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Search term: YBL087C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL23A
SGD link S000000183
Alternative ID YBL087C
Description Protein component of the large (60S) ribosomal subunit, identical to Rpl23Bp and has similarity to E. coli L14 and rat L23 ribosomal proteins
Synonyms YBL087C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0901 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60S ribosomal protein L14/L17/L23

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g04480 GI:15219736
Arabidopsis thaliana (Ath) At1g17560 GI:15220161
Arabidopsis thaliana (Ath) At2g33370 GI:15226102
Arabidopsis thaliana (Ath) At3g04400 GI:15229287
Arabidopsis thaliana (Ath) At5g46160 GI:15237390
Arabidopsis thaliana (Ath) AtCh058 GI:7525069 P56792
Caenorhabditis elegans (Cel) CE00778
(WBGene00004435)
GI:17554750 P48158
Drosophila melanogaster (Dme) 7291488
(FBgn0010078)
GI:17647883
Homo sapiens (Hsa) Hs17444877 GI:17444877
Homo sapiens (Hsa) Hs17453667 GI:17453667
Homo sapiens (Hsa) Hs17485849 GI:17485849
Homo sapiens (Hsa) Hs20475567_1 GI:20475567
Homo sapiens (Hsa) Hs20539732 GI:20539732
Homo sapiens (Hsa) Hs22048903 GI:22048903
Homo sapiens (Hsa) Hs4506605
(RPL23)
GI:4506605 Q9BTQ7
Saccharomyces cerevisiae (Sce) YBL087c
(S000000183)
GI:6319384 P04451
Saccharomyces cerevisiae (Sce) YER117w
(S000000919)
GI:6320963 P04451
Saccharomyces cerevisiae (Sce) YKL170w
(S000001653)
GI:6322678 P35996
Schizosaccharomyces pombe (Spo) SPAC3G9.03 GI:19114987 O42867
Schizosaccharomyces pombe (Spo) SPBC887.07 GI:19113273 O94292
Schizosaccharomyces pombe (Spo) SPCC1322.11 GI:19075639 O42867
Encephalitozoon cuniculi (Ecu) ECU08g1160i GI:19173443 Q8SRA7
Arabidopsis thaliana (Ath) At1g04480 GI:15219736
Arabidopsis thaliana (Ath) At1g17560 GI:15220161
Arabidopsis thaliana (Ath) At2g33370 GI:15226102
Arabidopsis thaliana (Ath) At3g04400 GI:15229287
Arabidopsis thaliana (Ath) At5g46160 GI:15237390
Arabidopsis thaliana (Ath) AtCh058 GI:7525069 P56792
Caenorhabditis elegans (Cel) CE00778
(WBGene00004435)
GI:17554750 P48158
Drosophila melanogaster (Dme) 7291488
(FBgn0010078)
GI:17647883
Homo sapiens (Hsa) Hs17444877 GI:17444877
Homo sapiens (Hsa) Hs17453667 GI:17453667
Homo sapiens (Hsa) Hs17485849 GI:17485849
Homo sapiens (Hsa) Hs20475567_1 GI:20475567
Homo sapiens (Hsa) Hs20539732 GI:20539732
Homo sapiens (Hsa) Hs22048903 GI:22048903
Homo sapiens (Hsa) Hs4506605
(RPL23)
GI:4506605 Q9BTQ7
Saccharomyces cerevisiae (Sce) YBL087c
(S000000183)
GI:6319384 P04451
Saccharomyces cerevisiae (Sce) YER117w
(S000000919)
GI:6320963 P04451
Saccharomyces cerevisiae (Sce) YKL170w
(S000001653)
GI:6322678 P35996
Schizosaccharomyces pombe (Spo) SPAC3G9.03 GI:19114987 O42867
Schizosaccharomyces pombe (Spo) SPBC887.07 GI:19113273 O94292
Schizosaccharomyces pombe (Spo) SPCC1322.11 GI:19075639 O42867
Encephalitozoon cuniculi (Ecu) ECU08g1160i GI:19173443 Q8SRA7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC3G9.03
SPCC1322.11
GO:0005730 nucleolus C
IDA
AthAt2g33370
GO:0005737 cytoplasm C
IDA
HsaRPL23
GO:0005739 mitochondrion C
IDA
SceS000001653
SpoSPBC887.07
SPCC1322.11
GO:0005762 mitochondrial large ribosomal subunit C
IDA
SceS000001653
IPI
SceS000001653
ISS
SpoSPBC887.07
GO:0005829 cytosol C
EXP
HsaRPL23
GO:0005840 ribosome C
ISS
AthAt1g04480
At2g33370
At3g04400
At5g46160
At1g17560
NAS
DmeFBgn0010078
HsaRPL23
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g04400
At2g33370
ISS
DmeFBgn0010078
SpoSPAC3G9.03
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0003735 structural constituent of ribosome F
IDA
SceS000001653
IPI
SceS000001653
ISS
AthAt2g33370
At3g04400
At1g17560
At1g04480
At5g46160
DmeFBgn0010078
SpoSPAC3G9.03
SPBC887.07
SPCC1322.11
NAS
DmeFBgn0010078
HsaRPL23
TAS
SceS000000919
S000000183
GO:0005515 protein binding F
IPI
DmeFBgn0010078
HsaRPL23
GO:0000003 reproduction P
IMP
CelWBGene00004435
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0010078
GO:0002119 nematode larval development P
IMP
CelWBGene00004435
GO:0006412 translation P
ISS
AthAt2g33370
At5g46160
At3g04400
At1g17560
At1g04480
DmeFBgn0010078
SpoSPAC3G9.03
SPBC887.07
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0006414 translational elongation P
EXP
HsaRPL23
GO:0006610 ribosomal protein import into nucleus P
NAS
HsaRPL23
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010078
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004435
GO:0009793 embryo development ending in seed
dormancy
P
NAS
AthAt3g04400
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004435
GO:0032543 mitochondrial translation P
IC
SceS000001653
NAS
SpoSPBC887.07
GO:0040007 growth P
IMP
CelWBGene00004435

