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Search term: YAL044C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GCV3
SGD link S000000042
Alternative ID YAL044C
Description H subunit of the mitochondrial glycine decarboxylase complex, required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF
Synonyms YAL044C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3373 ACDHYP-

KOGs classification KOGs description
METABOLISM Glycine cleavage system H protein (lipoate-binding)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g32470 GI:15223217
Arabidopsis thaliana (Ath) At2g35120 GI:15226906
Arabidopsis thaliana (Ath) At2g35370 GI:15226973
Caenorhabditis elegans (Cel) CE05912
(WBGene00009918)
GI:17507493 Q20634
Caenorhabditis elegans (Cel) CE17610
(WBGene00008354)
GI:17551294 O62122
Drosophila melanogaster (Dme) 7296410 GI:7296410
Homo sapiens (Hsa) Hs13652471_1 GI:13652471
Homo sapiens (Hsa) Hs20541772 GI:20541772
Homo sapiens (Hsa) Hs22046625 GI:22046625
Homo sapiens (Hsa) Hs22047808 GI:22047808
Homo sapiens (Hsa) Hs22050167_1 GI:22050167
Homo sapiens (Hsa) Hs4758424_1 GI:4758424
Saccharomyces cerevisiae (Sce) YAL044c
(S000000042)
GI:6319272
Schizosaccharomyces pombe (Spo) SPBP19A11.01 GI:19112961 Q9HDV9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g35370
GO:0005739 mitochondrion C
IDA
AthAt1g32470
At2g35120
SceS000000042
SpoSPBP19A11.01
ISS
SpoSPBP19A11.01
TAS
AthAt2g35370
GO:0005960 glycine cleavage complex C
ISA
SceS000000042
ISS
AthAt2g35120
At1g32470
SpoSPBP19A11.01
GO:0009507 chloroplast C
IDA
AthAt2g35370
At1g32470
GO:0009579 thylakoid C
IDA
AthAt2g35370
GO:0004047 aminomethyltransferase activity F
ISS
SpoSPBP19A11.01
GO:0004375 glycine dehydrogenase (decarboxylating)
activity
F
IMP
SceS000000042
ISA
SceS000000042
ISS
AthAt2g35120
At1g32470
SpoSPBP19A11.01
TAS
AthAt2g35370
GO:0005524 ATP binding F
IDA
AthAt2g35120
GO:0008483 transaminase activity F
ISS
SpoSPBP19A11.01
GO:0006414 translational elongation P
RCA
SceS000000042
GO:0006546 glycine catabolic process P
IMP
SceS000000042
ISS
AthAt2g35120
At1g32470
SpoSPBP19A11.01
GO:0006730 one-carbon metabolic process P
IGI
SceS000000042
GO:0009249 protein lipoylation P
IMP
SceS000000042
ISS
SpoSPBP19A11.01
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009918
GO:0009853 photorespiration P
TAS
AthAt2g35370
GO:0019464 glycine decarboxylation via glycine cleavage
system
P
ISS
SpoSPBP19A11.01
TAS
AthAt2g35370

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
90880

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GCSH GI:49574537
Pan troglodytes (Ptr) GCSH GI:55644389
Canis familiaris (Cfa) GCSH GI:73957291
Mus musculus (Mmu) Gcsh
(MGI:1915383)
GI:13386066 Q91WK5
Rattus norvegicus (Rno) Gcsh
(RGD:619946)
GI:19424306
Gallus gallus (Gga) GCSH GI:52138647
Drosophila melanogaster (Dme) ppl
(FBgn0027945)
GI:17865652
Anopheles gambiae (Aga) AgaP_AGAP006548 GI:158296037
Caenorhabditis elegans (Cel) F52A8.5
(CE05912;
WBGene00009918)
GI:17507493 Q20634
Caenorhabditis elegans (Cel) D1025.2
(CE17610;
WBGene00008354)
GI:17551294 O62122
Schizosaccharomyces pombe (Spo) SPBP19A11.01 GI:19112961 Q9HDV9
Saccharomyces cerevisiae (Sce) GCV3
(S000000042)
GI:37362609
Kluyveromyces lactis (Kla) KLLA0A03597g GI:50302447
Eremothecium gossypii (Ego) AGOS_ADR396W GI:45188268
Magnaporthe grisea (Mgr) MGG_04861 GI:39940758
Neurospora crassa (Ncr) NCU08877.1 GI:32421651
Arabidopsis thaliana (Ath) AT2G35120 GI:15226906
Oryza sativa (Osa) Os06g0667600 GI:115469432
Oryza sativa (Osa) Os02g0170100 GI:115444493


