YOGY Home YOGY Help

Search term: YBL014C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRN6
SGD link S000000110
Alternative ID YBL014C
Description Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p
Synonyms YBL014C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38371

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRN6
(S000000110)
GI:6319457
Kluyveromyces lactis (Kla) KLLA0E10659g GI:50308855
Eremothecium gossypii (Ego) AGOS_AFR484C GI:45199002


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000000110
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000000110
IMP
SceS000000110
GO:0010843 promoter binding F
NAS
SceS000000110
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000000110
IMP
SceS000000110
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000000110
GO:0006364 rRNA processing P
RCA
SceS000000110
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000000110

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24646

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3676 AFR484C
Candida glabrata (Cgl) cgl1068 CAGL0E02893g
Debaryomyces hansenii (Dha) dha2901 DEHA0D13508g
Kluyveromyces lactis (Kla) kla3431 KLLA0E10659g
Saccharomyces cerevisiae (Sce) sce139 YBL014C
(S000000110)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000000110
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000000110
IMP
SceS000000110
GO:0010843 promoter binding F
NAS
SceS000000110
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000000110
IMP
SceS000000110
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000000110
GO:0006364 rRNA processing P
RCA
SceS000000110
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000000110

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC3B8.11
(O59719)
YBL014C
(S000000110)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000120 RNA polymerase I transcription factor
complex
C
ISS
SpoSPBC3B8.11
GO:0005634 nucleus C
IDA
SpoSPBC3B8.11
GO:0005829 cytosol C
IDA
SpoSPBC3B8.11
GO:0070860 RNA polymerase I core factor complex C
IDA
SceS000000110
GO:0003701 RNA polymerase I transcription factor
activity
F
IDA
SceS000000110
IMP
SceS000000110
ISS
SpoSPBC3B8.11
GO:0010843 promoter binding F
NAS
SceS000000110
GO:0006360 transcription from RNA polymerase I
promoter
P
IDA
SceS000000110
IMP
SceS000000110
ISS
SpoSPBC3B8.11
GO:0006361 transcription initiation from RNA polymerase I
promoter
P
NAS
SceS000000110
GO:0006364 rRNA processing P
RCA
SceS000000110
GO:0042790 transcription of nuclear rRNA large RNA polymerase
I transcript
P
IGI
SceS000000110

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk