YOGY Home YOGY Help

Search term: YBL002W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HTB2
SGD link S000000098
Alternative ID YBL002W
Description Histone H2B, core histone protein required for chromatin assembly and chromosome function; nearly identical to HTB1; Rad6p-Bre1p-Lge1p mediated ubiquitination regulates transcriptional activation, meiotic DSB formation and H3 methylation
Synonyms YBL002W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1744 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Histone H2B

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g07790 GI:15223016
Arabidopsis thaliana (Ath) At1g08170_2 GI:15223150
Arabidopsis thaliana (Ath) At2g28720 GI:15226943
Arabidopsis thaliana (Ath) At2g37470 GI:15224292
Arabidopsis thaliana (Ath) At3g09480 GI:15232689
Arabidopsis thaliana (Ath) At3g45980 GI:15231304
Arabidopsis thaliana (Ath) At3g46030 GI:15231313
Arabidopsis thaliana (Ath) At3g53650 GI:15231854
Arabidopsis thaliana (Ath) At5g02570 GI:15241858
Arabidopsis thaliana (Ath) At5g22880 GI:15237148
Arabidopsis thaliana (Ath) At5g59910 GI:15238563
Caenorhabditis elegans (Cel) CE05165A GI:17538224 Q27876
Caenorhabditis elegans (Cel) CE05165B GI:17538224 Q27876
Caenorhabditis elegans (Cel) CE05165C GI:17538224 Q27876
Caenorhabditis elegans (Cel) CE05165D GI:17538224 Q27876
Caenorhabditis elegans (Cel) CE05470
(WBGene00001915)		 GI:17558794 Q27484
Caenorhabditis elegans (Cel) CE07075A GI:17532989 P04255
Caenorhabditis elegans (Cel) CE07075B GI:17532989 P04255
Caenorhabditis elegans (Cel) CE07075C GI:17532989 P04255
Caenorhabditis elegans (Cel) CE07075D GI:17532989 P04255
Caenorhabditis elegans (Cel) CE07075E GI:17532989 P04255
Caenorhabditis elegans (Cel) CE10520 GI:17562020
Caenorhabditis elegans (Cel) CE10538A GI:17561996 Q27894
Caenorhabditis elegans (Cel) CE10538B GI:17561996 Q27894
Caenorhabditis elegans (Cel) CE10538C GI:17561996 Q27894
Caenorhabditis elegans (Cel) CE16386
(WBGene00001878)		 GI:17561988 Q27894
Caenorhabditis elegans (Cel) CE26800A GI:17559286
Caenorhabditis elegans (Cel) CE26800B GI:17559286
Drosophila melanogaster (Dme) 7289077 GI:7289077
Homo sapiens (Hsa) Hs10800138
(HIST1H2BD)		 GI:10800138 P58876
Homo sapiens (Hsa) Hs10800140
(HIST1H2BB)		 GI:10800140 P33778
Homo sapiens (Hsa) Hs11036646 GI:11036646
Homo sapiens (Hsa) Hs16306566
(HIST1H2BO)		 GI:16306566 P23527
Homo sapiens (Hsa) Hs17450917 GI:17450917
Homo sapiens (Hsa) Hs17450921 GI:17450921
Homo sapiens (Hsa) Hs17485635 GI:17485635
Homo sapiens (Hsa) Hs17485639 GI:17485639
Homo sapiens (Hsa) Hs17486583 GI:17486583
Homo sapiens (Hsa) Hs18105048
(HIST1H2BK)		 GI:18105048 O60814
Homo sapiens (Hsa) Hs18545927 GI:18545927
Homo sapiens (Hsa) Hs18545939 GI:18545939
Homo sapiens (Hsa) Hs18561623 GI:18561623
Homo sapiens (Hsa) Hs18596243_2 GI:18596243
Homo sapiens (Hsa) Hs18596433 GI:18596433
Homo sapiens (Hsa) Hs18596463 GI:18596463
Homo sapiens (Hsa) Hs20336754
(HIST1H2BJ)		 GI:20336754 P06899
Homo sapiens (Hsa) Hs20548375 GI:20548375
Homo sapiens (Hsa) Hs20553889 GI:20553889
Homo sapiens (Hsa) Hs20554709 GI:20554709
Homo sapiens (Hsa) Hs22042805 GI:22042805
Homo sapiens (Hsa) Hs22042961 GI:20345515
Homo sapiens (Hsa) Hs22060696 GI:15020500 Q96A08
Homo sapiens (Hsa) Hs4504257
(HIST1H2BG)		 GI:4504257 P62807
Homo sapiens (Hsa) Hs4504259
(HIST1H2BL)		 GI:4504259 Q99880
Homo sapiens (Hsa) Hs4504261
(HIST1H2BN)		 GI:4504261 Q99877
Homo sapiens (Hsa) Hs4504263
(HIST1H2BM)		 GI:4504263 Q99879
Homo sapiens (Hsa) Hs4504269
(HIST1H2BH)		 GI:4504269 Q93079
Homo sapiens (Hsa) Hs4504277
(HIST2H2BE)		 GI:4504277 Q16778
Homo sapiens (Hsa) HsM4504267 GI:4504267
Homo sapiens (Hsa) HsM4504273 GI:4504273
Saccharomyces cerevisiae (Sce) YBL002w
(S000000098)		 GI:6319471 P02294
Saccharomyces cerevisiae (Sce) YDR224c
(S000002632)		 GI:6320430 P02293
Schizosaccharomyces pombe (Spo) SPCC622.09 GI:19075681 P04913
Encephalitozoon cuniculi (Ecu) ECU08g0410 GI:19173367 Q8SRE2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
HsaHIST1H2BB
HIST1H2BO
HIST1H2BJ
HIST1H2BL
HIST1H2BN
HIST1H2BM
HIST1H2BH
HIST2H2BE
GO:0000788 nuclear nucleosome C
IDA
SceS000002632
TAS
SceS000000098
GO:0005634 nucleus C
IDA
AthAt5g22880
SpoSPCC622.09
GO:0005730 nucleolus C
IDA
AthAt5g02570
At3g45980
At5g22880
At5g59910
GO:0009507 chloroplast C
IDA
AthAt1g07790
GO:0031298 replication fork protection complex C
IDA
SceS000002632
S000000098
GO:0003677 DNA binding F
IDA
SceS000002632
ISS
AthAt1g08170
At5g02570
At3g09480
At5g59910
At3g53650
At2g37470
At1g07790
At3g46030
At5g22880
At2g28720
At3g45980
NAS
HsaHIST1H2BB
HIST1H2BO
HIST1H2BJ
HIST1H2BL
HIST1H2BM
HIST1H2BN
HIST1H2BH
HIST2H2BE
TAS
SceS000000098
GO:0005515 protein binding F
IPI
HsaHIST2H2BE
GO:0000003 reproduction P
IMP
CelWBGene00001915
GO:0002119 nematode larval development P
IMP
CelWBGene00001915
GO:0006301 postreplication repair P
IGI
SceS000002632
GO:0006333 chromatin assembly or disassembly P
IDA
SceS000002632
TAS
SceS000000098
GO:0006334 nucleosome assembly P
NAS
HsaHIST1H2BO
HIST1H2BB
HIST1H2BJ
HIST1H2BM
HIST1H2BL
HIST1H2BN
HIST1H2BH
HIST2H2BE
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001915
GO:0016481 negative regulation of transcription P
RCA
SceS000000098
GO:0040007 growth P
IMP
CelWBGene00001915
GO:0040011 locomotion P
IMP
CelWBGene00001915
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global		 P
IMP
SceS000002632
GO:0045941 positive regulation of transcription P
RCA
SceS000002632