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g35120
MmuMGI:1915383
SceS000000042
SpoSPBP19A11.01
ISO
MmuMGI:1915383
ISS
DmeFBgn0027945
SpoSPBP19A11.01
GO:0005960 glycine cleavage complex C
ISA
SceS000000042
ISS
AthAt2g35120
DmeFBgn0027945
SpoSPBP19A11.01
GO:0004047 aminomethyltransferase activity F
ISO
MmuMGI:1915383
ISS
SpoSPBP19A11.01
GO:0004375 glycine dehydrogenase (decarboxylating)
activity
F
IMP
SceS000000042
ISA
SceS000000042
ISS
AthAt2g35120
SpoSPBP19A11.01
GO:0005524 ATP binding F
IDA
AthAt2g35120
GO:0008483 transaminase activity F
ISS
SpoSPBP19A11.01
GO:0006414 translational elongation P
RCA
SceS000000042
GO:0006546 glycine catabolic process P
IMP
SceS000000042
ISS
AthAt2g35120
DmeFBgn0027945
SpoSPBP19A11.01
TAS
HsaGCSH
GO:0006730 one-carbon metabolic process P
IGI
SceS000000042
GO:0009249 protein lipoylation P
IMP
SceS000000042
ISS
SpoSPBP19A11.01
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009918
GO:0019464 glycine decarboxylation via glycine cleavage
system
P
ISO
MmuMGI:1915383
ISS
SpoSPBP19A11.01

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_619

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga2005 ENSANGP00000024265
Ashbya gossypii (Ago) ago2136 ADR396W
Arabidopsis thaliana (Ath) ath3401 At1g32470.1
Arabidopsis thaliana (Ath) ath10564 At2g35120.1
Arabidopsis thaliana (Ath) ath10591 At2g35370.1
Caenorhabditis elegans (Cel) cel4962 D1025.2
(CE17610;
WBGene00008354)
Caenorhabditis elegans (Cel) cel9793 F52A8.5
(CE05912;
WBGene00009918)
Candida glabrata (Cgl) cgl5186 CAGL0M12188g
Cryptococcus neoformans (Cne) cne2691 183.m01625
Dictyostelium discoideum (Ddi) ddi13117 DDB0231211
Dictyostelium discoideum (Ddi) ddi13052 DDB0231213
Debaryomyces hansenii (Dha) dha2568 DEHA0D06138g
Drosophila melanogaster (Dme) dme10551 CG7758-PA
(FBgn0027945)
Danio rerio (Dre) dre5578 ENSDARP00000004307
Escherichia coli (Eco) eco2806 16130806
Takifugu rubripes (Fru) fru19917 SINFRUP00000129950
Gallus gallus (Gga) gga4753 ENSGALP00000008728
Homo sapiens (Hsa) hsa2557 ENSP00000315716
Homo sapiens (Hsa) hsa25911 ENSP00000317647
Homo sapiens (Hsa) hsa12565 ENSP00000319531
(GCSH)
P23434
Kluyveromyces lactis (Kla) kla155 KLLA0A03597g
Mus musculus (Mmu) mmu8320 ENSMUSP00000024003
Mus musculus (Mmu) mmu26760 ENSMUSP00000037131
(MGI:1915383)
Q9CV53
Neurospora crassa (Ncr) ncr8651 NCU08877.2
Oryza sativa (Osa) osa2751 1956.m00176
Oryza sativa (Osa) osa2857 1958.m00131
Oryza sativa (Osa) osa22468 3710.m00177
Oryza sativa (Osa) osa27745 4218.m00189
Oryza sativa (Osa) osa738 903.m00124
Plasmodium falciparum (Pfa) pfa790 PF11_0339
Rattus norvegicus (Rno) rno4353 ENSRNOP00000015883
Rattus norvegicus (Rno) rno15083 ENSRNOP00000015967
(RGD:619946)
Q5I0P2
Saccharomyces cerevisiae (Sce) sce53 YAL044C
(S000000042)
Schizosaccharomyces pombe (Spo) spo1054 SPBP19A11.01 Q9HDV9
Yarrowia lipolytica (Yli) yli3867 YALI0E00242g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g35370
GO:0005739 mitochondrion C
IDA
AthAt1g32470
At2g35120
MmuMGI:1915383
SceS000000042
SpoSPBP19A11.01
ISO
MmuMGI:1915383
ISS
DmeFBgn0027945
SpoSPBP19A11.01
TAS
AthAt2g35370
GO:0005960 glycine cleavage complex C
ISA
SceS000000042
ISS
AthAt2g35120
At1g32470
DmeFBgn0027945
SpoSPBP19A11.01
GO:0009507 chloroplast C
IDA
AthAt2g35370
At1g32470
GO:0009579 thylakoid C
IDA
AthAt2g35370
GO:0004047 aminomethyltransferase activity F
ISO
MmuMGI:1915383
ISS
SpoSPBP19A11.01
GO:0004375 glycine dehydrogenase (decarboxylating)
activity
F
IMP
SceS000000042
ISA
SceS000000042
ISS
AthAt2g35120
At1g32470
SpoSPBP19A11.01
TAS
AthAt2g35370
GO:0005524 ATP binding F
IDA
AthAt2g35120
GO:0008483 transaminase activity F
ISS
SpoSPBP19A11.01
GO:0006414 translational elongation P
RCA
SceS000000042
GO:0006546 glycine catabolic process P
IMP
SceS000000042
ISS
AthAt2g35120
At1g32470
DmeFBgn0027945
SpoSPBP19A11.01
GO:0006730 one-carbon metabolic process P
IGI
SceS000000042
GO:0009249 protein lipoylation P
IMP
SceS000000042
ISS
SpoSPBP19A11.01
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00009918
GO:0009853 photorespiration P
TAS
AthAt2g35370
GO:0019464 glycine decarboxylation via glycine cleavage
system
P
ISO
MmuMGI:1915383
ISS
SpoSPBP19A11.01
TAS
AthAt2g35370

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBP19A11.01
(Q9HDV9)
YAL044C
(S000000042)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000000042
SpoSPBP19A11.01
ISS
SpoSPBP19A11.01
GO:0005960 glycine cleavage complex C
ISA
SceS000000042
ISS
SpoSPBP19A11.01
GO:0004047 aminomethyltransferase activity F
ISS
SpoSPBP19A11.01
GO:0004375 glycine dehydrogenase (decarboxylating)
activity
F
IMP
SceS000000042
ISA
SceS000000042
ISS
SpoSPBP19A11.01
GO:0008483 transaminase activity F
ISS
SpoSPBP19A11.01
GO:0006414 translational elongation P
RCA
SceS000000042
GO:0006546 glycine catabolic process P
IMP
SceS000000042
ISS
SpoSPBP19A11.01
GO:0006730 one-carbon metabolic process P
IGI
SceS000000042
GO:0009249 protein lipoylation P
IMP
SceS000000042
ISS
SpoSPBP19A11.01
GO:0019464 glycine decarboxylation via glycine cleavage
system
P
ISS
SpoSPBP19A11.01

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk