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Search term: YAR007C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RFA1
SGD link S000000065
Alternative ID YAR007C
Description Subunit of heterotrimeric Replication Protein A (RPA), which is a highly conserved single-stranded DNA binding protein involved in DNA replication, repair, and recombination
Synonyms YAR007C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0851 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g25784_2 GI:15222634
Arabidopsis thaliana (Ath) At1g27810 GI:15217721
Arabidopsis thaliana (Ath) At1g34710 GI:15218737
Arabidopsis thaliana (Ath) At1g35090 GI:15219490
Arabidopsis thaliana (Ath) At1g35143 GI:15219507
Arabidopsis thaliana (Ath) At1g35920 GI:15220253
Arabidopsis thaliana (Ath) At1g35930 GI:15220266
Arabidopsis thaliana (Ath) At1g35950 GI:15220268
Arabidopsis thaliana (Ath) At1g36030 GI:15220292
Arabidopsis thaliana (Ath) At1g36510 GI:15220445
Arabidopsis thaliana (Ath) At1g39270_1 GI:15222099
Arabidopsis thaliana (Ath) At1g39350 GI:15222102
Arabidopsis thaliana (Ath) At1g39430 GI:18400393
Arabidopsis thaliana (Ath) At1g42250 GI:15223940
Arabidopsis thaliana (Ath) At1g42400_1 GI:15224016
Arabidopsis thaliana (Ath) At1g44860 GI:15219468
Arabidopsis thaliana (Ath) At1g45080 GI:15219513
Arabidopsis thaliana (Ath) At1g52950 GI:15219131
Arabidopsis thaliana (Ath) At1g64410_1 GI:15217632
Arabidopsis thaliana (Ath) At1g67623 GI:15220485
Arabidopsis thaliana (Ath) At2g05090 GI:15224469
Arabidopsis thaliana (Ath) At2g05480 GI:15224544
Arabidopsis thaliana (Ath) At2g05570_2 GI:15224563
Arabidopsis thaliana (Ath) At2g05860 GI:15224998
Arabidopsis thaliana (Ath) At2g05880 GI:15225002
Arabidopsis thaliana (Ath) At2g05890 GI:15225003
Arabidopsis thaliana (Ath) At2g06510 GI:15225129
Arabidopsis thaliana (Ath) At2g06610 GI:15225143
Arabidopsis thaliana (Ath) At2g06690 GI:15225575
Arabidopsis thaliana (Ath) At2g07300 GI:15225696
Arabidopsis thaliana (Ath) At2g07320_3 GI:15225698
Arabidopsis thaliana (Ath) At2g07630 GI:15226034
Arabidopsis thaliana (Ath) At2g09960 GI:15226671
Arabidopsis thaliana (Ath) At2g10370 GI:15226749
Arabidopsis thaliana (Ath) At2g10460 GI:15226774
Arabidopsis thaliana (Ath) At2g10465 GI:15226775
Arabidopsis thaliana (Ath) At2g10500 GI:15226797
Arabidopsis thaliana (Ath) At2g10840 GI:15227332
Arabidopsis thaliana (Ath) At2g11150 GI:15227406
Arabidopsis thaliana (Ath) At2g11170_2 GI:15227408
Arabidopsis thaliana (Ath) At2g11360 GI:15227445
Arabidopsis thaliana (Ath) At2g11490 GI:15227464
Arabidopsis thaliana (Ath) At2g12140 GI:15224358
Arabidopsis thaliana (Ath) At2g14330_1 GI:15225641
Arabidopsis thaliana (Ath) At2g14450 GI:15225940
Arabidopsis thaliana (Ath) At2g14780 GI:15226004
Arabidopsis thaliana (Ath) At2g16010 GI:15226658
Arabidopsis thaliana (Ath) At2g16160 GI:15226700
Arabidopsis thaliana (Ath) At2g16330 GI:15227179
Arabidopsis thaliana (Ath) At2g24900 GI:15224640
Arabidopsis thaliana (Ath) At2g35280 GI:15226946
Arabidopsis thaliana (Ath) At3g13260 GI:15231182
Arabidopsis thaliana (Ath) At3g13270 GI:15231183
Arabidopsis thaliana (Ath) At3g28110_2 GI:15232903
Arabidopsis thaliana (Ath) At3g30150 GI:15230112
Arabidopsis thaliana (Ath) At3g30310 GI:15230743
Arabidopsis thaliana (Ath) At3g30430 GI:15230776
Arabidopsis thaliana (Ath) At3g30500 GI:15230794
Arabidopsis thaliana (Ath) At3g30550 GI:15230799
Arabidopsis thaliana (Ath) At3g31930 GI:18406769
