YOGY Home YOGY Help

Search term: YAR002C-A

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ERP1
SGD link S000002129
Alternative ID YAR002C-A
Description Protein that forms a heterotrimeric complex with Erp2p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles
Synonyms YAR002C-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1690 -C-HYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING emp24/gp25L/p24 family of membrane trafficking proteins

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE21168
(WBGene00011606)		 GI:17569701 A4F319
Caenorhabditis elegans (Cel) CE24533
(WBGene00013360)		 GI:17566114 Q9U1Z4
Homo sapiens (Hsa) Hs14723535 GI:14723535
Homo sapiens (Hsa) Hs20541596 GI:20541596
Saccharomyces cerevisiae (Sce) YAR002c-a
(S000002129)		 GI:6319319 Q05359
Saccharomyces cerevisiae (Sce) YGL002w
(S000002970)		 GI:6321436 P53198
Saccharomyces cerevisiae (Sce) YHR110w
(S000001152)		 GI:6321902 P38819
Schizosaccharomyces pombe (Spo) SPBC16E9.09c GI:19112583 O14324


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000002970
S000002129
GO:0005783 endoplasmic reticulum C
IDA
SpoSPBC16E9.09c
GO:0005794 Golgi apparatus C
IDA
SpoSPBC16E9.09c
GO:0016021 integral to membrane C
ISM
SceS000001152
S000002970
GO:0030134 ER to Golgi transport vesicle C
IDA
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0031224 intrinsic to membrane C
RCA
SceS000002129
GO:0003674 molecular_function F
ND
SceS000002129
S000002970
S000001152
SpoSPBC16E9.09c
GO:0000003 reproduction P
IMP
CelWBGene00013360
GO:0006888 ER to Golgi vesicle-mediated transport P
IGI
SceS000002970
IPI
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0016192 vesicle-mediated transport P
ISA
SceS000001152
GO:0040011 locomotion P
IMP
CelWBGene00011606
WBGene00013360
GO:0050801 ion homeostasis P
RCA
SceS000002129

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5308

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TMED4 GI:33457308
Pan troglodytes (Ptr) TMED4 GI:114613157
Canis familiaris (Cfa) TMED4 GI:74009714
Mus musculus (Mmu) Tmed4
(MGI:1915070)		 GI:19527236 Q8R1V4
Rattus norvegicus (Rno) Tmed4 GI:27697481
Drosophila melanogaster (Dme) eca
(FBgn0069242)		 GI:28573140
Drosophila melanogaster (Dme) p24-2 GI:28573133
Anopheles gambiae (Aga) AgaP_AGAP003553 GI:158291764
Caenorhabditis elegans (Cel) Y60A3A.9
(CE24533;
WBGene00013360)		 GI:17566114 Q9U1Z4
Schizosaccharomyces pombe (Spo) SPBC16E9.09c GI:19112583 O14324
Saccharomyces cerevisiae (Sce) ERP6
(S000002970)		 GI:6321436 P53198
Saccharomyces cerevisiae (Sce) ERP1
(S000002129)		 GI:6319319 Q05359
Kluyveromyces lactis (Kla) KLLA0A08778g GI:50302895
Eremothecium gossypii (Ego) AGOS_AFL005W GI:45198514
Magnaporthe grisea (Mgr) MGG_08096 GI:39945952
Neurospora crassa (Ncr) NCU04003.1 GI:32405418


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000002970
S000002129
GO:0005783 endoplasmic reticulum C
IDA
SpoSPBC16E9.09c
GO:0005794 Golgi apparatus C
IDA
SpoSPBC16E9.09c
ISS
Dmep24-2
FBgn0069242
GO:0016021 integral to membrane C
ISM
SceS000002970
GO:0030134 ER to Golgi transport vesicle C
IDA
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0031224 intrinsic to membrane C
RCA
SceS000002129
GO:0003674 molecular_function F
ND
SceS000002129
S000002970
SpoSPBC16E9.09c
GO:0004871 signal transducer activity F
IMP
HsaTMED4
GO:0000003 reproduction P
IMP
CelWBGene00013360
GO:0002121 inter-male aggressive behavior P
IMP
DmeFBgn0069242
GO:0006888 ER to Golgi vesicle-mediated transport P
IGI
SceS000002970
IPI
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0040011 locomotion P
IMP
CelWBGene00013360
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB
cascade		 P
IMP
HsaTMED4
GO:0050801 ion homeostasis P
RCA
SceS000002129

