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Search term: YAL030W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SNC1
SGD link S000000028
Alternative ID YAL030W
Description Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins
Synonyms YAL030W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0860 -CDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Synaptobrevin/VAMP-like protein

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE00096
(WBGene00004899)		 GI:17554800 P34351
Caenorhabditis elegans (Cel) CE13646
(WBGene00044062)		 GI:17536285 Q94057
Caenorhabditis elegans (Cel) CE18252
(WBGene00004897)		 GI:17563282 O02495
Caenorhabditis elegans (Cel) CE27756
(WBGene00004898)		 GI:17560094
Caenorhabditis elegans (Cel) CE28426
(WBGene00007200)		 GI:17538306
Drosophila melanogaster (Dme) 7292118 GI:7292118 Q9W0C1
Drosophila melanogaster (Dme) 7303772 GI:17647971 B7YZD5
Homo sapiens (Hsa) Hs7657673
(VAMP1)		 GI:7657673 P23763
Homo sapiens (Hsa) Hs4759300
(VAMP3)		 GI:4759300 Q15836
Homo sapiens (Hsa) Hs4507863 GI:4507863
Homo sapiens (Hsa) Hs5730112
(VAMP5)		 GI:5730112 O95183
Homo sapiens (Hsa) Hs14736500 GI:14736500
Homo sapiens (Hsa) Hs14043026
(VAMP8)		 GI:14043026 Q9BV40
Homo sapiens (Hsa) Hs7657675 GI:7657675
Homo sapiens (Hsa) Hs9257251 GI:9257251 P23763
Saccharomyces cerevisiae (Sce) YAL030w
(S000000028)		 GI:6319289 P31109
Saccharomyces cerevisiae (Sce) YLR093c
(S000004083)		 GI:9755337 Q12255
Saccharomyces cerevisiae (Sce) YOR327c
(S000005854)		 GI:6324903 P33328
Schizosaccharomyces pombe (Spo) SPAC6G9.11 GI:19115032 Q92356
Caenorhabditis elegans (Cel) CE00096
(WBGene00004899)		 GI:17554800 P34351
Caenorhabditis elegans (Cel) CE13646
(WBGene00044062)		 GI:17536285 Q94057
Caenorhabditis elegans (Cel) CE18252
(WBGene00004897)		 GI:17563282 O02495
Caenorhabditis elegans (Cel) CE27756
(WBGene00004898)		 GI:17560094
Caenorhabditis elegans (Cel) CE28426
(WBGene00007200)		 GI:17538306
Drosophila melanogaster (Dme) 7292118 GI:7292118 Q9W0C1
Drosophila melanogaster (Dme) 7303772 GI:17647971 B7YZD5
Homo sapiens (Hsa) Hs7657673
(VAMP1)		 GI:7657673 P23763
Homo sapiens (Hsa) Hs4759300
(VAMP3)		 GI:4759300 Q15836
Homo sapiens (Hsa) Hs4507863 GI:4507863
Homo sapiens (Hsa) Hs5730112
(VAMP5)		 GI:5730112 O95183
Homo sapiens (Hsa) Hs14736500 GI:14736500
Homo sapiens (Hsa) Hs14043026
(VAMP8)		 GI:14043026 Q9BV40
Homo sapiens (Hsa) Hs7657675 GI:7657675
Homo sapiens (Hsa) Hs9257251 GI:9257251 P23763
Saccharomyces cerevisiae (Sce) YAL030w
(S000000028)		 GI:6319289 P31109
Saccharomyces cerevisiae (Sce) YLR093c
(S000004083)		 GI:9755337 Q12255
Saccharomyces cerevisiae (Sce) YOR327c
(S000005854)		 GI:6324903 P33328
Schizosaccharomyces pombe (Spo) SPAC6G9.11 GI:19115032 Q92356