Arabidopsis thaliana (Ath) At3g31990 GI:15231997
Arabidopsis thaliana (Ath) At3g32100 GI:15232031
Arabidopsis thaliana (Ath) At3g32260 GI:15232092
Arabidopsis thaliana (Ath) At3g32270 GI:15232094
Arabidopsis thaliana (Ath) At3g42110 GI:15228455
Arabidopsis thaliana (Ath) At3g42400 GI:15228536
Arabidopsis thaliana (Ath) At3g42410 GI:15228539
Arabidopsis thaliana (Ath) At3g42420_1 GI:15228541
Arabidopsis thaliana (Ath) At3g42440 GI:15228546
Arabidopsis thaliana (Ath) At3g42460 GI:15228550
Arabidopsis thaliana (Ath) At3g42500 GI:15228565
Arabidopsis thaliana (Ath) At3g42620 GI:15229122
Arabidopsis thaliana (Ath) At3g42760 GI:15229150
Arabidopsis thaliana (Ath) At3g42980 GI:15229196
Arabidopsis thaliana (Ath) At3g43040 GI:15229206
Arabidopsis thaliana (Ath) At3g43100 GI:15229218
Arabidopsis thaliana (Ath) At3g43370 GI:15229275
Arabidopsis thaliana (Ath) At3g45350 GI:15230675
Arabidopsis thaliana (Ath) At4g03640 GI:15236358
Arabidopsis thaliana (Ath) At4g03660 GI:15236361
Arabidopsis thaliana (Ath) At4g05570 GI:18412967
Arabidopsis thaliana (Ath) At4g07310 GI:18412978
Arabidopsis thaliana (Ath) At4g07340 GI:18412984
Arabidopsis thaliana (Ath) At4g07430 GI:18413002
Arabidopsis thaliana (Ath) At4g07440 GI:18413004
Arabidopsis thaliana (Ath) At4g07450 GI:18413006
Arabidopsis thaliana (Ath) At4g07480 GI:15235726
Arabidopsis thaliana (Ath) At4g07510 GI:15235732
Arabidopsis thaliana (Ath) At4g07690 GI:15235797
Arabidopsis thaliana (Ath) At4g07790 GI:15235832
Arabidopsis thaliana (Ath) At4g08890_2 GI:15236639
Arabidopsis thaliana (Ath) At4g09400_1 GI:15233858
Arabidopsis thaliana (Ath) At4g19130 GI:15234149
Arabidopsis thaliana (Ath) At4g19300 GI:15234218
Arabidopsis thaliana (Ath) At5g08020 GI:15241489
Arabidopsis thaliana (Ath) At5g27480 GI:15240943
Arabidopsis thaliana (Ath) At5g28940 GI:18421285
Arabidopsis thaliana (Ath) At5g28980_1 GI:15242005
Arabidopsis thaliana (Ath) At5g32202 GI:15242665
Arabidopsis thaliana (Ath) At5g33200 GI:15242758
Arabidopsis thaliana (Ath) At5g33240 GI:15242763
Arabidopsis thaliana (Ath) At5g34450 GI:15242832
Arabidopsis thaliana (Ath) At5g34460 GI:15242833
Arabidopsis thaliana (Ath) At5g34950 GI:15242900
Arabidopsis thaliana (Ath) At5g34960_1 GI:15242901
Arabidopsis thaliana (Ath) At5g35040 GI:15238365
Arabidopsis thaliana (Ath) At5g35250 GI:15238446
Arabidopsis thaliana (Ath) At5g35260 GI:15238447
Arabidopsis thaliana (Ath) At5g35280 GI:15238449
Arabidopsis thaliana (Ath) At5g36050 GI:15239279
Arabidopsis thaliana (Ath) At5g36734 GI:15239395
Arabidopsis thaliana (Ath) At5g36830 GI:15239395
Arabidopsis thaliana (Ath) At5g37080 GI:15240105
Arabidopsis thaliana (Ath) At5g37090 GI:15240107
Arabidopsis thaliana (Ath) At5g37100 GI:15240109
Arabidopsis thaliana (Ath) At5g45400 GI:15242405
Arabidopsis thaliana (Ath) At5g61000 GI:15239494
Caenorhabditis elegans (Cel) CE02842 GI:17535423
Caenorhabditis elegans (Cel) CE02843 GI:17535425
Caenorhabditis elegans (Cel) CE04405
(WBGene00017546)		 GI:17533299 Q19537
Caenorhabditis elegans (Cel) CE29512
(WBGene00019495)		 GI:17534959 O16689
Drosophila melanogaster (Dme) 7299003 GI:7299003
Drosophila melanogaster (Dme) 7299004
(FBgn0010173)		 GI:17737841
Homo sapiens (Hsa) Hs22068507 GI:22068507
Homo sapiens (Hsa) Hs4506583
(RPA1)		 GI:4506583 P27694
Saccharomyces cerevisiae (Sce) YAR007c
(S000000065)		 GI:6319321 P22336
Schizosaccharomyces pombe (Spo) SPBC660.13c GI:19111884 Q92372
Encephalitozoon cuniculi (Ecu) ECU10g0600 GI:19074669 Q8SR55
