YOGY Home YOGY Help

Search term: YBL079W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUP170
SGD link S000000175
Alternative ID YBL079W
Description Subunit of the nuclear pore complex (NPC), required for NPC localization of specific nucleoporins; involved in nuclear envelope permeability and chromosome segregation; has similar to Nup157p; essential role, with Nup157p, in NPC assembly
Synonyms YBL079W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1900 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g14850 GI:15223918
Caenorhabditis elegans (Cel) CE27625
(WBGene00003794)		 GI:17543314 Q95Y13
Caenorhabditis elegans (Cel) CE27626 GI:17543312
Drosophila melanogaster (Dme) 7297801
(FBgn0021761)		 GI:17316372 Q9V463
Homo sapiens (Hsa) Hs4758844 GI:4758844 O75694
Saccharomyces cerevisiae (Sce) YBL079w
(S000000175)		 GI:6319392 P38181
Saccharomyces cerevisiae (Sce) YER105c
(S000000907)		 GI:6320952 P40064
Schizosaccharomyces pombe (Spo) SPAC890.06 GI:19115736 Q9URX8
Encephalitozoon cuniculi (Ecu) ECU06g0470 GI:19074297 Q8SRR8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
DmeFBgn0021761
GO:0005635 nuclear envelope C
IDA
DmeFBgn0021761
SpoSPAC890.06
GO:0005643 nuclear pore C
IDA
SceS000000175
S000000907
ISS
AthAt1g14850
DmeFBgn0021761
SpoSPAC890.06
NAS
DmeFBgn0021761
GO:0005730 nucleolus C
IDA
AthAt1g14850
GO:0005737 cytoplasm C
IDA
SpoSPAC890.06
GO:0005886 plasma membrane C
IDA
AthAt1g14850
GO:0009507 chloroplast C
IDA
AthAt1g14850
GO:0031015 karyopherin docking complex C
IDA
SceS000000175
GO:0003674 molecular_function F
ND
SpoSPAC890.06
GO:0005198 structural molecule activity F
TAS
SceS000000907
S000000175
GO:0005487 nucleocytoplasmic transporter activity F
ISS
AthAt1g14850
GO:0000003 reproduction P
IMP
CelWBGene00003794
GO:0000059 protein import into nucleus, docking P
IPI
SceS000000175
GO:0002119 nematode larval development P
IMP
CelWBGene00003794
GO:0006406 mRNA export from nucleus P
IMP
SceS000000907
TAS
SceS000000907
S000000175
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC890.06
TAS
SceS000000907
S000000175
GO:0006408 snRNA export from nucleus P
TAS
SceS000000907
S000000175
GO:0006409 tRNA export from nucleus P
TAS
SceS000000907
S000000175
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000000907
S000000175
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000000907
S000000175
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000000907
S000000175
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000000175
S000000907
GO:0006611 protein export from nucleus P
TAS
SceS000000907
S000000175
GO:0006612 protein targeting to membrane P
IMP
SceS000000175
GO:0006913 nucleocytoplasmic transport P
IC
SpoSPAC890.06
ISS
AthAt1g14850
GO:0006997 nucleus organization P
IMP
CelWBGene00003794
GO:0006999 nuclear pore organization P
TAS
SceS000000907
S000000175
GO:0007059 chromosome segregation P
IMP
SceS000000175
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003794
GO:0040007 growth P
IMP
CelWBGene00003794
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003794
GO:0045184 establishment of protein localization P
RCA
SceS000000907
S000000175
GO:0051292 nuclear pore complex assembly P
IGI
SceS000000175
S000000907

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
43155

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) NUP155 GI:24430149
Pan troglodytes (Ptr) NUP155 GI:114600531
Canis familiaris (Cfa) NUP155 GI:73954311
Mus musculus (Mmu) Nup155
(MGI:2181182)		 GI:31559998 Q3UL43
Rattus norvegicus (Rno) Nup155
(RGD:621199)		 GI:16758834
Gallus gallus (Gga) NUP155 GI:118103730
Drosophila melanogaster (Dme) Nup154
(FBgn0021761)		 GI:17316372 Q9V463
Anopheles gambiae (Aga) AgaP_AGAP007999 GI:158297195
Caenorhabditis elegans (Cel) npp-8
(CE27625;
WBGene00003794)		 GI:71997016
Schizosaccharomyces pombe (Spo) SPAC890.06 GI:19115736 Q9URX8
Saccharomyces cerevisiae (Sce) NUP170
(S000000175)		 GI:6319392 P38181
Kluyveromyces lactis (Kla) KLLA0E20691g GI:50309739
Eremothecium gossypii (Ego) AGOS_AER397C GI:45190998
Magnaporthe grisea (Mgr) MGG_05095 GI:39940290
Neurospora crassa (Ncr) NCU04463.1 GI:32406406
Arabidopsis thaliana (Ath) NUP155 GI:30684028
Oryza sativa (Osa) Os06g0305200 GI:115467738