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000322 storage vacuole C
RCA
SceS000004083
GO:0000323 lytic vacuole C
RCA
SceS000004083
GO:0000324 fungal-type vacuole C
RCA
SceS000004083
GO:0005624 membrane fraction C
TAS
HsaVAMP8
GO:0005737 cytoplasm C
IDA
SpoSPAC6G9.11
GO:0005768 endosome C
IDA
SceS000000028
S000005854
GO:0005769 early endosome C
TAS
HsaVAMP8
GO:0005774 vacuolar membrane C
IDA
SceS000004083
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC6G9.11
GO:0005794 Golgi apparatus C
IDA
SpoSPAC6G9.11
GO:0005802 trans-Golgi network C
IDA
SceS000000028
S000005854
GO:0005886 plasma membrane C
IDA
SceS000000028
ISS
HsaVAMP3
GO:0005887 integral to plasma membrane C
TAS
HsaVAMP1
GO:0005935 cellular bud neck C
IDA
SceS000000028
GO:0008021 synaptic vesicle C
IDA
CelWBGene00004897
GO:0030133 transport vesicle C
IDA
SceS000000028
TAS
SceS000005854
GO:0030136 clathrin-coated vesicle C
IDA
HsaVAMP3
GO:0030424 axon C
IDA
CelWBGene00004897
GO:0030659 cytoplasmic vesicle membrane C
IDA
SpoSPAC6G9.11
GO:0031201 SNARE complex C
IDA
SceS000000028
GO:0032153 cell division site C
IDA
SpoSPAC6G9.11
GO:0048786 presynaptic active zone C
IDA
CelWBGene00004897
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC6G9.11
GO:0055037 recycling endosome C
IDA
HsaVAMP3
GO:0005484 SNAP receptor activity F
IDA
CelWBGene00004897
SceS000005854
ISS
SpoSPAC6G9.11
TAS
SceS000000028
S000004083
S000005854
GO:0005515 protein binding F
IPI
HsaVAMP1
VAMP3
GO:0000003 reproduction P
IMP
CelWBGene00004898
GO:0001921 positive regulation of receptor
recycling		 P
ISS
HsaVAMP3
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00004897
GO:0002119 nematode larval development P
IMP
CelWBGene00004897
GO:0006886 intracellular protein transport P
NAS
SpoSPAC6G9.11
GO:0006887 exocytosis P
TAS
HsaVAMP3
GO:0006892 post-Golgi vesicle-mediated transport P
EXP
HsaVAMP8
GO:0006893 Golgi to plasma membrane transport P
TAS
SceS000000028
S000005854
GO:0006897 endocytosis P
IDA
SpoSPAC6G9.11
IMP
SceS000000028
TAS
SceS000005854
S000000028
GO:0006904 vesicle docking involved in exocytosis P
TAS
HsaVAMP3
GO:0006906 vesicle fusion P
TAS
SceS000000028
S000004083
S000005854
GO:0006914 autophagy P
RCA
SceS000004083
GO:0006944 cellular membrane fusion P
RCA
SceS000005854
TAS
HsaVAMP3
GO:0007271 synaptic transmission, cholinergic P
IDA
CelWBGene00004897
GO:0009826 unidimensional cell growth P
IMP
SpoSPAC6G9.11
GO:0016044 cellular membrane organization P
EXP
HsaVAMP8
GO:0016050 vesicle organization P
RCA
SceS000005854
GO:0016079 synaptic vesicle exocytosis P
IDA
CelWBGene00004897
GO:0016192 vesicle-mediated transport P
IMP
SpoSPAC6G9.11
ISS
HsaVAMP3
GO:0019915 lipid storage P
IMP
CelWBGene00044062
GO:0030421 defecation P
IMP
CelWBGene00004897
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000028
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPAC6G9.11
GO:0034446 substrate adhesion-dependent cell
spreading		 P
ISS
HsaVAMP3
GO:0040011 locomotion P
IMP
CelWBGene00004897
GO:0042144 vacuole fusion, non-autophagic P
IDA
SceS000004083
IMP
SceS000004083
GO:0043051 regulation of pharyngeal pumping P
IDA
CelWBGene00004897
GO:0043134 regulation of hindgut contraction P
IMP
CelWBGene00004897
GO:0048284 organelle fusion P
RCA
SceS000005854
S000000028