Arabidopsis thaliana (Ath) At1g25784_2 GI:15222634
Arabidopsis thaliana (Ath) At1g27810 GI:15217721
Arabidopsis thaliana (Ath) At1g34710 GI:15218737
Arabidopsis thaliana (Ath) At1g35090 GI:15219490
Arabidopsis thaliana (Ath) At1g35143 GI:15219507
Arabidopsis thaliana (Ath) At1g35920 GI:15220253
Arabidopsis thaliana (Ath) At1g35930 GI:15220266
Arabidopsis thaliana (Ath) At1g35950 GI:15220268
Arabidopsis thaliana (Ath) At1g36030 GI:15220292
Arabidopsis thaliana (Ath) At1g36510 GI:15220445
Arabidopsis thaliana (Ath) At1g39270_1 GI:15222099
Arabidopsis thaliana (Ath) At1g39350 GI:15222102
Arabidopsis thaliana (Ath) At1g39430 GI:18400393
Arabidopsis thaliana (Ath) At1g42250 GI:15223940
Arabidopsis thaliana (Ath) At1g42400_1 GI:15224016
Arabidopsis thaliana (Ath) At1g44860 GI:15219468
Arabidopsis thaliana (Ath) At1g45080 GI:15219513
Arabidopsis thaliana (Ath) At1g52950 GI:15219131
Arabidopsis thaliana (Ath) At1g64410_1 GI:15217632
Arabidopsis thaliana (Ath) At1g67623 GI:15220485
Arabidopsis thaliana (Ath) At2g05090 GI:15224469
Arabidopsis thaliana (Ath) At2g05480 GI:15224544
Arabidopsis thaliana (Ath) At2g05570_2 GI:15224563
Arabidopsis thaliana (Ath) At2g05860 GI:15224998
Arabidopsis thaliana (Ath) At2g05880 GI:15225002
Arabidopsis thaliana (Ath) At2g05890 GI:15225003
Arabidopsis thaliana (Ath) At2g06510 GI:15225129
Arabidopsis thaliana (Ath) At2g06610 GI:15225143
Arabidopsis thaliana (Ath) At2g06690 GI:15225575
Arabidopsis thaliana (Ath) At2g07300 GI:15225696
Arabidopsis thaliana (Ath) At2g07320_3 GI:15225698
Arabidopsis thaliana (Ath) At2g07630 GI:15226034
Arabidopsis thaliana (Ath) At2g09960 GI:15226671
Arabidopsis thaliana (Ath) At2g10370 GI:15226749
Arabidopsis thaliana (Ath) At2g10460 GI:15226774
Arabidopsis thaliana (Ath) At2g10465 GI:15226775
Arabidopsis thaliana (Ath) At2g10500 GI:15226797
Arabidopsis thaliana (Ath) At2g10840 GI:15227332
Arabidopsis thaliana (Ath) At2g11150 GI:15227406
Arabidopsis thaliana (Ath) At2g11170_2 GI:15227408
Arabidopsis thaliana (Ath) At2g11360 GI:15227445
Arabidopsis thaliana (Ath) At2g11490 GI:15227464
Arabidopsis thaliana (Ath) At2g12140 GI:15224358
Arabidopsis thaliana (Ath) At2g14330_1 GI:15225641
Arabidopsis thaliana (Ath) At2g14450 GI:15225940
Arabidopsis thaliana (Ath) At2g14780 GI:15226004
Arabidopsis thaliana (Ath) At2g16010 GI:15226658
Arabidopsis thaliana (Ath) At2g16160 GI:15226700
Arabidopsis thaliana (Ath) At2g16330 GI:15227179
Arabidopsis thaliana (Ath) At2g24900 GI:15224640
Arabidopsis thaliana (Ath) At2g35280 GI:15226946
Arabidopsis thaliana (Ath) At3g13260 GI:15231182
Arabidopsis thaliana (Ath) At3g13270 GI:15231183
Arabidopsis thaliana (Ath) At3g28110_2 GI:15232903
Arabidopsis thaliana (Ath) At3g30150 GI:15230112
Arabidopsis thaliana (Ath) At3g30310 GI:15230743
Arabidopsis thaliana (Ath) At3g30430 GI:15230776
Arabidopsis thaliana (Ath) At3g30500 GI:15230794
Arabidopsis thaliana (Ath) At3g30550 GI:15230799
Arabidopsis thaliana (Ath) At3g31930 GI:18406769
Arabidopsis thaliana (Ath) At3g31990 GI:15231997
Arabidopsis thaliana (Ath) At3g32100 GI:15232031
Arabidopsis thaliana (Ath) At3g32260 GI:15232092
Arabidopsis thaliana (Ath) At3g32270 GI:15232094
Arabidopsis thaliana (Ath) At3g42110 GI:15228455
Arabidopsis thaliana (Ath) At3g42400 GI:15228536
Arabidopsis thaliana (Ath) At3g42410 GI:15228539
Arabidopsis thaliana (Ath) At3g42420_1 GI:15228541
Arabidopsis thaliana (Ath) At3g42440 GI:15228546
Arabidopsis thaliana (Ath) At3g42460 GI:15228550
Arabidopsis thaliana (Ath) At3g42500 GI:15228565
Arabidopsis thaliana (Ath) At3g42620 GI:15229122
Arabidopsis thaliana (Ath) At3g42760 GI:15229150
Arabidopsis thaliana (Ath) At3g42980 GI:15229196
Arabidopsis thaliana (Ath) At3g43040 GI:15229206
Arabidopsis thaliana (Ath) At3g43100 GI:15229218
Arabidopsis thaliana (Ath) At3g43370 GI:15229275
Arabidopsis thaliana (Ath) At3g45350 GI:15230675
Arabidopsis thaliana (Ath) At4g03640 GI:15236358
Arabidopsis thaliana (Ath) At4g03660 GI:15236361
Arabidopsis thaliana (Ath) At4g05570 GI:18412967
Arabidopsis thaliana (Ath) At4g07310 GI:18412978
Arabidopsis thaliana (Ath) At4g07340 GI:18412984
Arabidopsis thaliana (Ath) At4g07430 GI:18413002
Arabidopsis thaliana (Ath) At4g07440 GI:18413004
Arabidopsis thaliana (Ath) At4g07450 GI:18413006
Arabidopsis thaliana (Ath) At4g07480 GI:15235726
Arabidopsis thaliana (Ath) At4g07510 GI:15235732
Arabidopsis thaliana (Ath) At4g07690 GI:15235797
Arabidopsis thaliana (Ath) At4g07790 GI:15235832
Arabidopsis thaliana (Ath) At4g08890_2 GI:15236639
Arabidopsis thaliana (Ath) At4g09400_1 GI:15233858
Arabidopsis thaliana (Ath) At4g19130 GI:15234149
Arabidopsis thaliana (Ath) At4g19300 GI:15234218
Arabidopsis thaliana (Ath) At5g08020 GI:15241489
Arabidopsis thaliana (Ath) At5g27480 GI:15240943
Arabidopsis thaliana (Ath) At5g28940 GI:18421285
Arabidopsis thaliana (Ath) At5g28980_1 GI:15242005
Arabidopsis thaliana (Ath) At5g32202 GI:15242665
Arabidopsis thaliana (Ath) At5g33200 GI:15242758
Arabidopsis thaliana (Ath) At5g33240 GI:15242763
Arabidopsis thaliana (Ath) At5g34450 GI:15242832
Arabidopsis thaliana (Ath) At5g34460 GI:15242833
Arabidopsis thaliana (Ath) At5g34950 GI:15242900
Arabidopsis thaliana (Ath) At5g34960_1 GI:15242901
Arabidopsis thaliana (Ath) At5g35040 GI:15238365
Arabidopsis thaliana (Ath) At5g35250 GI:15238446
Arabidopsis thaliana (Ath) At5g35260 GI:15238447
Arabidopsis thaliana (Ath) At5g35280 GI:15238449
Arabidopsis thaliana (Ath) At5g36050 GI:15239279
Arabidopsis thaliana (Ath) At5g36734 GI:15239395
Arabidopsis thaliana (Ath) At5g36830 GI:15239395
Arabidopsis thaliana (Ath) At5g37080 GI:15240105
Arabidopsis thaliana (Ath) At5g37090 GI:15240107
Arabidopsis thaliana (Ath) At5g37100 GI:15240109
Arabidopsis thaliana (Ath) At5g45400 GI:15242405
Arabidopsis thaliana (Ath) At5g61000 GI:15239494
Caenorhabditis elegans (Cel) CE02842 GI:17535423
Caenorhabditis elegans (Cel) CE02843 GI:17535425
Caenorhabditis elegans (Cel) CE04405
(WBGene00017546)		 GI:17533299 Q19537
Caenorhabditis elegans (Cel) CE29512
(WBGene00019495)		 GI:17534959 O16689
Drosophila melanogaster (Dme) 7299003 GI:7299003
Drosophila melanogaster (Dme) 7299004
(FBgn0010173)		 GI:17737841
Homo sapiens (Hsa) Hs22068507 GI:22068507
Homo sapiens (Hsa) Hs4506583
(RPA1)		 GI:4506583 P27694
Saccharomyces cerevisiae (Sce) YAR007c
(S000000065)		 GI:6319321 P22336
Schizosaccharomyces pombe (Spo) SPBC660.13c GI:19111884 Q92372
Encephalitozoon cuniculi (Ecu) ECU10g0600 GI:19074669 Q8SR55


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000000065
ISS
SpoSPBC660.13c
GO:0000790 nuclear chromatin C
IDA
AthAt2g06510
GO:0000794 condensed nuclear chromosome C
IDA
SceS000000065
GO:0005575 cellular_component C
ND
AthAt2g35280
At1g36030
At1g52950
At1g36510
At1g67623
At3g32260
At3g30430
GO:0005634 nucleus C
IDA
CelWBGene00017546
DmeFBgn0010173
HsaRPA1
SpoSPBC660.13c
ISS
SpoSPBC660.13c
NAS