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
DmeFBgn0021761
GO:0005635 nuclear envelope C
EXP
HsaNUP155
IDA
DmeFBgn0021761
SpoSPAC890.06
GO:0005643 nuclear pore C
IDA
SceS000000175
ISS
DmeFBgn0021761
SpoSPAC890.06
NAS
DmeFBgn0021761
GO:0005737 cytoplasm C
IDA
SpoSPAC890.06
GO:0031015 karyopherin docking complex C
IDA
SceS000000175
GO:0003674 molecular_function F
ND
SpoSPAC890.06
GO:0005198 structural molecule activity F
TAS
SceS000000175
GO:0005215 transporter activity F
TAS
HsaNUP155
GO:0005515 protein binding F
IPI
HsaNUP155
MmuMGI:2181182
GO:0000003 reproduction P
IMP
CelWBGene00003794
GO:0000059 protein import into nucleus, docking P
IPI
SceS000000175
GO:0002119 nematode larval development P
IMP
CelWBGene00003794
GO:0006406 mRNA export from nucleus P
TAS
SceS000000175
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC890.06
TAS
SceS000000175
GO:0006408 snRNA export from nucleus P
TAS
SceS000000175
GO:0006409 tRNA export from nucleus P
TAS
SceS000000175
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000000175
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000000175
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000000175
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000000175
GO:0006611 protein export from nucleus P
TAS
SceS000000175
GO:0006612 protein targeting to membrane P
IMP
SceS000000175
GO:0006913 nucleocytoplasmic transport P
IC
SpoSPAC890.06
GO:0006997 nucleus organization P
IMP
CelWBGene00003794
GO:0006999 nuclear pore organization P
TAS
SceS000000175
GO:0007059 chromosome segregation P
IMP
SceS000000175
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003794
GO:0040007 growth P
IMP
CelWBGene00003794
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003794
GO:0045184 establishment of protein localization P
RCA
SceS000000175
GO:0051292 nuclear pore complex assembly P
IGI
SceS000000175

