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Search term: YBL078C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ATG8
SGD link S000000174
Alternative ID YBL078C
Description Component of autophagosomes and Cvt vesicles; undergoes conjugation to phosphatidylethanolamine (PE); Atg8p-PE is anchored to membranes, is involved in phagophore expansion, and may mediate membrane fusion during autophagosome formation
Synonyms YBL078C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1654 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Microtubule-associated anchor protein involved in autophagy and membrane trafficking

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g62040 GI:15220686
Arabidopsis thaliana (Ath) At2g05630 GI:15224577
Arabidopsis thaliana (Ath) At2g45170 GI:15225418
Arabidopsis thaliana (Ath) At3g06420 GI:6437547
Arabidopsis thaliana (Ath) At3g15580 GI:18400815
Arabidopsis thaliana (Ath) At3g60640 GI:15232387
Arabidopsis thaliana (Ath) At4g04620 GI:15233593
Arabidopsis thaliana (Ath) At4g16520 GI:15235776
Arabidopsis thaliana (Ath) At4g21980 GI:11279074
Caenorhabditis elegans (Cel) CE01849
(WBGene00002980)
GI:17535125 Q09490
Caenorhabditis elegans (Cel) CE06627
(WBGene00002981)
GI:17541478 Q23536
Drosophila melanogaster (Dme) 7291184 GI:7291184
Drosophila melanogaster (Dme) 7300298 GI:7300298 Q9VEG5
Homo sapiens (Hsa) Hs14211879 GI:14211879
Homo sapiens (Hsa) Hs6005764
(GABARAP)
GI:6005764 O95166
Homo sapiens (Hsa) Hs6005768
(GABARAPL2)
GI:6005768 P60520
Homo sapiens (Hsa) Hs12383056
(MAP1LC3B)
GI:12383056 Q9GZQ8
Homo sapiens (Hsa) Hs17474837_1 GI:17474837
Homo sapiens (Hsa) Hs18573065 GI:18573065
Homo sapiens (Hsa) Hs22056111 GI:22056111
Homo sapiens (Hsa) Hs20481331 GI:20481331
Homo sapiens (Hsa) Hs20553498 GI:20553498
Homo sapiens (Hsa) Hs13899219 GI:10181206
Homo sapiens (Hsa) Hs14210522
(MAP1LC3A)
GI:14210522 Q9H492
Saccharomyces cerevisiae (Sce) YBL078c
(S000000174)
GI:6319393 P38182
Schizosaccharomyces pombe (Spo) SPBP8B7.24c GI:19113323 O94272