DmeFBgn0010173
GO:0005654 nucleoplasm C
EXP
HsaRPA1
GO:0005662 DNA replication factor A complex C
IDA
DmeFBgn0010173
SceS000000065
SpoSPBC660.13c
IPI
HsaRPA1
NAS
DmeFBgn0010173
GO:0005737 cytoplasm C
IDA
HsaRPA1
SceS000000065
SpoSPBC660.13c
ISS
SpoSPBC660.13c
GO:0005829 cytosol C
IDA
SpoSPBC660.13c
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0010173
GO:0015629 actin cytoskeleton C
IDA
HsaRPA1
GO:0016605 PML body C
IDA
HsaRPA1
GO:0003674 molecular_function F
ND
AthAt1g36510
At3g32100
At1g52950
At3g30430
At2g35280
At1g36030
At3g32260
At1g67623
GO:0003690 double-stranded DNA binding F
IDA
SceS000000065
GO:0003697 single-stranded DNA binding F
IDA
DmeFBgn0010173
SceS000000065
SpoSPBC660.13c
NAS
DmeFBgn0010173
GO:0005515 protein binding F
IPI
HsaRPA1
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000065
GO:0000003 reproduction P
IMP
CelWBGene00019495
GO:0000718 nucleotide-excision repair, DNA damage
removal		 P
EXP
HsaRPA1
GO:0000722 telomere maintenance via recombination P
IGI
SceS000000065
GO:0000723 telomere maintenance P
IGI
SpoSPBC660.13c
IMP
SpoSPBC660.13c
GO:0000724 double-strand break repair via homologous
recombination		 P
IGI
SceS000000065
ISS
SpoSPBC660.13c
GO:0002119 nematode larval development P
IMP
CelWBGene00019495
GO:0006260 DNA replication P
EXP
HsaRPA1
IMP
SceS000000065
ISS
AthAt2g06510
At5g08020
At5g45400
At5g61000
RCA
SceS000000065
GO:0006261 DNA-dependent DNA replication P
IDA
DmeFBgn0010173
IMP
SpoSPBC660.13c
NAS
DmeFBgn0010173
TAS
HsaRPA1
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000000065
GO:0006269 DNA replication, synthesis of RNA
primer		 P
ISS
SpoSPBC660.13c
GO:0006281 DNA repair P
IMP
SceS000000065
SpoSPBC660.13c
RCA
SceS000000065
TAS
AthAt5g08020
GO:0006289 nucleotide-excision repair P
IDA
SceS000000065
GO:0006297 nucleotide-excision repair, DNA gap
filling		 P
EXP
HsaRPA1
GO:0006312 mitotic recombination P
IMP
SceS000000065
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017546
GO:0006974 response to DNA damage stimulus P
RCA
SceS000000065
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000000065
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010173
GO:0007131 reciprocal meiotic recombination P
IGI
AthAt2g06510
IMP
SceS000000065
GO:0007141 male meiosis I P
IMP
AthAt2g06510
GO:0008150 biological_process P
ND
AthAt1g52950
At1g36030
At2g35280
At1g36510
At3g30430
At1g67623
At3g32260
At3g32100
GO:0009555 pollen development P
IMP
AthAt2g06510
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017546
WBGene00019495
GO:0010171 body morphogenesis P
IMP
CelWBGene00019495
GO:0010224 response to UV-B P
IMP
AthAt5g08020
GO:0016567 protein ubiquitination P
IMP
SceS000000065
IPI
SceS000000065
GO:0018991 oviposition P
IMP
CelWBGene00019495
GO:0019915 lipid storage P
IMP
CelWBGene00019495
GO:0030491 heteroduplex formation P
IDA
SceS000000065
GO:0040007 growth P
IMP
CelWBGene00019495
GO:0040011 locomotion P
IMP
CelWBGene00019495
GO:0045184 establishment of protein localization P
IPI
SceS000000065
GO:0048232 male gamete generation P
IMP
AthAt2g06510
GO:0051026 chiasma assembly P
IMP
AthAt2g06510
GO:0051321 meiotic cell cycle P
RCA
SceS000000065

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2208

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPA1 GI:4506583 P27694
Pan troglodytes (Ptr) RPA1 GI:114665746
Canis familiaris (Cfa) RPA1 GI:73967218
Mus musculus (Mmu) Rpa1
(MGI:1915525)		 GI:18390321 Q3U8B3
