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Search term: YBL051C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PIN4
SGD link S000000147
Alternative ID YBL051C
Description Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p; contains an RNA recognition motif, a nuclear localization signal, and several SQ/TQ cluster domains; hyperphosphorylated in response to DNA damage
Synonyms YBL051C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0108 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING mRNA cleavage and polyadenylation factor I complex, subunit RNA15

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g71800 GI:15217577
Caenorhabditis elegans (Cel) CE16126
(WBGene00000774)		 GI:17553656 O45577
Caenorhabditis elegans (Cel) CE16307
(WBGene00011155)		 GI:17508585 O45712
Caenorhabditis elegans (Cel) CE16308
(WBGene00011156)		 GI:17508587 O45713
Caenorhabditis elegans (Cel) CE16399
(WBGene00011730)		 GI:17555352 O45781
Caenorhabditis elegans (Cel) CE18119
(WBGene00011059)		 GI:17508567 O62337
Drosophila melanogaster (Dme) 7300420 GI:7300420
Homo sapiens (Hsa) Hs14149675
(CSTF2T)		 GI:14149675 Q9H0L4
Homo sapiens (Hsa) Hs4557493
(CSTF2)		 GI:4557493 P33240
Saccharomyces cerevisiae (Sce) YBL051c
(S000000147)		 GI:6319420 P34217
Saccharomyces cerevisiae (Sce) YGL044c
(S000003012)		 GI:6321394 P25299
Saccharomyces cerevisiae (Sce) YGR156w
(S000003388)		 GI:6321595 P39927
Saccharomyces cerevisiae (Sce) YGR250c GI:6321689 P53316
Schizosaccharomyces pombe (Spo) SPAC12G12.03 GI:19113807 Q09868
Schizosaccharomyces pombe (Spo) SPAC644.16 GI:19114796 Q9P6P7
Schizosaccharomyces pombe (Spo) SPBC16A3.18 GI:19113563 O42923
Schizosaccharomyces pombe (Spo) SPBC3B9.11c GI:19113461 O43040
Encephalitozoon cuniculi (Ecu) ECU08g0380 GI:19173364 Q8SRE5
Arabidopsis thaliana (Ath) At1g71800 GI:15217577
Caenorhabditis elegans (Cel) CE16126
(WBGene00000774)		 GI:17553656 O45577
Caenorhabditis elegans (Cel) CE16307
(WBGene00011155)		 GI:17508585 O45712
Caenorhabditis elegans (Cel) CE16308
(WBGene00011156)		 GI:17508587 O45713
Caenorhabditis elegans (Cel) CE16399
(WBGene00011730)		 GI:17555352 O45781
Caenorhabditis elegans (Cel) CE18119
(WBGene00011059)		 GI:17508567 O62337
Drosophila melanogaster (Dme) 7300420 GI:7300420
Homo sapiens (Hsa) Hs14149675
(CSTF2T)		 GI:14149675 Q9H0L4
Homo sapiens (Hsa) Hs4557493
(CSTF2)		 GI:4557493 P33240
Saccharomyces cerevisiae (Sce) YBL051c
(S000000147)		 GI:6319420 P34217
Saccharomyces cerevisiae (Sce) YGL044c
(S000003012)		 GI:6321394 P25299
Saccharomyces cerevisiae (Sce) YGR156w
(S000003388)		 GI:6321595 P39927
Saccharomyces cerevisiae (Sce) YGR250c GI:6321689 P53316
Schizosaccharomyces pombe (Spo) SPAC12G12.03 GI:19113807 Q09868
Schizosaccharomyces pombe (Spo) SPAC644.16 GI:19114796 Q9P6P7
Schizosaccharomyces pombe (Spo) SPBC16A3.18 GI:19113563 O42923
Schizosaccharomyces pombe (Spo) SPBC3B9.11c GI:19113461 O43040
Encephalitozoon cuniculi (Ecu) ECU08g0380 GI:19173364 Q8SRE5
Arabidopsis thaliana (Ath) At1g71800 GI:15217577
Caenorhabditis elegans (Cel) CE16126
(WBGene00000774)		 GI:17553656 O45577
Caenorhabditis elegans (Cel) CE16307
(WBGene00011155)		 GI:17508585 O45712
Caenorhabditis elegans (Cel) CE16308
(WBGene00011156)		 GI:17508587 O45713
Caenorhabditis elegans (Cel) CE16399
(WBGene00011730)		 GI:17555352 O45781
Caenorhabditis elegans (Cel) CE18119
(WBGene00011059)		 GI:17508567 O62337
Drosophila melanogaster (Dme) 7300420 GI:7300420
Homo sapiens (Hsa) Hs14149675
(CSTF2T)		 GI:14149675 Q9H0L4
Homo sapiens (Hsa) Hs4557493
(CSTF2)		 GI:4557493 P33240
Saccharomyces cerevisiae (Sce) YBL051c
(S000000147)		 GI:6319420 P34217
Saccharomyces cerevisiae (Sce) YGL044c
(S000003012)		 GI:6321394 P25299
Saccharomyces cerevisiae (Sce) YGR156w
(S000003388)		 GI:6321595 P39927
Saccharomyces cerevisiae (Sce) YGR250c GI:6321689 P53316
Schizosaccharomyces pombe (Spo) SPAC12G12.03 GI:19113807 Q09868
Schizosaccharomyces pombe (Spo) SPAC644.16 GI:19114796 Q9P6P7
Schizosaccharomyces pombe (Spo) SPBC16A3.18 GI:19113563 O42923
Schizosaccharomyces pombe (Spo) SPBC3B9.11c GI:19113461 O43040
Encephalitozoon cuniculi (Ecu) ECU08g0380 GI:19173364 Q8SRE5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g71800
GO:0005622 intracellular C
IDA
HsaCSTF2T
GO:0005634 nucleus C
IDA
HsaCSTF2
SceS000003388
SpoSPAC644.16
SPBC3B9.11c
GO:0005737 cytoplasm C
IDA
SceS000000147
YGR250c
SpoSPAC12G12.03
SPBC16A3.18
GO:0005829 cytosol C
IDA
SpoSPAC12G12.03
SPBC16A3.18
SPBC3B9.11c
GO:0005847 mRNA cleavage and polyadenylation specificity
factor complex		 C
IDA
SpoSPBC3B9.11c
IPI
SceS000003388
GO:0005849 mRNA cleavage factor complex C
IPI
SceS000003012
ISS
SpoSPAC644.16
GO:0010494 stress granule C
IDA
SceYGR250c
GO:0016607 nuclear speck C
IDA
CelWBGene00000774
GO:0003674 molecular_function F
ND
SceS000000147
GO:0003723 RNA binding F
IC
SceS000003388
ISS
AthAt1g71800
SceYGR250c
SpoSPAC12G12.03
SPAC644.16
SPBC16A3.18
SPBC3B9.11c
RCA
SceS000000147
GO:0003729 mRNA binding F
IDA
AthAt1g71800
SceS000003012
GO:0005515 protein binding F
IPI
AthAt1g71800
HsaCSTF2
GO:0016564 transcription repressor activity F
IMP
AthAt1g71800
GO:0046982 protein heterodimerization activity F
IPI
SceS000003012
GO:0000003 reproduction P
IMP
CelWBGene00000774
GO:0000077 DNA damage checkpoint P
IGI
SceS000000147
IPI
SceS000000147
GO:0000086 G2/M transition of mitotic cell
cycle		 P
IMP
SceS000000147
GO:0006378 mRNA polyadenylation P
IC
SpoSPBC3B9.11c
IDA
SceS000003012
IMP
SceS000003388
IPI
SceS000003388
ISS
SpoSPAC644.16
TAS
HsaCSTF2
GO:0006379 mRNA cleavage P
IDA
SceS000003012
IMP
SceS000003388
IPI
SceS000003388
ISS
SpoSPAC644.16
TAS
HsaCSTF2
GO:0006414 translational elongation P
RCA
SceS000003388
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00000774
GO:0008150 biological_process P
ND
SceYGR250c
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00011730
GO:0008380 RNA splicing P
EXP
HsaCSTF2
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011156
WBGene00000774
GO:0010610 regulation of mRNA stability involved in response
to stress		 P
IMP
SpoSPAC12G12.03
SPBC16A3.18
GO:0016246 RNA interference P
IMP
CelWBGene00000774
GO:0030846 termination of RNA polymerase II transcription,
poly(A)-coupled		 P
IPI
SceS000003388
GO:0030847 termination of RNA polymerase II transcription,
poly(A)-independent		 P
IMP
SceS000003388
IPI
SceS000003388
GO:0031123 RNA 3'-end processing P
IMP
AthAt1g71800
RCA
SceS000003388
GO:0031126 snoRNA 3'-end processing P
IMP
SceS000003388
GO:0034599 cellular response to oxidative
stress		 P
IGI
SpoSPAC12G12.03
SPBC16A3.18
GO:0048589 developmental growth P
IMP
AthAt1g71800

