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Search term: YAL032C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PRP45
SGD link S000000030
Alternative ID YAL032C
Description Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene
Synonyms YAL032C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2441 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGINFORMATION STORAGE AND PROCESSING mRNA splicing factor/probable chromatin binding snw family nuclear protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g77180 GI:18411393
Caenorhabditis elegans (Cel) CE06519
(WBGene00004806)
GI:17564816 Q22836
Drosophila melanogaster (Dme) 7291006 GI:17530865
Homo sapiens (Hsa) Hs6912676
(SNW1)
GI:6912676 Q13573
Homo sapiens (Hsa) Hs20475567_2 GI:20475567
Saccharomyces cerevisiae (Sce) YAL032c
(S000000030)
GI:6319287 P28004
Schizosaccharomyces pombe (Spo) SPCC188.11 GI:19075713 Q09882


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt1g77180
HsaSNW1
SceS000000030
SpoSPCC188.11
GO:0005681 spliceosomal complex C
IDA
HsaSNW1
IPI
SpoSPCC188.11
GO:0005730 nucleolus C
IDA
AthAt1g77180
GO:0005816 spindle pole body C
IDA
SpoSPCC188.11
GO:0044428 nuclear part C
IDA
HsaSNW1
GO:0071006 U2-type catalytic step 1 spliceosome C
IDA
SceS000000030
GO:0071007 U2-type catalytic step 2 spliceosome C
IDA
SceS000000030
GO:0071014 post-mRNA release spliceosomal
complex
C
IDA
SceS000000030
GO:0000384 first spliceosomal transesterification
activity
F
IC
SceS000000030
GO:0000386 second spliceosomal transesterification
activity
F
IC
SceS000000030
GO:0005112 Notch binding F
IPI
HsaSNW1
GO:0005515 protein binding F
IPI
HsaSNW1
SpoSPCC188.11
GO:0016563 transcription activator activity F
IDA
AthAt1g77180
ISS
CelWBGene00004806
GO:0016564 transcription repressor activity F
IDA
HsaSNW1
GO:0000003 reproduction P
IMP
CelWBGene00004806
GO:0000350 generation of catalytic spliceosome for second
transesterification step
P
IGI
SceS000000030
IMP
SceS000000030
GO:0000398 nuclear mRNA splicing, via spliceosome P
IDA
HsaSNW1
IPI
SpoSPCC188.11
GO:0002119 nematode larval development P
IMP
CelWBGene00004806
GO:0006357 regulation of transcription from RNA polymerase II
promoter
P
TAS
HsaSNW1
GO:0007281 germ cell development P
IMP
CelWBGene00004806
GO:0008380 RNA splicing P
ISS
AthAt1g77180
GO:0009651 response to salt stress P
IEP
AthAt1g77180
GO:0009737 response to abscisic acid stimulus P
IEP
AthAt1g77180
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004806
GO:0010468 regulation of gene expression P
IMP
CelWBGene00004806
GO:0010555 response to mannitol stimulus P
IEP
AthAt1g77180
GO:0016481 negative regulation of transcription P
IDA
HsaSNW1
GO:0018991 oviposition P
IMP
CelWBGene00004806
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004806
GO:0040007 growth P
IMP
CelWBGene00004806
GO:0040011 locomotion P
IMP
CelWBGene00004806
GO:0040025 vulval development P
IMP
CelWBGene00004806
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00004806
GO:0042303 molting cycle P
IMP
CelWBGene00004806
GO:0060065 uterus development P
IMP
CelWBGene00004806
GO:0070317 negative regulation of G0 to G1
transition
P
IMP
SpoSPCC188.11

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68556

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PRP45
(S000000030)
GI:6319287 P28004
Kluyveromyces lactis (Kla) KLLA0F02475g GI:50310345
Eremothecium gossypii (Ego) AGOS_ADR361W GI:45188234


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000030
GO:0071006 U2-type catalytic step 1 spliceosome C
IDA
SceS000000030
GO:0071007 U2-type catalytic step 2 spliceosome C
IDA
SceS000000030
GO:0071014 post-mRNA release spliceosomal
complex
C
IDA
SceS000000030
GO:0000384 first spliceosomal transesterification
activity
F
IC
SceS000000030
GO:0000386 second spliceosomal transesterification
activity
F
IC
SceS000000030
GO:0000350 generation of catalytic spliceosome for second
transesterification step
P
IGI
SceS000000030
IMP
SceS000000030

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2368

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga7075 ENSANGP00000003971
Ashbya gossypii (Ago) ago2102 ADR361W
Arabidopsis thaliana (Ath) ath7057 At1g77180.1
Caenorhabditis elegans (Cel) cel16544 T27F2.1
(CE06519;
WBGene00004806)
Candida glabrata (Cgl) cgl5169 CAGL0M11814g
Dictyostelium discoideum (Ddi) ddi11452 DDB0191206
Debaryomyces hansenii (Dha) dha1653 DEHA0C05060g
Drosophila melanogaster (Dme) dme17088 CG8264-PA
(FBgn0004856)
Danio rerio (Dre) dre3688 ENSDARP00000042975
Takifugu rubripes (Fru) fru10273 SINFRUP00000128826
Takifugu rubripes (Fru) fru10274 SINFRUP00000176868
Gallus gallus (Gga) gga19619 ENSGALP00000017080
(SNW1)
Gallus gallus (Gga) gga19621 ENSGALP00000017082
Homo sapiens (Hsa) hsa9888 ENSP00000261531
(SNW1)
Q13573
Kluyveromyces lactis (Kla) kla4191 KLLA0F02475g
Mus musculus (Mmu) mmu6048 ENSMUSP00000021428
(MGI:1913604)
Q9CSN1
Neurospora crassa (Ncr) ncr3689 NCU03799.2
Oryza sativa (Osa) osa7805 2525.m00109
Oryza sativa (Osa) osa40050 5008.m00059
Plasmodium falciparum (Pfa) pfa127 PFB0875c
Rattus norvegicus (Rno) rno25477 ENSRNOP00000016753
(RGD:1310843)
Saccharomyces cerevisiae (Sce) sce36 YAL032C
(S000000030)
Schizosaccharomyces pombe (Spo) spo4644 SPCC188.11 Q09882
Yarrowia lipolytica (Yli) yli2205 YALI0C11715g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
NAS
DmeFBgn0004856
GO:0005634 nucleus C
IDA
AthAt1g77180
SceS000000030
SpoSPCC188.11
ISO
MmuMGI:1913604
NAS
DmeFBgn0004856
GO:0005681 spliceosomal complex C
IPI
SpoSPCC188.11
GO:0005730 nucleolus C
IDA
AthAt1g77180
GO:0005816 spindle pole body C