Rattus norvegicus (Rno) Rpa1
(RGD:1307376)		 GI:109488520
Gallus gallus (Gga) RPA1 GI:57525314
Drosophila melanogaster (Dme) RpA-70
(FBgn0010173)		 GI:17737841
Anopheles gambiae (Aga) AgaP_AGAP001421 GI:158302076
Schizosaccharomyces pombe (Spo) rad11 GI:19111884
Saccharomyces cerevisiae (Sce) RFA1
(S000000065)		 GI:6319321 P22336
Kluyveromyces lactis (Kla) KLLA0A08844g GI:50302901
Eremothecium gossypii (Ego) AGOS_AFL008W GI:45198511
Magnaporthe grisea (Mgr) MGG_00685 GI:39974337
Neurospora crassa (Ncr) NCU03606.1 GI:32404590
Arabidopsis thaliana (Ath) AT4G19130 GI:186512039
Arabidopsis thaliana (Ath) AT5G45400 GI:15242405
Oryza sativa (Osa) Os05g0111000 GI:115461691


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000000065
GO:0000793 condensed chromosome C
IDA
MmuMGI:1915525
GO:0000794 condensed nuclear chromosome C
IDA
MmuMGI:1915525
SceS000000065
GO:0001673 male germ cell nucleus C
IDA
MmuMGI:1915525
GO:0005634 nucleus C
IDA
DmeFBgn0010173
HsaRPA1
MmuMGI:1915525
NAS
DmeFBgn0010173
GO:0005654 nucleoplasm C
EXP
HsaRPA1
GO:0005662 DNA replication factor A complex C
IDA
DmeFBgn0010173
SceS000000065
IPI
HsaRPA1
ISO
MmuMGI:1915525
NAS
DmeFBgn0010173
GO:0005737 cytoplasm C
IDA
HsaRPA1
SceS000000065
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0010173
GO:0015629 actin cytoskeleton C
IDA
HsaRPA1
GO:0016605 PML body C
IDA
HsaRPA1
ISO
MmuMGI:1915525
GO:0003682 chromatin binding F
IDA
MmuMGI:1915525
GO:0003690 double-stranded DNA binding F
IDA
SceS000000065
GO:0003697 single-stranded DNA binding F
IDA
DmeFBgn0010173
SceS000000065
ISO
MmuMGI:1915525
NAS
DmeFBgn0010173
GO:0005515 protein binding F
IPI
HsaRPA1
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000065
GO:0000718 nucleotide-excision repair, DNA damage
removal		 P
EXP
HsaRPA1
GO:0000722 telomere maintenance via recombination P
IGI
SceS000000065
GO:0000724 double-strand break repair via homologous
recombination		 P
IGI
SceS000000065
IMP
MmuMGI:1915525
GO:0001701 in utero embryonic development P
IMP
MmuMGI:1915525
GO:0006260 DNA replication P
EXP
HsaRPA1
IMP
SceS000000065
ISS
AthAt5g45400
RCA
SceS000000065
GO:0006261 DNA-dependent DNA replication P
IDA
DmeFBgn0010173
NAS
DmeFBgn0010173
TAS
HsaRPA1
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000000065
GO:0006281 DNA repair P
IMP
SceS000000065
RCA
SceS000000065
GO:0006289 nucleotide-excision repair P
IDA
SceS000000065
GO:0006297 nucleotide-excision repair, DNA gap
filling		 P
EXP
HsaRPA1
GO:0006312 mitotic recombination P
IMP
SceS000000065
GO:0006974 response to DNA damage stimulus P
RCA
SceS000000065
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000000065
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010173
GO:0007126 meiosis P
IDA
MmuMGI:1915525
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000000065
GO:0008284 positive regulation of cell proliferation P
IMP
MmuMGI:1915525
GO:0016567 protein ubiquitination P
IMP
SceS000000065
IPI
SceS000000065
GO:0030097 hemopoiesis P
IMP
MmuMGI:1915525
GO:0030491 heteroduplex formation P
IDA
SceS000000065
GO:0045184 establishment of protein localization P
IPI
SceS000000065
GO:0048873 homeostasis of number of cells within a
tissue		 P
IMP
MmuMGI:1915525
GO:0051276 chromosome organization P
IMP
MmuMGI:1915525
GO:0051321 meiotic cell cycle P
RCA
SceS000000065

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1106

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3507 ENSANGP00000015823