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_578

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3151 ENSANGP00000009258
Ashbya gossypii (Ago) ago2096 ADR355C
Arabidopsis thaliana (Ath) ath421 At1g04750.1
Arabidopsis thaliana (Ath) ath422 At1g04760.1
Arabidopsis thaliana (Ath) ath10283 At2g32670.1
Arabidopsis thaliana (Ath) ath10339 At2g33120.1
Caenorhabditis elegans (Cel) cel592 B0513.9
(CE28426;
WBGene00007200)
Caenorhabditis elegans (Cel) cel7162 F23H12.1
(CE27756;
WBGene00004898)
Caenorhabditis elegans (Cel) cel15257 T10H9.4
(CE18252;
WBGene00004897)
Caenorhabditis elegans (Cel) cel20439 Y69A2AR.6
(CE30471;
WBGene00022077)
Candida glabrata (Cgl) cgl1170 CAGL0E05258g
Candida glabrata (Cgl) cgl1899 CAGL0G06358g
Dictyostelium discoideum (Ddi) ddi12560 DDB0214903
Dictyostelium discoideum (Ddi) ddi7555 DDB0219546
Debaryomyces hansenii (Dha) dha2569 DEHA0D06160g
Drosophila melanogaster (Dme) dme4266 CG12210-PA
(FBgn0003660)
Drosophila melanogaster (Dme) dme4267 CG12210-PB
(FBgn0003660)
Danio rerio (Dre) dre9352 ENSDARP00000012194
Danio rerio (Dre) dre19156 ENSDARP00000032940
(vamp8)		 Q7ZUC1
Danio rerio (Dre) dre3024 ENSDARP00000034557
(zgc:92912)		 Q6DGI1
Takifugu rubripes (Fru) fru29348 SINFRUP00000136502
Takifugu rubripes (Fru) fru19417 SINFRUP00000153951
Takifugu rubripes (Fru) fru2236 SINFRUP00000160047
Gallus gallus (Gga) gga22229 ENSGALP00000005156
(VAMP4)
Homo sapiens (Hsa) hsa2605 ENSP00000236192
(VAMP4)		 O75379-1
Homo sapiens (Hsa) hsa18101 ENSP00000263864
(VAMP8)		 Q9BV40
Homo sapiens (Hsa) hsa6954 ENSP00000324623
Homo sapiens (Hsa) hsa6953 ENSP00000347664
(VAMP1)		 B4DZX9
Homo sapiens (Hsa) hsa6955 ENSP00000355122
(VAMP1)		 P23763-3
Kluyveromyces lactis (Kla) kla167 KLLA0A03883g
Mus musculus (Mmu) mmu1349 ENSMUSP00000028019
Mus musculus (Mmu) mmu22748 ENSMUSP00000032487
(MGI:1313276)		 Q62442-1
Mus musculus (Mmu) mmu1350 ENSMUSP00000051544
(MGI:1858730)		 Q8BSN6
Mus musculus (Mmu) mmu22747 ENSMUSP00000063466
(MGI:1313276)
Neurospora crassa (Ncr) ncr550 NCU00566.2
Oryza sativa (Osa) osa64377 6706.m00168
Oryza sativa (Osa) osa70841 6988.m00134
Rattus norvegicus (Rno) rno9385 ENSRNOP00000004208
(RGD:1309753)
Rattus norvegicus (Rno) rno9384 ENSRNOP00000004243
(RGD:1309753)
Rattus norvegicus (Rno) rno21631 ENSRNOP00000017301
(RGD:620421)		 Q9WUF4
Rattus norvegicus (Rno) rno22236 ENSRNOP00000025081
(RGD:3948)		 Q63666-1
Saccharomyces cerevisiae (Sce) sce33 YAL030W
(S000000028)
Saccharomyces cerevisiae (Sce) sce6078 YOR327C
(S000005854)
Schizosaccharomyces pombe (Spo) spo1288 SPAC6G9.11 Q92356
Yarrowia lipolytica (Yli) yli118 YALI0A03113g
Yarrowia lipolytica (Yli) yli3880 YALI0E00594g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC6G9.11
GO:0005739 mitochondrion C
IDA
MmuMGI:1313276
GO:0005768 endosome C
IDA
SceS000000028
S000005854
TAS
AthAt1g04750
At1g04760
At2g32670
At2g33120
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC6G9.11
GO:0005794 Golgi apparatus C
IDA
SpoSPAC6G9.11
GO:0005802 trans-Golgi network C
IDA
SceS000000028
S000005854
GO:0005886 plasma membrane C
IDA
AthAt1g04750
At2g33120
DmeFBgn0003660
SceS000000028
NAS
DmeFBgn0003660
TAS
AthAt1g04760
At1g04750
At2g32670
At2g33120
GO:0005935 cellular bud neck C
IDA
SceS000000028
GO:0008021 synaptic vesicle C
IDA
CelWBGene00004897
ISS
DmeFBgn0003660
NAS
DmeFBgn0003660
GO:0009507 chloroplast C
IDA
AthAt1g04760
GO:0016020 membrane C
ISS
AthAt1g04760
At1g04750
At2g32670
At2g33120
GO:0030133 transport vesicle C
IDA
SceS000000028
TAS
SceS000005854
GO:0030424 axon C
IDA
CelWBGene00004897
GO:0030659 cytoplasmic vesicle membrane C
IDA
SpoSPAC6G9.11
GO:0031201 SNARE complex C
IDA
SceS000000028
GO:0032153 cell division site C
IDA
SpoSPAC6G9.11
GO:0048786 presynaptic active zone C
IDA
CelWBGene00004897
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC6G9.11
GO:0003674 molecular_function F
ND
AthAt1g04760
At1g04750
At2g32670
At2g33120
MmuMGI:1858730
GO:0005484 SNAP receptor activity F
IDA
CelWBGene00004897
SceS000005854
ISS
DmeFBgn0003660
SpoSPAC6G9.11
NAS
DmeFBgn0003660
TAS
SceS000000028
S000005854
GO:0000003 reproduction P
IMP
CelWBGene00004898
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00004897
GO:0002119 nematode larval development P
IMP
CelWBGene00004897
GO:0006886 intracellular protein transport P
NAS
SpoSPAC6G9.11
GO:0006893 Golgi to plasma membrane transport P
TAS
SceS000000028
S000005854
GO:0006897 endocytosis P
IDA
SpoSPAC6G9.11
IMP
SceS000000028
TAS
SceS000005854
S000000028
GO:0006906 vesicle fusion P
TAS
SceS000000028
S000005854
GO:0006944 cellular membrane fusion P
RCA
SceS000005854
GO:0007269 neurotransmitter secretion P
NAS
DmeFBgn0003660
GO:0007271 synaptic transmission, cholinergic P
IDA
CelWBGene00004897
GO:0008150 biological_process P
ND
MmuMGI:1858730
GO:0009826 unidimensional cell growth P
IMP
SpoSPAC6G9.11
GO:0016050 vesicle organization P
RCA
SceS000005854
GO:0016079 synaptic vesicle exocytosis P
IDA
CelWBGene00004897
GO:0016081 synaptic vesicle docking involved in
exocytosis		 P
ISS
DmeFBgn0003660
GO:0016192 vesicle-mediated transport P
IMP
SpoSPAC6G9.11
ISS
DmeFBgn0003660
NAS
DmeFBgn0003660
GO:0030421 defecation P
IMP
CelWBGene00004897
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000028
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPAC6G9.11
GO:0035149 lumen formation, open tracheal
system		 P
TAS
DmeFBgn0003660
GO:0040011 locomotion P
IMP
CelWBGene00004897
GO:0043051 regulation of pharyngeal pumping P
IDA
CelWBGene00004897
GO:0043134 regulation of hindgut contraction P
IMP
CelWBGene00004897
GO:0048284 organelle fusion P
RCA
SceS000005854
S000000028
GO:0048489 synaptic vesicle transport P
NAS
DmeFBgn0003660