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2628

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga9975 ENSANGP00000012304
Ashbya gossypii (Ago) ago2897 AER397C
Arabidopsis thaliana (Ath) ath1578 At1g14850.1
Caenorhabditis elegans (Cel) cel18718 Y41D4B.19a
(CE27625;
WBGene00003794)
Caenorhabditis elegans (Cel) cel18719 Y41D4B.19b
(CE33869)
Candida glabrata (Cgl) cgl1770 CAGL0G03355g
Cryptococcus neoformans (Cne) cne777 163.m03921
Dictyostelium discoideum (Ddi) ddi10208 DDB0189286
Debaryomyces hansenii (Dha) dha2513 DEHA0D04796g
Drosophila melanogaster (Dme) dme1948 CG4579-PA
(FBgn0021761)
Drosophila melanogaster (Dme) dme1949 CG4579-PB
(FBgn0021761)
Danio rerio (Dre) dre23570 ENSDARP00000007708
(nup155)		 Q7ZW07
Encephalitozoon cuniculi (Ecu) ecu1524 19074297
Takifugu rubripes (Fru) fru11435 SINFRUP00000170191
Gallus gallus (Gga) gga28328 ENSGALP00000005831
Gallus gallus (Gga) gga28329 ENSGALP00000005832
(NUP155)
Gallus gallus (Gga) gga28330 ENSGALP00000005833
Homo sapiens (Hsa) hsa25146 ENSP00000231498
(NUP155)		 O75694-1
Kluyveromyces lactis (Kla) kla3881 KLLA0E20691g
Mus musculus (Mmu) mmu8741 ENSMUSP00000022742
(MGI:2181182)		 Q99P88
Neurospora crassa (Ncr) ncr9955 NCU10279.2
Oryza sativa (Osa) osa65691 6766.m00139
Rattus norvegicus (Rno) rno15616 ENSRNOP00000019606
(RGD:621199)		 P37199
Rattus norvegicus (Rno) rno15617 ENSRNOP00000042749
(RGD:621199)
Saccharomyces cerevisiae (Sce) sce211 YBL079W
(S000000175)
Saccharomyces cerevisiae (Sce) sce1842 YER105C
(S000000907)
Schizosaccharomyces pombe (Spo) spo204 SPAC890.06 Q9URX8
Yarrowia lipolytica (Yli) yli3972 YALI0E02706g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
DmeFBgn0021761
GO:0005635 nuclear envelope C
IDA
DmeFBgn0021761
SpoSPAC890.06
GO:0005643 nuclear pore C
IDA
SceS000000175
S000000907
ISS
AthAt1g14850
DmeFBgn0021761
SpoSPAC890.06
NAS
DmeFBgn0021761
GO:0005730 nucleolus C
IDA
AthAt1g14850
GO:0005737 cytoplasm C
IDA
SpoSPAC890.06
GO:0005886 plasma membrane C
IDA
AthAt1g14850
GO:0009507 chloroplast C
IDA
AthAt1g14850
GO:0031015 karyopherin docking complex C
IDA
SceS000000175
GO:0003674 molecular_function F
ND
SpoSPAC890.06
GO:0005198 structural molecule activity F
TAS
SceS000000907
S000000175
GO:0005487 nucleocytoplasmic transporter activity F
ISS
AthAt1g14850
GO:0005515 protein binding F
IPI
MmuMGI:2181182
GO:0000003 reproduction P
IMP
CelWBGene00003794
GO:0000059 protein import into nucleus, docking P
IPI
SceS000000175
GO:0002119 nematode larval development P
IMP
CelWBGene00003794
GO:0006406 mRNA export from nucleus P
IMP
SceS000000907
TAS
SceS000000907
S000000175
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC890.06
TAS
SceS000000907
S000000175
GO:0006408 snRNA export from nucleus P
TAS
SceS000000907
S000000175
GO:0006409 tRNA export from nucleus P
TAS
SceS000000907
S000000175
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000000907
S000000175
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000000907
S000000175
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000000907
S000000175
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000000175
S000000907
GO:0006611 protein export from nucleus P
TAS
SceS000000907
S000000175
GO:0006612 protein targeting to membrane P
IMP
SceS000000175
GO:0006913 nucleocytoplasmic transport P
IC
SpoSPAC890.06
ISS
AthAt1g14850
GO:0006997 nucleus organization P
IMP
CelWBGene00003794
GO:0006999 nuclear pore organization P
TAS
SceS000000907
S000000175
GO:0007059 chromosome segregation P
IMP
SceS000000175
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003794
GO:0040007 growth P
IMP
CelWBGene00003794
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003794
GO:0045184 establishment of protein localization P
RCA
SceS000000907
S000000175
GO:0051292 nuclear pore complex assembly P
IGI
SceS000000175
S000000907

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC890.06
(Q9URX8)		 YBL079W
(S000000175)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SpoSPAC890.06
GO:0005643 nuclear pore C
IDA
SceS000000175
ISS
SpoSPAC890.06
GO:0005737 cytoplasm C
IDA
SpoSPAC890.06
GO:0031015 karyopherin docking complex C
IDA
SceS000000175
GO:0003674 molecular_function F
ND
SpoSPAC890.06
GO:0005198 structural molecule activity F
TAS
SceS000000175
GO:0000059 protein import into nucleus, docking P
IPI
SceS000000175
GO:0006406 mRNA export from nucleus P
TAS
SceS000000175
GO:0006407 rRNA export from nucleus P
ISS
SpoSPAC890.06
TAS
SceS000000175
GO:0006408 snRNA export from nucleus P
TAS
SceS000000175
GO:0006409 tRNA export from nucleus P
TAS
SceS000000175
GO:0006607 NLS-bearing substrate import into
nucleus		 P
TAS
SceS000000175
GO:0006608 snRNP protein import into nucleus P
TAS
SceS000000175
GO:0006609 mRNA-binding (hnRNP) protein import into
nucleus		 P
TAS
SceS000000175
GO:0006610 ribosomal protein import into nucleus P
TAS
SceS000000175
GO:0006611 protein export from nucleus P
TAS
SceS000000175
GO:0006612 protein targeting to membrane P
IMP
SceS000000175
GO:0006913 nucleocytoplasmic transport P
IC
SpoSPAC890.06
GO:0006999 nuclear pore organization P
TAS
SceS000000175
GO:0007059 chromosome segregation P
IMP
SceS000000175
GO:0045184 establishment of protein localization P
RCA
SceS000000175
GO:0051292 nuclear pore complex assembly P
IGI
SceS000000175

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk