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Search term: YBL033C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RIB1
SGD link S000000129
Alternative ID YBL033C
Description GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway
Synonyms YBL033C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1284 A---YP-

KOGs classification KOGs description
METABOLISM Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g22450 GI:15227217
Arabidopsis thaliana (Ath) At5g59750 GI:15238513
Arabidopsis thaliana (Ath) At5g64300 GI:15237660
Saccharomyces cerevisiae (Sce) YBL033c
(S000000129)		 GI:6319438 P38066
Saccharomyces cerevisiae (Sce) YDR487c
(S000002895)		 GI:6320695 Q99258
Schizosaccharomyces pombe (Spo) SPAC1002.19 GI:19114420 Q9US41
Schizosaccharomyces pombe (Spo) SPAP27G11.09c GI:19114325 Q9P7M9
Schizosaccharomyces pombe (Spo) SPBC23E6.06c GI:19113398 O60181


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000129
SpoSPBC23E6.06c
SPAC1002.19
SPAP27G11.09c
ISS
SpoSPAP27G11.09c
GO:0005737 cytoplasm C
IDA
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0005758 mitochondrial intermembrane space C
IDA
SceS000002895
ISS
SpoSPBC23E6.06c
GO:0005829 cytosol C
IDA
SceS000002895
SpoSPBC23E6.06c
SPAC1002.19
SPAP27G11.09c
ISS
SpoSPBC23E6.06c
GO:0009507 chloroplast C
IDA
AthAt5g64300
At5g59750
At2g22450
GO:0016020 membrane C
IDA
AthAt5g64300
GO:0003935 GTP cyclohydrolase II activity F
IGI
AthAt5g64300
ISS
AthAt5g64300
At5g59750
At2g22450
SpoSPAP27G11.09c
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase
activity		 F
IGI
AthAt5g64300
IMP
SceS000002895
ISS
AthAt2g22450
At5g64300
At5g59750
SpoSPBC23E6.06c
GO:0019238 cyclohydrolase activity F
IGI
SceS000000129
IMP
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0006082 organic acid metabolic process P
RCA
SceS000002895
GO:0006414 translational elongation P
RCA
SceS000002895
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000002895
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000002895
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002895
GO:0009060 aerobic respiration P
IMP
SceS000002895
GO:0009231 riboflavin biosynthetic process P
IGI
AthAt5g64300
IMP
SceS000000129
S000002895
ISS
AthAt5g64300
At5g59750
At2g22450
SpoSPBC23E6.06c
SPAP27G11.09c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5337

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAP27G11.09c GI:19114325 Q9P7M9
Saccharomyces cerevisiae (Sce) RIB1
(S000000129)		 GI:6319438 P38066
Kluyveromyces lactis (Kla) KLLA0B12375g GI:50304263
Eremothecium gossypii (Ego) AGOS_ADL296C GI:45187577
Magnaporthe grisea (Mgr) MGG_10689 GI:39971337
Neurospora crassa (Ncr) NCU07188.1 GI:32413989


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000129
SpoSPAP27G11.09c
ISS
SpoSPAP27G11.09c
GO:0005737 cytoplasm C
IDA
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.09c
GO:0003935 GTP cyclohydrolase II activity F
ISS
SpoSPAP27G11.09c
GO:0019238 cyclohydrolase activity F
IGI
SceS000000129
IMP
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0009231 riboflavin biosynthetic process P
IMP
SceS000000129
ISS
SpoSPAP27G11.09c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1074

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1445 ADL296C
Ashbya gossypii (Ago) ago1859 ADR118C
Arabidopsis thaliana (Ath) ath9139 At2g22450.1
Arabidopsis thaliana (Ath) ath28044 At5g59750.1
Arabidopsis thaliana (Ath) ath28562 At5g64300.1
Candida glabrata (Cgl) cgl1415 CAGL0F04279g
Candida glabrata (Cgl) cgl2848 CAGL0I07557g
Cryptococcus neoformans (Cne) cne2926 167.m03212
Cryptococcus neoformans (Cne) cne2282 181.m08305
Debaryomyces hansenii (Dha) dha594 DEHA0A13299g
Debaryomyces hansenii (Dha) dha6156 DEHA0G10329g
Escherichia coli (Eco) eco1240 16129238
Escherichia coli (Eco) eco2939 16130937
Kluyveromyces lactis (Kla) kla873 KLLA0B07755g
Kluyveromyces lactis (Kla) kla1079 KLLA0B12375g
Neurospora crassa (Ncr) ncr5815 NCU05983.2
Neurospora crassa (Ncr) ncr6994 NCU07188.2
Oryza sativa (Osa) osa28085 4188.m00136
Oryza sativa (Osa) osa30626 4352.m00186
Oryza sativa (Osa) osa32724 4472.m00241
Oryza sativa (Osa) osa52498 5938.m00102
Oryza sativa (Osa) osa80042 7458.m00127
Saccharomyces cerevisiae (Sce) sce159 YBL033C
(S000000129)
Saccharomyces cerevisiae (Sce) sce1553 YDR487C
(S000002895)
Schizosaccharomyces pombe (Spo) spo2132 SPAP27G11.09c Q9P7M9
Schizosaccharomyces pombe (Spo) spo3754 SPBC23E6.06c O60181
Yarrowia lipolytica (Yli) yli1107 YALI0B08965g
Yarrowia lipolytica (Yli) yli3955 YALI0E02288g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000129
SpoSPBC23E6.06c
SPAP27G11.09c
ISS
SpoSPAP27G11.09c
GO:0005737 cytoplasm C
IDA
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0005758 mitochondrial intermembrane space C
IDA
SceS000002895
ISS
SpoSPBC23E6.06c
GO:0005829 cytosol C
IDA
SceS000002895
SpoSPBC23E6.06c
SPAP27G11.09c
ISS
SpoSPBC23E6.06c
GO:0009507 chloroplast C
IDA
AthAt5g64300
At5g59750
At2g22450
GO:0016020 membrane C
IDA
AthAt5g64300
GO:0003935 GTP cyclohydrolase II activity F
IGI
AthAt5g64300
ISS
AthAt5g64300
At5g59750
At2g22450
SpoSPAP27G11.09c
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase
activity		 F
IGI
AthAt5g64300
IMP
SceS000002895
ISS
AthAt2g22450
At5g64300
At5g59750
SpoSPBC23E6.06c
GO:0019238 cyclohydrolase activity F
IGI
SceS000000129
IMP
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0006082 organic acid metabolic process P
RCA
SceS000002895
GO:0006414 translational elongation P
RCA
SceS000002895
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000002895
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000002895
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002895
GO:0009060 aerobic respiration P
IMP
SceS000002895
GO:0009231 riboflavin biosynthetic process P
IGI
AthAt5g64300
IMP
SceS000000129
S000002895
ISS
AthAt5g64300
At5g59750
At2g22450
SpoSPBC23E6.06c
SPAP27G11.09c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAP27G11.09c
(Q9P7M9)		 YBL033C
(S000000129)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000129
SpoSPAP27G11.09c
ISS
SpoSPAP27G11.09c
GO:0005737 cytoplasm C
IDA
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0005829 cytosol C
IDA
SpoSPAP27G11.09c
GO:0003935 GTP cyclohydrolase II activity F
ISS
SpoSPAP27G11.09c
GO:0019238 cyclohydrolase activity F
IGI
SceS000000129
IMP
SceS000000129
ISS
SpoSPAP27G11.09c
GO:0009231 riboflavin biosynthetic process P
IMP
SceS000000129
ISS
SpoSPAP27G11.09c

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GO info in one table:

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