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68103

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL23 GI:4506605 Q9BTQ7
Pan troglodytes (Ptr) RPL23 GI:114667757
Canis familiaris (Cfa) RPL23 GI:50978792
Mus musculus (Mmu) Rpl23
(MGI:1929455)
GI:12584986 P62830
Rattus norvegicus (Rno) Rpl23
(RGD:62067)
GI:56090279
Gallus gallus (Gga) RPL23 GI:118102967
Drosophila melanogaster (Dme) RpL23
(FBgn0010078)
GI:17647883
Anopheles gambiae (Aga) AgaP_AGAP010252 GI:158299333
Caenorhabditis elegans (Cel) rpl-23
(CE00778;
WBGene00004435)
GI:17554750 P48158
Schizosaccharomyces pombe (Spo) rpl23-2
(SPCC1322.11)
GI:19075639 O42867
Schizosaccharomyces pombe (Spo) rpl23-1
(SPAC3G9.03)
GI:19114987 O42867
Saccharomyces cerevisiae (Sce) RPL23A
(S000000183)
GI:6319384 P04451
Saccharomyces cerevisiae (Sce) RPL23B
(S000000919)
GI:6320963 P04451
Kluyveromyces lactis (Kla) KLLA0E06985g GI:50308523
Eremothecium gossypii (Ego) AGOS_AGL288W GI:45200809
Magnaporthe grisea (Mgr) MGG_04921 GI:39940638
Neurospora crassa (Ncr) NCU02905.1 GI:32419235
Arabidopsis thaliana (Ath) AT2G33370 GI:15226102
Arabidopsis thaliana (Ath) AT1G04480 GI:18390397
Arabidopsis thaliana (Ath) emb2171 GI:15229287
Oryza sativa (Osa) Os03g0139100 GI:115450623
Oryza sativa (Osa) Os02g0814700 GI:115449557
Oryza sativa (Osa) Os10g0466700 GI:115482426
Plasmodium falciparum (Pfa) PF13_0171 GI:124513388


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC3G9.03
SPCC1322.11
GO:0005730 nucleolus C
IDA
AthAt2g33370
MmuMGI:1929455
GO:0005737 cytoplasm C
IDA
HsaRPL23
GO:0005739 mitochondrion C
IDA
SpoSPCC1322.11
GO:0005829 cytosol C
EXP
HsaRPL23
GO:0005840 ribosome C
ISS
AthAt1g04480
At2g33370
emb2171
NAS
DmeFBgn0010078
HsaRPL23
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt2g33370
emb2171
ISS
DmeFBgn0010078
SpoSPAC3G9.03
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0022626 cytosolic ribosome C
ISA
MmuMGI:1929455
GO:0003735 structural constituent of ribosome F
ISA
MmuMGI:1929455
ISS
AthAt2g33370
emb2171
At1g04480
DmeFBgn0010078
SpoSPAC3G9.03
SPCC1322.11
NAS
DmeFBgn0010078
HsaRPL23
TAS
SceS000000919
S000000183
GO:0005515 protein binding F
IPI
DmeFBgn0010078
HsaRPL23
GO:0000003 reproduction P
IMP
CelWBGene00004435
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0010078
GO:0002119 nematode larval development P
IMP
CelWBGene00004435
GO:0006412 translation P
ISA
MmuMGI:1929455
ISS
AthAt2g33370
At1g04480
emb2171
DmeFBgn0010078
SpoSPAC3G9.03
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0006414 translational elongation P
EXP
HsaRPL23
GO:0006610 ribosomal protein import into nucleus P
NAS
HsaRPL23
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010078
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004435
GO:0009793 embryo development ending in seed
dormancy
P
NAS
Athemb2171
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004435
GO:0040007 growth P
IMP
CelWBGene00004435