Ashbya gossypii (Ago) ago3185 AFL008W
Arabidopsis thaliana (Ath) ath8007 At2g06510.1
Arabidopsis thaliana (Ath) ath8008 At2g06510.2
Arabidopsis thaliana (Ath) ath19800 At4g19130.1
Arabidopsis thaliana (Ath) ath23015 At5g08020.1
Arabidopsis thaliana (Ath) ath26389 At5g45400.1
Arabidopsis thaliana (Ath) ath28189 At5g61000.1
Caenorhabditis elegans (Cel) cel6627 F18A1.5
(CE04405;
WBGene00017546)
Candida glabrata (Cgl) cgl1655 CAGL0G00726g
Cryptococcus neoformans (Cne) cne609 163.m02748
Dictyostelium discoideum (Ddi) ddi8157 DDB0188462
Debaryomyces hansenii (Dha) dha304 DEHA0A06875g
Drosophila melanogaster (Dme) dme11481 CG9633-PA
(FBgn0010173)
Danio rerio (Dre) dre13749 ENSDARP00000013938
(rpa1)		 Q803R4
Encephalitozoon cuniculi (Ecu) ecu585 19074669
Takifugu rubripes (Fru) fru1942 SINFRUP00000148081
Takifugu rubripes (Fru) fru1941 SINFRUP00000148084
Takifugu rubripes (Fru) fru6469 SINFRUP00000162950
Gallus gallus (Gga) gga8863 ENSGALP00000004840
(RPA1)		 Q5ZJJ2
Gallus gallus (Gga) gga8864 ENSGALP00000004842
Gallus gallus (Gga) gga8865 ENSGALP00000004843
Homo sapiens (Hsa) hsa12778 ENSP00000254719
(RPA1)		 P27694
Kluyveromyces lactis (Kla) kla385 KLLA0A08844g
Mus musculus (Mmu) mmu4234 ENSMUSP00000000767
(MGI:1915525)		 Q3U8B3
Neurospora crassa (Ncr) ncr3497 NCU03606.2
Oryza sativa (Osa) osa7442 2517.m00081
Oryza sativa (Osa) osa14438 2965.m00180
Oryza sativa (Osa) osa45981 5513.m00154
Oryza sativa (Osa) osa73859 7281.m00087
Oryza sativa (Osa) osa73934 7283.m00106
Plasmodium falciparum (Pfa) pfa3220 PFD0470c
Rattus norvegicus (Rno) rno5563 ENSRNOP00000004229
(RGD:1307376)		 Q7TP21
Saccharomyces cerevisiae (Sce) sce88 YAR007C
(S000000065)
Schizosaccharomyces pombe (Spo) spo457 SPBC660.13c Q92372
Yarrowia lipolytica (Yli) yli4506 YALI0E15642g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000000065
ISS
SpoSPBC660.13c
GO:0000790 nuclear chromatin C
IDA
AthAt2g06510
GO:0000793 condensed chromosome C
IDA
MmuMGI:1915525
GO:0000794 condensed nuclear chromosome C
IDA
MmuMGI:1915525
SceS000000065
GO:0001673 male germ cell nucleus C
IDA
MmuMGI:1915525
GO:0005634 nucleus C
IDA
CelWBGene00017546
DmeFBgn0010173
MmuMGI:1915525
SpoSPBC660.13c
ISS
SpoSPBC660.13c
NAS
DmeFBgn0010173
GO:0005662 DNA replication factor A complex C
IDA
DmeFBgn0010173
SceS000000065
SpoSPBC660.13c
ISO
MmuMGI:1915525
ISS
PfaPFD0470c
NAS
DmeFBgn0010173
GO:0005737 cytoplasm C
IDA
SceS000000065
SpoSPBC660.13c
ISS
SpoSPBC660.13c
GO:0005829 cytosol C
IDA
SpoSPBC660.13c
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0010173
GO:0016605 PML body C
ISO
MmuMGI:1915525
GO:0003682 chromatin binding F
IDA
MmuMGI:1915525
GO:0003690 double-stranded DNA binding F
IDA
SceS000000065
GO:0003697 single-stranded DNA binding F
IDA
DmeFBgn0010173
SceS000000065
SpoSPBC660.13c
ISO
MmuMGI:1915525
NAS
DmeFBgn0010173
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000065
GO:0000722 telomere maintenance via recombination P
IGI
SceS000000065
GO:0000723 telomere maintenance P
IGI
SpoSPBC660.13c
IMP
SpoSPBC660.13c
GO:0000724 double-strand break repair via homologous
recombination		 P
IGI
SceS000000065
IMP
MmuMGI:1915525
ISS
SpoSPBC660.13c
GO:0001701 in utero embryonic development P
IMP
MmuMGI:1915525
GO:0006260 DNA replication P
IMP
SceS000000065
ISS
AthAt2g06510
At5g08020
At5g45400
At5g61000
PfaPFD0470c
RCA
SceS000000065
GO:0006261 DNA-dependent DNA replication P
IDA
DmeFBgn0010173
IMP
SpoSPBC660.13c
ISS
PfaPFD0470c
