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Search term: YBL093C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ROX3
SGD link S000000189
Alternative ID YBL093C
Description Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme
Synonyms YBL093C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38346

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) ROX3
(S000000189)
GI:6319377
Kluyveromyces lactis (Kla) KLLA0E06809g GI:50308507
Eremothecium gossypii (Ego) AGOS_AGL280W GI:45200817


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000189
GO:0016592 mediator complex C
IDA
SceS000000189
GO:0016455 RNA polymerase II transcription mediator
activity
F
IDA
SceS000000189
GO:0006366 transcription from RNA polymerase II
promoter
P
IDA
SceS000000189
GO:0009415 response to water P
RCA
SceS000000189

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17595

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago4032 AGL280W
Candida glabrata (Cgl) cgl5070 CAGL0M09515g
Debaryomyces hansenii (Dha) dha4985 DEHA0F13563g
Kluyveromyces lactis (Kla) kla3255 KLLA0E06809g
Saccharomyces cerevisiae (Sce) sce226 YBL093C
(S000000189)
Schizosaccharomyces pombe (Spo) spo4055 SPCC1450.05c Q9Y7N2
Yarrowia lipolytica (Yli) yli4290 YALI0E10351g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPCC1450.05c
IDA
SceS000000189
SpoSPCC1450.05c
GO:0005829 cytosol C
IDA
SpoSPCC1450.05c
GO:0016592 mediator complex C
IDA
SceS000000189
SpoSPCC1450.05c
NAS
SpoSPCC1450.05c
GO:0016455 RNA polymerase II transcription mediator
activity
F
IC
SpoSPCC1450.05c
IDA
SceS000000189
GO:0006366 transcription from RNA polymerase II
promoter
P
IDA
SceS000000189
GO:0009415 response to water P
RCA
SceS000000189
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPCC1450.05c

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1450.05c
(Q9Y7N2)
YBL093C
(S000000189)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SpoSPCC1450.05c
IDA
SceS000000189
SpoSPCC1450.05c
GO:0005829 cytosol C
IDA
SpoSPCC1450.05c
GO:0016592 mediator complex C
IDA
SceS000000189
SpoSPCC1450.05c
NAS
SpoSPCC1450.05c
GO:0016455 RNA polymerase II transcription mediator
activity
F
IC
SpoSPCC1450.05c
IDA
SceS000000189
GO:0006366 transcription from RNA polymerase II
promoter
P
IDA
SceS000000189
GO:0009415 response to water P
RCA
SceS000000189
GO:0032569 gene-specific transcription from RNA polymerase II
promoter
P
IC
SpoSPCC1450.05c

Back to the top
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