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38357

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PIN4
(S000000147)		 GI:6319420 P34217
Kluyveromyces lactis (Kla) KLLA0E19943g GI:50309675
Eremothecium gossypii (Ego) AGOS_ACR235W GI:45185921


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000000147
GO:0003674 molecular_function F
ND
SceS000000147
GO:0003723 RNA binding F
RCA
SceS000000147
GO:0000077 DNA damage checkpoint P
IGI
SceS000000147
IPI
SceS000000147
GO:0000086 G2/M transition of mitotic cell
cycle		 P
IMP
SceS000000147

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_10430

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1282 ACR235W
Candida glabrata (Cgl) cgl177 CAGL0A04213g
Candida glabrata (Cgl) cgl2742 CAGL0I05082g
Cryptococcus neoformans (Cne) cne3456 176.m02170
Debaryomyces hansenii (Dha) dha344 DEHA0A07766g
Kluyveromyces lactis (Kla) kla3848 KLLA0E19943g
Neurospora crassa (Ncr) ncr5188 NCU05343.2
Saccharomyces cerevisiae (Sce) sce179 YBL051C
(S000000147)
Schizosaccharomyces pombe (Spo) spo1453 SPAC12G12.03 Q09868
Schizosaccharomyces pombe (Spo) spo3147 SPBC16A3.18 O42923
Yarrowia lipolytica (Yli) yli3358 YALI0D15752g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000000147
SpoSPAC12G12.03
SPBC16A3.18
GO:0005829 cytosol C
IDA
SpoSPAC12G12.03
SPBC16A3.18
GO:0003674 molecular_function F
ND
SceS000000147
GO:0003723 RNA binding F
ISS
SpoSPAC12G12.03
SPBC16A3.18
RCA
SceS000000147
GO:0000077 DNA damage checkpoint P
IGI
SceS000000147
IPI
SceS000000147
GO:0000086 G2/M transition of mitotic cell
cycle		 P
IMP
SceS000000147
GO:0010610 regulation of mRNA stability involved in response
to stress		 P
IMP
SpoSPAC12G12.03
SPBC16A3.18
GO:0034599 cellular response to oxidative
stress		 P
IGI
SpoSPAC12G12.03
SPBC16A3.18

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC12G12.03
(Q09868)		 YBL051C
(S000000147)
SPBC16A3.18
(O42923)		 YBL051C
(S000000147)