NAS
DmeFBgn0010173
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000000065
GO:0006269 DNA replication, synthesis of RNA
primer		 P
ISS
SpoSPBC660.13c
GO:0006281 DNA repair P
IMP
SceS000000065
SpoSPBC660.13c
RCA
SceS000000065
TAS
AthAt5g08020
GO:0006289 nucleotide-excision repair P
IDA
SceS000000065
GO:0006312 mitotic recombination P
IMP
SceS000000065
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00017546
GO:0006974 response to DNA damage stimulus P
RCA
SceS000000065
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000000065
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010173
GO:0007126 meiosis P
IDA
MmuMGI:1915525
GO:0007131 reciprocal meiotic recombination P
IGI
AthAt2g06510
IMP
SceS000000065
GO:0007141 male meiosis I P
IMP
AthAt2g06510
GO:0008284 positive regulation of cell proliferation P
IMP
MmuMGI:1915525
GO:0009555 pollen development P
IMP
AthAt2g06510
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017546
GO:0010224 response to UV-B P
IMP
AthAt5g08020
GO:0016567 protein ubiquitination P
IMP
SceS000000065
IPI
SceS000000065
GO:0030097 hemopoiesis P
IMP
MmuMGI:1915525
GO:0030491 heteroduplex formation P
IDA
SceS000000065
GO:0045184 establishment of protein localization P
IPI
SceS000000065
GO:0048232 male gamete generation P
IMP
AthAt2g06510
GO:0048873 homeostasis of number of cells within a
tissue		 P
IMP
MmuMGI:1915525
GO:0051026 chiasma assembly P
IMP
AthAt2g06510
GO:0051276 chromosome organization P
IMP
MmuMGI:1915525
GO:0051321 meiotic cell cycle P
RCA
SceS000000065

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC660.13c
(Q92372)		 YAR007C
(S000000065)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IMP
SceS000000065
ISS
SpoSPBC660.13c
GO:0000794 condensed nuclear chromosome C
IDA
SceS000000065
GO:0005634 nucleus C
IDA
SpoSPBC660.13c
ISS
SpoSPBC660.13c
GO:0005662 DNA replication factor A complex C
IDA
SceS000000065
SpoSPBC660.13c
GO:0005737 cytoplasm C
IDA
SceS000000065
SpoSPBC660.13c
ISS
SpoSPBC660.13c
GO:0005829 cytosol C
IDA
SpoSPBC660.13c
GO:0003690 double-stranded DNA binding F
IDA
SceS000000065
GO:0003697 single-stranded DNA binding F
IDA
SceS000000065
SpoSPBC660.13c
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000065
GO:0000722 telomere maintenance via recombination P
IGI
SceS000000065
GO:0000723 telomere maintenance P
IGI
SpoSPBC660.13c
IMP
SpoSPBC660.13c
GO:0000724 double-strand break repair via homologous
recombination		 P
IGI
SceS000000065
ISS
SpoSPBC660.13c
GO:0006260 DNA replication P
IMP
SceS000000065
RCA
SceS000000065
GO:0006261 DNA-dependent DNA replication P
IMP
SpoSPBC660.13c
GO:0006268 DNA unwinding involved in replication P
IDA
SceS000000065
GO:0006269 DNA replication, synthesis of RNA
primer		 P
ISS
SpoSPBC660.13c
GO:0006281 DNA repair P
IMP
SceS000000065
SpoSPBC660.13c
RCA
SceS000000065
GO:0006289 nucleotide-excision repair P
IDA
SceS000000065
GO:0006312 mitotic recombination P
IMP
SceS000000065
GO:0006974 response to DNA damage stimulus P
RCA
SceS000000065
GO:0007004 telomere maintenance via telomerase P
IPI
SceS000000065
GO:0007131 reciprocal meiotic recombination P
IMP
SceS000000065
GO:0016567 protein ubiquitination P
IMP
SceS000000065
IPI
SceS000000065
GO:0030491 heteroduplex formation P
IDA
SceS000000065
GO:0045184 establishment of protein localization P
IPI
SceS000000065
GO:0051321 meiotic cell cycle P
RCA
SceS000000065

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