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000139 Golgi membrane C
ISS
HsaGABARAPL2
GO:0000407 pre-autophagosomal structure C
IDA
SceS000000174
GO:0000421 autophagic vacuole membrane C
IDA
HsaGABARAP
GABARAPL2
GO:0005622 intracellular C
IDA
HsaGABARAPL2
MAP1LC3B
GO:0005624 membrane fraction C
IDA
HsaGABARAPL2
GO:0005634 nucleus C
IDA
SpoSPBP8B7.24c
GO:0005737 cytoplasm C
IDA
AthAt4g21980
At2g45170
CelWBGene00002980
NAS
AthAt4g21980
At3g15580
GO:0005774 vacuolar membrane C
IDA
SceS000000174
IPI
SceS000000174
GO:0005775 vacuolar lumen C
NAS
AthAt4g21980
At3g15580
GO:0005776 autophagic vacuole C
IDA
AthAt2g45170
At4g21980
CelWBGene00002980
HsaMAP1LC3A
SceS000000174
ISS
HsaMAP1LC3B
SpoSPBP8B7.24c
GO:0005794 Golgi apparatus C
ISS
HsaGABARAPL2
GO:0005829 cytosol C
IDA
HsaMAP1LC3A
SceS000000174
SpoSPBP8B7.24c
ISS
HsaGABARAPL2
GO:0016020 membrane C
IDA
AthAt2g45170
GO:0019898 extrinsic to membrane C
IDA
SceS000000174
GO:0031090 organelle membrane C
IDA
HsaMAP1LC3A
ISS
HsaMAP1LC3B
GO:0000149 SNARE binding F
ISS
HsaGABARAPL2
GO:0003674 molecular_function F
ND
SceS000000174
SpoSPBP8B7.24c
GO:0005515 protein binding F
IPI
HsaGABARAP
GABARAPL2
MAP1LC3B
MAP1LC3A
GO:0005543 phospholipid binding F
IDA
HsaMAP1LC3A
GO:0008017 microtubule binding F
ISS
AthAt3g06420
At1g62040
At2g05630
At3g15580
At2g45170
At4g16520
At4g04620
At3g60640
NAS
HsaGABARAPL2
GO:0008429 phosphatidylethanolamine binding F
IDA
HsaMAP1LC3A
GO:0019776 Atg8 ligase activity F
ISS
AthAt3g15580
At4g21980
GO:0019779 APG8 activating enzyme activity F
ISS
AthAt4g21980
At3g15580
GO:0019786 APG8-specific protease activity F
ISS
AthAt4g21980
At3g15580
GO:0048487 beta-tubulin binding F
IDA
HsaGABARAP
ISS
HsaGABARAPL2
GO:0050811 GABA receptor binding F
IPI
HsaGABARAP
ISS
HsaGABARAPL2
NAS
HsaGABARAPL2
GO:0051117 ATPase binding F
ISS
HsaGABARAPL2
GO:0000003 reproduction P
IMP
CelWBGene00002980
GO:0000045 autophagic vacuole assembly P
IMP
SceS000000174
ISS
HsaMAP1LC3A
GO:0000422 mitochondrion degradation P
IMP
SceS000000174
GO:0000747 conjugation with cellular fusion P
IMP
SpoSPBP8B7.24c
GO:0006605 protein targeting P
TAS
HsaGABARAP
GO:0006888 ER to Golgi vesicle-mediated transport P
IGI
SceS000000174
IMP
SceS000000174
IPI
SceS000000174
GO:0006891 intra-Golgi vesicle-mediated transport P
ISS
HsaGABARAPL2
GO:0006914 autophagy P
IGI
CelWBGene00002980
IMP
SpoSPBP8B7.24c
ISS
AthAt2g05630
At2g45170
At3g06420
At3g15580
At1g62040
At4g16520
At4g04620
At3g60640
At4g21980
NAS
HsaGABARAPL2
RCA
SceS000000174
GO:0006944 cellular membrane fusion P
IDA
SceS000000174
IMP
SceS000000174
ISS
SpoSPBP8B7.24c
GO:0006995 cellular response to nitrogen starvation P
IMP
SpoSPBP8B7.24c
GO:0007268 synaptic transmission P
TAS
HsaGABARAP
GO:0009267 cellular response to starvation P
IEP
AthAt2g45170
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00002980
WBGene00002981
GO:0012501 programmed cell death P
IGI
CelWBGene00002980
GO:0016236 macroautophagy P
IC
SpoSPBP8B7.24c
GO:0032258 CVT pathway P
IMP
SceS000000174
ISS
SpoSPBP8B7.24c
GO:0032781 positive regulation of ATPase activity P
ISS
HsaGABARAPL2
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000000174
GO:0040024 dauer larval development P
IGI
CelWBGene00002980
GO:0042157 lipoprotein metabolic process P
RCA
SceS000000174

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
10508

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) GABARAP GI:6005764 O95166
Pan troglodytes (Ptr) GABARAP GI:114666128
Canis familiaris (Cfa) GABARAP GI:73955414
Mus musculus (Mmu) Gabarap
(MGI:1861742)
GI:9789961 Q9DCD6
Rattus norvegicus (Rno) Gabarap
(RGD:61911)
GI:25282439
Drosophila melanogaster (Dme) Atg8a
(FBgn0052672)
GI:24641085
Anopheles gambiae (Aga) AgaP_AGAP002685 GI:118782401
Caenorhabditis elegans (Cel) lgg-1
(CE01849;
WBGene00002980)
GI:17535125 Q09490
Schizosaccharomyces pombe (Spo) atg8
(SPBP8B7.24c)
GI:19113323 O94272
Saccharomyces cerevisiae (Sce) ATG8
(S000000174)
GI:6319393 P38182
Kluyveromyces lactis (Kla) KLLA0E20669g GI:50309737
Eremothecium gossypii (Ego) AGOS_AER396W GI:45190997
Magnaporthe grisea (Mgr) MGG_01062 GI:39973583
Neurospora crassa (Ncr) NCU01545.1 GI:32415009
Arabidopsis thaliana (Ath) ATG8D GI:15224577
Plasmodium falciparum (Pfa) PF10_0193 GI:124802463