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC6G9.11
(Q92356)		 YAL030W
(S000000028)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC6G9.11
GO:0005768 endosome C
IDA
SceS000000028
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC6G9.11
GO:0005794 Golgi apparatus C
IDA
SpoSPAC6G9.11
GO:0005802 trans-Golgi network C
IDA
SceS000000028
GO:0005886 plasma membrane C
IDA
SceS000000028
GO:0005935 cellular bud neck C
IDA
SceS000000028
GO:0030133 transport vesicle C
IDA
SceS000000028
GO:0030659 cytoplasmic vesicle membrane C
IDA
SpoSPAC6G9.11
GO:0031201 SNARE complex C
IDA
SceS000000028
GO:0032153 cell division site C
IDA
SpoSPAC6G9.11
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC6G9.11
GO:0005484 SNAP receptor activity F
ISS
SpoSPAC6G9.11
TAS
SceS000000028
GO:0006886 intracellular protein transport P
NAS
SpoSPAC6G9.11
GO:0006893 Golgi to plasma membrane transport P
TAS
SceS000000028
GO:0006897 endocytosis P
IDA
SpoSPAC6G9.11
IMP
SceS000000028
TAS
SceS000000028
GO:0006906 vesicle fusion P
TAS
SceS000000028
GO:0009826 unidimensional cell growth P
IMP
SpoSPAC6G9.11
GO:0016192 vesicle-mediated transport P
IMP
SpoSPAC6G9.11
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000028
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPAC6G9.11
GO:0048284 organelle fusion P
RCA
SceS000000028

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Query species:

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GO info in one table:

s.khadayate@ucl.ac.uk