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Search term: YBR035C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PDX3
SGD link S000000239
Alternative ID YBR035C
Description Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus; transcription is under the general control of nitrogen metabolism
Synonyms YBR035C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2586 ACDHYP-

KOGs classification KOGs description
METABOLISM Pyridoxamine-phosphate oxidase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g49970_2 GI:8777428
Caenorhabditis elegans (Cel) CE01335
(WBGene00018996)		 GI:17553712 Q20939
Drosophila melanogaster (Dme) 7290918 GI:7290918
Drosophila melanogaster (Dme) 7298947 GI:7298947
Homo sapiens (Hsa) Hs8922498
(PNPO)		 GI:8922498 Q9NVS9
Saccharomyces cerevisiae (Sce) YBR035c
(S000000239)		 GI:6319509 P38075
Schizosaccharomyces pombe (Spo) SPAC1093.02 GI:19115562 Q9UTQ1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000239
SpoSPAC1093.02
GO:0004733 pyridoxamine-phosphate oxidase
activity		 F
IDA
AthAt5g49970
IMP
SceS000000239
ISS
AthAt5g49970
SceS000000239
SpoSPAC1093.02
GO:0006631 fatty acid metabolic process P
IMP
SceS000000239
GO:0008615 pyridoxine biosynthetic process P
ISS
AthAt5g49970
GO:0042817 pyridoxal metabolic process P
IGI
AthAt5g49970
GO:0042818 pyridoxamine metabolic process P
IC
SpoSPAC1093.02

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5364

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PNPO GI:8922498 Q9NVS9
Pan troglodytes (Ptr) PNPO GI:114666390
Canis familiaris (Cfa) PNPO GI:73966182
Mus musculus (Mmu) Pnpo
(MGI:2144151)		 GI:19527238 Q91XF0
Drosophila melanogaster (Dme) CG31472
(FBgn0051472)		 GI:45551845
Anopheles gambiae (Aga) AgaP_AGAP002227 GI:158284895
Caenorhabditis elegans (Cel) F57B9.1
(CE01335;
WBGene00018996)		 GI:17553712 Q20939
Schizosaccharomyces pombe (Spo) SPAC1093.02 GI:19115562 Q9UTQ1
Saccharomyces cerevisiae (Sce) PDX3
(S000000239)		 GI:6319509 P38075
Kluyveromyces lactis (Kla) KLLA0B07062g GI:50303795
Eremothecium gossypii (Ego) AGOS_AAR186W GI:45185011
Magnaporthe grisea (Mgr) MGG_01535 GI:39951785
Neurospora crassa (Ncr) NCU08269.1 GI:32416994


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2144151
SceS000000239
SpoSPAC1093.02
GO:0003674 molecular_function F
ND
MmuMGI:2144151
GO:0004733 pyridoxamine-phosphate oxidase
activity		 F
IMP
SceS000000239
ISS
DmeFBgn0051472
SceS000000239
SpoSPAC1093.02
GO:0006631 fatty acid metabolic process P
IMP
SceS000000239
GO:0008150 biological_process P
ND
MmuMGI:2144151
GO:0008615 pyridoxine biosynthetic process P
ISS
DmeFBgn0051472
GO:0042818 pyridoxamine metabolic process P
IC
SpoSPAC1093.02

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3255

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4367 ENSANGP00000013516
Ashbya gossypii (Ago) ago374 AAR186W
Caenorhabditis elegans (Cel) cel10724 F57B9.1
(CE01335;
WBGene00018996)
Candida glabrata (Cgl) cgl2725 CAGL0I04708g
Dictyostelium discoideum (Ddi) ddi12191 DDB0231657
Debaryomyces hansenii (Dha) dha5213 DEHA0F18491g
Drosophila melanogaster (Dme) dme11416 CG31472-PA
(FBgn0051472)
Drosophila melanogaster (Dme) dme11417 CG31472-PB
(FBgn0051472)
Danio rerio (Dre) dre27457 ENSDARP00000011179
(LOC560182)		 Q6PG36
Danio rerio (Dre) dre3540 ENSDARP00000043532
Escherichia coli (Eco) eco1598 16129596
Takifugu rubripes (Fru) fru5303 SINFRUP00000139389
Homo sapiens (Hsa) hsa13917 ENSP00000225573
(PNPO)		 Q9NVS9
Kluyveromyces lactis (Kla) kla842 KLLA0B07062g
Mus musculus (Mmu) mmu4663 ENSMUSP00000018803
(MGI:2144151)		 Q91XF0
Neurospora crassa (Ncr) ncr8058 NCU08269.2
Saccharomyces cerevisiae (Sce) sce288 YBR035C
(S000000239)
Schizosaccharomyces pombe (Spo) spo363 SPAC1093.02 Q9UTQ1
Yarrowia lipolytica (Yli) yli3300 YALI0D14322g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2144151
SceS000000239
SpoSPAC1093.02
GO:0003674 molecular_function F
ND
MmuMGI:2144151
GO:0004733 pyridoxamine-phosphate oxidase
activity		 F
IMP
SceS000000239
ISS
DmeFBgn0051472
SceS000000239
SpoSPAC1093.02
GO:0006631 fatty acid metabolic process P
IMP
SceS000000239
GO:0008150 biological_process P
ND
MmuMGI:2144151
GO:0008615 pyridoxine biosynthetic process P
ISS
DmeFBgn0051472
GO:0042818 pyridoxamine metabolic process P
IC
SpoSPAC1093.02

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1093.02
(Q9UTQ1)		 YBR035C
(S000000239)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000239
SpoSPAC1093.02
GO:0004733 pyridoxamine-phosphate oxidase
activity		 F
IMP
SceS000000239
ISS
SceS000000239
SpoSPAC1093.02
GO:0006631 fatty acid metabolic process P
IMP
SceS000000239
GO:0042818 pyridoxamine metabolic process P
IC
SpoSPAC1093.02

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