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
121736

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) HIST1H2BH GI:4504269 Q93079
Homo sapiens (Hsa) HIST1H2BO GI:16306566 P23527
Pan troglodytes (Ptr) LOC471888 GI:114605944
Pan troglodytes (Ptr) LOC746513 GI:114559176
Pan troglodytes (Ptr) LOC471880 GI:55626044
Pan troglodytes (Ptr) LOC471883 GI:55626048
Pan troglodytes (Ptr) LOC462491 GI:114605942
Pan troglodytes (Ptr) LOC462509 GI:114606051
Pan troglodytes (Ptr) LOC463172 GI:114605790
Canis familiaris (Cfa) LOC488309 GI:74012717
Mus musculus (Mmu) Hist1h2bh
(MGI:2448387)		 GI:30061387 Q64478
Rattus norvegicus (Rno) Hist1h2bl
(RGD:621439)		 GI:12025526
Gallus gallus (Gga) LOC429558 GI:50771389
Schizosaccharomyces pombe (Spo) htb1
(SPCC622.09)		 GI:19075681 P04913
Saccharomyces cerevisiae (Sce) HTB1
(S000002632)		 GI:6320430 P02293
Saccharomyces cerevisiae (Sce) HTB2
(S000000098)		 GI:6319471 P02294
Kluyveromyces lactis (Kla) KLLA0E17391g GI:50309447
Kluyveromyces lactis (Kla) KLLA0F13310g GI:50311309
Eremothecium gossypii (Ego) AGOS_AGR183C GI:45201279
Magnaporthe grisea (Mgr) MGG_03578 GI:39942996
Neurospora crassa (Ncr) NCU02435.1 GI:32421535
Arabidopsis thaliana (Ath) AT5G02570 GI:15241858
Arabidopsis thaliana (Ath) AT2G37470 GI:15224292
Arabidopsis thaliana (Ath) AT3G53650 GI:15231854
Arabidopsis thaliana (Ath) AT3G09480 GI:15232689
Plasmodium falciparum (Pfa) PF07_0054 GI:124511826


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000786 nucleosome C
NAS
HsaHIST1H2BO
HIST1H2BH
GO:0000788 nuclear nucleosome C
IDA
SceS000002632
TAS
SceS000000098
GO:0005634 nucleus C
IDA
SpoSPCC622.09
GO:0005730 nucleolus C
IDA
AthAt5g02570
GO:0031298 replication fork protection complex C
IDA
SceS000002632
S000000098
GO:0003677 DNA binding F
IDA
SceS000002632
ISS
AthAt5g02570
At3g09480
At3g53650
At2g37470
NAS
HsaHIST1H2BO
HIST1H2BH
TAS
SceS000000098
GO:0006301 postreplication repair P
IGI
SceS000002632
GO:0006333 chromatin assembly or disassembly P
IDA
SceS000002632
TAS
SceS000000098
GO:0006334 nucleosome assembly P
NAS
HsaHIST1H2BO
HIST1H2BH
GO:0016481 negative regulation of transcription P
RCA
SceS000000098
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global		 P
IMP
SceS000002632
GO:0045941 positive regulation of transcription P
RCA
SceS000002632

Back to the top