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_207

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga12566 ENSANGP00000014430
Ashbya gossypii (Ago) ago2387 AEL119W
Ashbya gossypii (Ago) ago4024 AGL288W
Arabidopsis thaliana (Ath) ath392 At1g04480.1
Arabidopsis thaliana (Ath) ath10367 At2g33370.1
Arabidopsis thaliana (Ath) ath12478 At3g04400.1
Arabidopsis thaliana (Ath) ath26476 At5g46160.1
Arabidopsis thaliana (Ath) ath26477 At5g46160.2
Caenorhabditis elegans (Cel) cel362 B0336.10
(CE00778;
WBGene00004435)
Candida glabrata (Cgl) cgl1780 CAGL0G03575g
Candida glabrata (Cgl) cgl5018 CAGL0M08338g
Cryptococcus neoformans (Cne) cne3702 176.m02442
Cryptococcus neoformans (Cne) cne5597 179.m00459
Dictyostelium discoideum (Ddi) ddi13439 DDB0201610
Dictyostelium discoideum (Ddi) ddi12896 DDB0230148
Debaryomyces hansenii (Dha) dha1133 DEHA0B10505g
Debaryomyces hansenii (Dha) dha1678 DEHA0C05566g
Drosophila melanogaster (Dme) dme6628 CG3661-PA
(FBgn0010078)
Danio rerio (Dre) dre17592 ENSDARP00000002835
Escherichia coli (Eco) eco3192 16131189
Encephalitozoon cuniculi (Ecu) ecu274 19173443
Takifugu rubripes (Fru) fru23363 SINFRUP00000152919
Gallus gallus (Gga) gga13821 ENSGALP00000002493
(RPL23)
Homo sapiens (Hsa) hsa13554 ENSP00000346039
Kluyveromyces lactis (Kla) kla300 KLLA0A06798g
Kluyveromyces lactis (Kla) kla3263 KLLA0E06985g
Mus musculus (Mmu) mmu4697 ENSMUSP00000018774
Neurospora crassa (Ncr) ncr2810 NCU02905.2
Neurospora crassa (Ncr) ncr8334 NCU08552.2
Oryza sativa (Osa) osa12762 2896.m00113
Oryza sativa (Osa) osa22352 3703.m00135
Oryza sativa (Osa) osa29924 4292.m00248
Oryza sativa (Osa) osa71986 7045.m00168
Oryza sativa (Osa) osa75515 7234.m00131
Oryza sativa (Osa) osa76520 7406.m00119
Oryza sativa (Osa) osa78537 7497.m00136
Oryza sativa (Osa) osa637 873.m00163
Plasmodium falciparum (Pfa) pfa4358 PF13_0171
Plasmodium falciparum (Pfa) pfa3641 PFE0960w
Rattus norvegicus (Rno) rno5997 ENSRNOP00000005471
(RGD:62067)
P62832
Saccharomyces cerevisiae (Sce) sce219 YBL087C
(S000000183)
Saccharomyces cerevisiae (Sce) sce1854 YER117W
(S000000919)
Saccharomyces cerevisiae (Sce) sce3844 YKL170W
(S000001653)
Schizosaccharomyces pombe (Spo) spo1178 SPAC3G9.03 O42867
Schizosaccharomyces pombe (Spo) spo1363 SPBC887.07 O94292
Schizosaccharomyces pombe (Spo) spo3094 SPCC1322.11 O42867
Yarrowia lipolytica (Yli) yli3135 YALI0D10263g
Yarrowia lipolytica (Yli) yli6077 YALI0F17512g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC3G9.03
SPCC1322.11
GO:0005730 nucleolus C
IDA
AthAt2g33370
GO:0005739 mitochondrion C
IDA
SceS000001653
SpoSPBC887.07
SPCC1322.11
GO:0005762 mitochondrial large ribosomal subunit C
IDA
SceS000001653
IPI
SceS000001653
ISS
SpoSPBC887.07
GO:0005840 ribosome C
ISS
AthAt1g04480
At2g33370
At3g04400
At5g46160
NAS
DmeFBgn0010078
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g04400
At2g33370
ISS
DmeFBgn0010078
SpoSPAC3G9.03
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0003735 structural constituent of ribosome F
IDA
SceS000001653
IPI
SceS000001653
ISS
AthAt2g33370
At3g04400
At1g04480
At5g46160
DmeFBgn0010078
SpoSPAC3G9.03
SPBC887.07
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000919
S000000183
GO:0005515 protein binding F
IPI
DmeFBgn0010078
GO:0000003 reproduction P
IMP
CelWBGene00004435
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0010078
GO:0002119 nematode larval development P
IMP
CelWBGene00004435
GO:0006412 translation P
ISS
AthAt2g33370
At5g46160
At3g04400
At1g04480
DmeFBgn0010078
SpoSPAC3G9.03
SPBC887.07
SPCC1322.11
NAS
DmeFBgn0010078
TAS
SceS000000183
S000000919
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0010078
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004435
GO:0009793 embryo development ending in seed
dormancy
P
NAS
AthAt3g04400
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004435
GO:0032543 mitochondrial translation P
IC
SceS000001653
NAS
SpoSPBC887.07
GO:0040007 growth P
IMP
CelWBGene00004435

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1322.11
(O42867)
YBL087C
(S000000183)
SPAC3G9.03
(O42867)
YBL087C
(S000000183)