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1208

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5993 ENSANGP00000010504
Anopheles gambiae (Aga) aga5992 ENSANGP00000026678
Ashbya gossypii (Ago) ago3188 AFL005W
Arabidopsis thaliana (Ath) ath15276 At3g29070.1
Caenorhabditis elegans (Cel) cel20195 Y60A3A.9
(CE24533;
WBGene00013360)
Candida glabrata (Cgl) cgl25 CAGL0A00627g
Candida glabrata (Cgl) cgl1653 CAGL0G00682g
Cryptococcus neoformans (Cne) cne498 163.m06239
Dictyostelium discoideum (Ddi) ddi12173 DDB0215345
Debaryomyces hansenii (Dha) dha6399 DEHA0G15756
Drosophila melanogaster (Dme) dme11758 CG33104-PA
(FBgn0069242)
Drosophila melanogaster (Dme) dme11764 CG33105-PA
(FBgn0053105)
Danio rerio (Dre) dre5293 ENSDARP00000004205
(tmed9)		 Q561X2
Danio rerio (Dre) dre15811 ENSDARP00000029376
(zgc:86755)		 Q6IQH9
Danio rerio (Dre) dre15810 ENSDARP00000033147
Takifugu rubripes (Fru) fru18766 SINFRUP00000154213
Takifugu rubripes (Fru) fru18316 SINFRUP00000161507
Gallus gallus (Gga) gga18427 ENSGALP00000025311
Gallus gallus (Gga) gga18428 ENSGALP00000025312
(LOC422906)
Homo sapiens (Hsa) hsa28553 ENSP00000289577
(TMED4)		 C9JA55
Homo sapiens (Hsa) hsa23775 ENSP00000325889
Homo sapiens (Hsa) hsa26248 ENSP00000330945
(TMED9)		 Q9BVK6
Kluyveromyces lactis (Kla) kla382 KLLA0A08778g
Mus musculus (Mmu) mmu3237 ENSMUSP00000004508
(MGI:1915070)		 Q8R1V4
Mus musculus (Mmu) mmu20584 ENSMUSP00000004943
(MGI:1914616)		 Q9D2R4
Mus musculus (Mmu) mmu7030 ENSMUSP00000075345
(MGI:1914761)		 Q9CZL0
Neurospora crassa (Ncr) ncr3883 NCU04003.2
Oryza sativa (Osa) osa37108 4970.m00184
Plasmodium falciparum (Pfa) pfa3718 PFE1340w
Rattus norvegicus (Rno) rno9880 ENSRNOP00000000040
(GI:689712)
Rattus norvegicus (Rno) rno10709 ENSRNOP00000006802
(RGD:1306319)		 B5DEM3
Rattus norvegicus (Rno) rno13001 ENSRNOP00000030668
(RGD:1307627)		 Q5I0E7
Saccharomyces cerevisiae (Sce) sce85 YAR002C-A
(S000002129)
Saccharomyces cerevisiae (Sce) sce2091 YGL002W
(S000002970)
Schizosaccharomyces pombe (Spo) spo4926 SPBC16E9.09c O14324
Yarrowia lipolytica (Yli) yli2440 YALI0C18073g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1914761
MGI:1914616
GO:0005739 mitochondrion C
IDA
SceS000002970
S000002129
GO:0005783 endoplasmic reticulum C
IDA
SpoSPBC16E9.09c
GO:0005794 Golgi apparatus C
IDA
SpoSPBC16E9.09c
ISS
DmeFBgn0053105
FBgn0069242
GO:0016020 membrane C
ISS
AthAt3g29070
PfaPFE1340w
GO:0016021 integral to membrane C
ISM
SceS000002970
GO:0030134 ER to Golgi transport vesicle C
IDA
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0031224 intrinsic to membrane C
RCA
SceS000002129
GO:0003674 molecular_function F
ND
MmuMGI:1914616
MGI:1914761
SceS000002129
S000002970
SpoSPBC16E9.09c
GO:0008320 protein transmembrane transporter
activity		 F
ISS
AthAt3g29070
GO:0000003 reproduction P
IMP
CelWBGene00013360
GO:0002121 inter-male aggressive behavior P
IMP
DmeFBgn0069242
GO:0006886 intracellular protein transport P
ISS
AthAt3g29070
GO:0006888 ER to Golgi vesicle-mediated transport P
IGI
SceS000002970
IPI
SceS000002129
ISS
SpoSPBC16E9.09c
GO:0008150 biological_process P
ND
MmuMGI:1914761
MGI:1914616
GO:0040011 locomotion P
IMP
CelWBGene00013360
GO:0050801 ion homeostasis P
RCA
SceS000002129

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk