1g30230
DmeeEF1delta
SpoSPCC1450.04
NAS
DmeeEF1delta
TAS
SceS000000003
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000000003
NAS
DmeeEF1delta
GO:0002119 nematode larval development P
IMP
CelWBGene00018846
GO:0006414 translational elongation P
ISS
AthAt5g12110
At5g19510
At1g30230
At2g18110
DmeeEF1delta
SpoSPCC1450.04
NAS
DmeeEF1delta
TAS
SceS000000003
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00018846
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00018846
GO:0040007 growth P
IMP
CelWBGene00018846
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00018846
GO:0042742 defense response to bacterium P
IEP
AthAt5g19510
GO:0046686 response to cadmium ion P
IEP
AthAt1g30230

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
1480

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) EEF1B2 GI:11136628
Pan troglodytes (Ptr) EEF1B2 GI:114582926
Canis familiaris (Cfa) EEF1B2 GI:57110955
Mus musculus (Mmu) Eef1b2
(MGI:1929520)		 GI:31980922 O70251
Rattus norvegicus (Rno) Eef1b2 GI:34876714
Gallus gallus (Gga) RCJMB04_32c11 GI:46048866
Drosophila melanogaster (Dme) Ef1beta GI:45549259
Anopheles gambiae (Aga) AgaP_AGAP010612 GI:58386238
Anopheles gambiae (Aga) AgaP_AGAP010613 GI:57925010
Caenorhabditis elegans (Cel) F54H12.6
(CE00548;
WBGene00018846)		 GI:17553634 P34460
Schizosaccharomyces pombe (Spo) tef5
(SPCC1450.04)		 GI:19075803 O74173
Saccharomyces cerevisiae (Sce) EFB1
(S000000003)		 GI:6319315 P32471
Kluyveromyces lactis (Kla) KLLA0C18469g GI:50306123
Eremothecium gossypii (Ego) AGOS_AFR003C GI:45198521
Magnaporthe grisea (Mgr) MGG_04436 GI:39944908
Neurospora crassa (Ncr) NCU06035.1 GI:32410819
Arabidopsis thaliana (Ath) AT5G12110 GI:15239877
Arabidopsis thaliana (Ath) AT5G19510 GI:30687350
Oryza sativa (Osa) Os07g0662500 GI:115473889


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005811 lipid particle C
IDA
DmeEf1beta
GO:0005829 cytosol C
EXP
HsaEEF1B2
IDA
SpoSPCC1450.04
ISS
DmeEf1beta
NAS
DmeEf1beta
GO:0005840 ribosome C
TAS
SceS000000003
GO:0005853 eukaryotic translation elongation factor 1
complex		 C
IMP
SceS000000003
ISS
AthAt5g19510
At5g12110
DmeEf1beta
MmuMGI:1929520
SceS000000003
SpoSPCC1450.04
NAS
DmeEf1beta
HsaEEF1B2
GO:0048046 apoplast C
IDA
AthAt5g19510
GO:0003746 translation elongation factor activity F
ISS
AthAt5g12110
At5g19510
DmeEf1beta
MmuMGI:1929520
SpoSPCC1450.04
NAS
DmeEf1beta
HsaEEF1B2
TAS
SceS000000003
GO:0003747 translation release factor activity F
ISS
DmeEf1beta
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000000003
NAS
DmeEf1beta
GO:0005515 protein binding F
IPI
HsaEEF1B2
GO:0002119 nematode larval development P
IMP
CelWBGene00018846
GO:0006414 translational elongation P
EXP
HsaEEF1B2
ISS
AthAt5g12110
At5g19510
DmeEf1beta
MmuMGI:1929520
SpoSPCC1450.04
NAS
DmeEf1beta
HsaEEF1B2
TAS
SceS000000003
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00018846
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00018846
GO:0040007 growth P
IMP
CelWBGene00018846
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00018846
GO:0042742 defense response to bacterium P
IEP
AthAt5g19510

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_930

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7578 ENSANGP00000017979
Anopheles gambiae (Aga) aga7579 ENSANGP00000025422
Ashbya gossypii (Ago) ago3195 AFR003C
Arabidopsis thaliana (Ath) ath3159 At1g30230.1
Arabidopsis thaliana (Ath) ath8663 At2g18110.1
Arabidopsis thaliana (Ath) ath23427 At5g12110.1
Arabidopsis thaliana (Ath) ath24224 At5g19510.1
Caenorhabditis elegans (Cel) cel10298 F54H12.6
(CE00548;
WBGene00018846)
Candida glabrata (Cgl) cgl1598 CAGL0F08547g
Cryptococcus neoformans (Cne) cne5450 179.m00302
Dictyostelium discoideum (Ddi) ddi13332 DDB0191174
Debaryomyces hansenii (Dha) dha1975 DEHA0C12331g
Drosophila melanogaster (Dme) dme5535 CG6341-PA
(FBgn0028737)
Danio rerio (Dre) dre20294 ENSDARP00000018258
Takifugu rubripes (Fru) fru5469 SINFRUP00000140205
Takifugu rubripes (Fru) fru5470 SINFRUP00000170088
Gallus gallus (Gga) gga21378 ENSGALP00000013968
(RCJMB04_32c11)		 Q5ZHY1
Homo sapiens (Hsa) hsa19172 ENSP00000236957
(EEF1B2)		 P24534
Homo sapiens (Hsa) hsa19173 ENSP00000338508
Homo sapiens (Hsa) hsa32572 ENSP00000339198
Kluyveromyces lactis (Kla) kla2022 KLLA0C18469g
Mus musculus (Mmu) mmu436 ENSMUSP00000027108
(MGI:1929520)		 O70251
Neurospora crassa (Ncr) ncr5865 NCU06035.2
Oryza sativa (Osa) osa4941 2129.m00061
Oryza sativa (Osa) osa43662 5302.m00143
Oryza sativa (Osa) osa54421 6077.m00128
Oryza sativa (Osa) osa67735 6896.m00151
Oryza sativa (Osa) osa87664 9236.m00112
Plasmodium falciparum (Pfa) pfa2846 PFC0870w
Plasmodium falciparum (Pfa) pfa4596 PFI0645w
Rattus norvegicus (Rno) rno30142 ENSRNOP00000036882
(RGD:1311415)		 B5DEN5
Rattus norvegicus (Rno) rno17924 ENSRNOP00000043954
Rattus norvegicus (Rno) rno17923 ENSRNOP00000051491
Saccharomyces cerevisiae (Sce) sce3 YAL003W
(S000000003)
Schizosaccharomyces pombe (Spo) spo4085 SPCC1450.04 O74173
Yarrowia lipolytica (Yli) yli5754 YALI0F09669g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005811 lipid particle C
IDA
DmeFBgn0028737
GO:0005829 cytosol C
IDA
SpoSPCC1450.04
ISS
DmeFBgn0028737
NAS
DmeFBgn0028737
GO:0005840 ribosome C
TAS
SceS000000003
GO:0005853 eukaryotic translation elongation factor 1
complex		 C
IMP
SceS000000003
ISS
AthAt5g19510
At5g12110
At1g30230
At2g18110
DmeFBgn0028737
MmuMGI:1929520
SceS000000003
SpoSPCC1450.04
NAS
DmeFBgn0028737
GO:0005886 plasma membrane C
IDA
AthAt1g30230
GO:0048046 apoplast C
IDA
AthAt5g19510
GO:0003746 translation elongation factor activity F
ISS
AthAt5g12110
At5g19510
At2g18110
At1g30230
DmeFBgn0028737
MmuMGI:1929520
SpoSPCC1450.04
NAS
DmeFBgn0028737
TAS
SceS000000003
GO:0003747 translation release factor activity F
ISS
DmeFBgn0028737
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000000003
NAS
DmeFBgn0028737
GO:0002119 nematode larval development P
IMP
CelWBGene00018846
GO:0006414 translational elongation P
ISS
AthAt5g12110
At5g19510
At1g30230
At2g18110
DmeFBgn0028737
MmuMGI:1929520
SpoSPCC1450.04
NAS
DmeFBgn0028737
TAS
SceS000000003
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00018846
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00018846
GO:0040007 growth P
IMP
CelWBGene00018846
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00018846
GO:0042742 defense response to bacterium P
IEP
AthAt5g19510
GO:0046686 response to cadmium ion P
IEP
AthAt1g30230

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1450.04
(O74173)		 YAL003W
(S000000003)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPCC1450.04
GO:0005840 ribosome C
TAS
SceS000000003
GO:0005853 eukaryotic translation elongation factor 1
complex		 C
IMP
SceS000000003
ISS
SceS000000003
SpoSPCC1450.04
GO:0003746 translation elongation factor activity F
ISS
SpoSPCC1450.04
TAS
SceS000000003
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
IDA
SceS000000003
GO:0006414 translational elongation P
ISS
SpoSPCC1450.04
TAS
SceS000000003

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GO info in one table:

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