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Search term: YAR002W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP60
SGD link S000000063
Alternative ID YAR002W
Description Subunit of the nuclear pore complex (NPC), functions to anchor Nup2p to the NPC in a process controlled by the nucleoplasmic concentration of Gsp1p-GTP; potential Cdc28p substrate; involved in telomere maintenance
Synonyms YAR002W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38329

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NUP60
(S000000063)
GI:6319318
Kluyveromyces lactis (Kla) KLLA0A08756g GI:50302893
Eremothecium gossypii (Ego) AGOS_AFL004C GI:45198515


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
TAS
SceS000000063
GO:0017056 structural constituent of nuclear
pore
F
TAS
SceS000000063
GO:0000059 protein import into nucleus, docking P
IMP
SceS000000063
IPI
SceS000000063
GO:0006403 RNA localization P
RCA
SceS000000063
GO:0006405 RNA export from nucleus P
RCA
SceS000000063
GO:0006406 mRNA export from nucleus P
RCA
SceS000000063
GO:0006611 protein export from nucleus P
RCA
SceS000000063
GO:0006913 nucleocytoplasmic transport P
IMP
SceS000000063
GO:0006997 nucleus organization P
RCA
SceS000000063
GO:0050657 nucleic acid transport P
RCA
SceS000000063
GO:0050658 RNA transport P
RCA
SceS000000063
GO:0051028 mRNA transport P
RCA
SceS000000063
GO:0051168 nuclear export P
RCA
SceS000000063
GO:0051236 establishment of RNA localization P
RCA
SceS000000063

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17623

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3189 AFL004C
Candida glabrata (Cgl) cgl1652 CAGL0G00660g
Debaryomyces hansenii (Dha) dha1982 DEHA0C12485g
Kluyveromyces lactis (Kla) kla381 KLLA0A08756g
Saccharomyces cerevisiae (Sce) sce86 YAR002W
(S000000063)
Schizosaccharomyces pombe (Spo) spo3742 SPCC285.13c O74500
Yarrowia lipolytica (Yli) yli2608 YALI0C22253g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
ISS
SpoSPCC285.13c
TAS
SceS000000063
GO:0017056 structural constituent of nuclear
pore
F
ISS
SpoSPCC285.13c
TAS
SceS000000063
GO:0000059 protein import into nucleus, docking P
IMP
SceS000000063
IPI
SceS000000063
ISS
SpoSPCC285.13c
GO:0006403 RNA localization P
RCA
SceS000000063
GO:0006405 RNA export from nucleus P
RCA
SceS000000063
GO:0006406 mRNA export from nucleus P
RCA
SceS000000063
GO:0006611 protein export from nucleus P
RCA
SceS000000063
GO:0006913 nucleocytoplasmic transport P
IMP
SceS000000063
ISS
SpoSPCC285.13c
GO:0006997 nucleus organization P
RCA
SceS000000063
GO:0050657 nucleic acid transport P
RCA
SceS000000063
GO:0050658 RNA transport P
RCA
SceS000000063
GO:0051028 mRNA transport P
RCA
SceS000000063
GO:0051168 nuclear export P
RCA
SceS000000063
GO:0051236 establishment of RNA localization P
RCA
SceS000000063

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC285.13c
(O74500)
YAR002W
(S000000063)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
ISS
SpoSPCC285.13c
TAS
SceS000000063
GO:0017056 structural constituent of nuclear
pore
F
ISS
SpoSPCC285.13c
TAS
SceS000000063
GO:0000059 protein import into nucleus, docking P
IMP
SceS000000063
IPI
SceS000000063
ISS
SpoSPCC285.13c
GO:0006403 RNA localization P
RCA
SceS000000063
GO:0006405 RNA export from nucleus P
RCA
SceS000000063
GO:0006406 mRNA export from nucleus P
RCA
SceS000000063
GO:0006611 protein export from nucleus P
RCA
SceS000000063
GO:0006913 nucleocytoplasmic transport P
IMP
SceS000000063
ISS
SpoSPCC285.13c
GO:0006997 nucleus organization P
RCA
SceS000000063
GO:0050657 nucleic acid transport P
RCA
SceS000000063
GO:0050658 RNA transport P
RCA
SceS000000063
GO:0051028 mRNA transport P
RCA
SceS000000063
GO:0051168 nuclear export P
RCA
SceS000000063
GO:0051236 establishment of RNA localization P
RCA
SceS000000063

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