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Search term: YBR044C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TCM62
SGD link S000000248
Alternative ID YBR044C
Description Protein involved in the assembly of the mitochondrial succinate dehydrogenase complex; putative chaperone
Synonyms YBR044C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0356 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Mitochondrial chaperonin, Cpn60/Hsp60p

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g26230 GI:15222666
Arabidopsis thaliana (Ath) At1g55490 GI:15222729
Arabidopsis thaliana (Ath) At2g28000 GI:15226314
Arabidopsis thaliana (Ath) At2g33210 GI:15225813
Arabidopsis thaliana (Ath) At3g13470 GI:15231255
Arabidopsis thaliana (Ath) At3g13860 GI:15231389
Arabidopsis thaliana (Ath) At3g23990 GI:15229559
Arabidopsis thaliana (Ath) At5g18820 GI:15239580
Arabidopsis thaliana (Ath) At5g56500 GI:15241234
Caenorhabditis elegans (Cel) CE27244
(WBGene00002025)
GI:17555558 P50140
Drosophila melanogaster (Dme) 7292599 GI:12644042
Drosophila melanogaster (Dme) 7296174 GI:17864606
Drosophila melanogaster (Dme) 7297006 GI:20129251
Drosophila melanogaster (Dme) 7298068 GI:19921262 Q9VJX7
Homo sapiens (Hsa) Hs12737357 GI:12737357
Homo sapiens (Hsa) Hs17445889 GI:17445889
Homo sapiens (Hsa) Hs17448210 GI:17448210
Homo sapiens (Hsa) Hs17453047 GI:17453047
Homo sapiens (Hsa) Hs17455076 GI:17455076
Homo sapiens (Hsa) Hs18569024 GI:18569024
Homo sapiens (Hsa) Hs18582452_1 GI:18582452
Homo sapiens (Hsa) Hs22041202 GI:22041202
Homo sapiens (Hsa) Hs20540570 GI:20540570
Homo sapiens (Hsa) Hs4504521 GI:4504521
Saccharomyces cerevisiae (Sce) YBR044c
(S000000248)
GI:6319518 P38228
Saccharomyces cerevisiae (Sce) YLR259c
(S000004249)
GI:6323288 P19882
Schizosaccharomyces pombe (Spo) SPAC12G12.04 GI:19113806 Q09864
Arabidopsis thaliana (Ath) At1g26230 GI:15222666
Arabidopsis thaliana (Ath) At1g55490 GI:15222729
Arabidopsis thaliana (Ath) At2g28000 GI:15226314
Arabidopsis thaliana (Ath) At2g33210 GI:15225813
Arabidopsis thaliana (Ath) At3g13470 GI:15231255
Arabidopsis thaliana (Ath) At3g13860 GI:15231389
Arabidopsis thaliana (Ath) At3g23990 GI:15229559
Arabidopsis thaliana (Ath) At5g18820 GI:15239580
Arabidopsis thaliana (Ath) At5g56500 GI:15241234
Caenorhabditis elegans (Cel) CE27244
(WBGene00002025)
GI:17555558 P50140
Drosophila melanogaster (Dme) 7292599 GI:12644042
Drosophila melanogaster (Dme) 7296174 GI:17864606
Drosophila melanogaster (Dme) 7297006 GI:20129251
Drosophila melanogaster (Dme) 7298068 GI:19921262 Q9VJX7
Homo sapiens (Hsa) Hs12737357 GI:12737357
Homo sapiens (Hsa) Hs17445889 GI:17445889
Homo sapiens (Hsa) Hs17448210 GI:17448210
Homo sapiens (Hsa) Hs17453047 GI:17453047
Homo sapiens (Hsa) Hs17455076 GI:17455076
Homo sapiens (Hsa) Hs18569024 GI:18569024
Homo sapiens (Hsa) Hs18582452_1 GI:18582452
Homo sapiens (Hsa) Hs22041202 GI:22041202
Homo sapiens (Hsa) Hs20540570 GI:20540570
Homo sapiens (Hsa) Hs4504521 GI:4504521
Saccharomyces cerevisiae (Sce) YBR044c
(S000000248)
GI:6319518 P38228
Saccharomyces cerevisiae (Sce) YLR259c
(S000004249)
GI:6323288 P19882
Schizosaccharomyces pombe (Spo) SPAC12G12.04 GI:19113806 Q09864
Arabidopsis thaliana (Ath) At1g26230 GI:15222666
Arabidopsis thaliana (Ath) At1g55490 GI:15222729
Arabidopsis thaliana (Ath) At2g28000 GI:15226314
Arabidopsis thaliana (Ath) At2g33210 GI:15225813
Arabidopsis thaliana (Ath) At3g13470 GI:15231255
Arabidopsis thaliana (Ath) At3g13860 GI:15231389
Arabidopsis thaliana (Ath) At3g23990 GI:15229559
Arabidopsis thaliana (Ath) At5g18820 GI:15239580
Arabidopsis thaliana (Ath) At5g56500 GI:15241234
Caenorhabditis elegans (Cel) CE27244
(WBGene00002025)
GI:17555558 P50140
Drosophila melanogaster (Dme) 7292599 GI:12644042
Drosophila melanogaster (Dme) 7296174 GI:17864606
Drosophila melanogaster (Dme) 7297006 GI:20129251
Drosophila melanogaster (Dme) 7298068 GI:19921262 Q9VJX7
Homo sapiens (Hsa) Hs12737357 GI:12737357
Homo sapiens (Hsa) Hs17445889 GI:17445889
Homo sapiens (Hsa) Hs17448210 GI:17448210
Homo sapiens (Hsa) Hs17453047 GI:17453047
Homo sapiens (Hsa) Hs17455076 GI:17455076
Homo sapiens (Hsa) Hs18569024 GI:18569024
Homo sapiens (Hsa) Hs18582452_1 GI:18582452
Homo sapiens (Hsa) Hs22041202 GI:22041202
Homo sapiens (Hsa) Hs20540570 GI:20540570
Homo sapiens (Hsa) Hs4504521 GI:4504521
Saccharomyces cerevisiae (Sce) YBR044c
(S000000248)
GI:6319518 P38228
Saccharomyces cerevisiae (Sce) YLR259c
(S000004249)
GI:6323288 P19882
Schizosaccharomyces pombe (Spo) SPAC12G12.04 GI:19113806 Q09864


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g13470
GO:0005730 nucleolus C
IDA
AthAt3g13470
GO:0005739 mitochondrion C
IDA
AthAt3g13470
At3g13860
At2g28000
At2g33210
At3g23990
At5g56500
CelWBGene00002025
SceS000000248
S000004249
SpoSPAC12G12.04
ISS
AthAt2g33210
SpoSPAC12G12.04
GO:0005743 mitochondrial inner membrane C
IDA
SceS000000248
GO:0005759 mitochondrial matrix C
IDA
AthAt3g23990
GO:0005829 cytosol C
IDA
AthAt3g23990
GO:0005886 plasma membrane C
IDA
AthAt2g33210
At1g55490
At3g13860
At3g23990
GO:0009507 chloroplast C
IDA
AthAt2g33210
At1g55490
At3g13470
At1g26230
At5g56500
At2g28000
ISS
AthAt2g28000
NAS
AthAt1g55490
GO:0009570 chloroplast stroma C
IDA
AthAt1g55490
At3g13470
At2g28000
At5g56500
GO:0009579 thylakoid C
IDA
AthAt2g28000
GO:0009941 chloroplast envelope C
IDA
AthAt1g55490
At3g13470
At2g28000
GO:0010319 stromule C
IDA
AthAt1g55490
GO:0016020 membrane C
IDA
AthAt1g55490
At2g28000
At5g56500
GO:0022626 cytosolic ribosome C
IDA
AthAt1g55490
At3g13470
At2g28000
At3g23990
GO:0031966 mitochondrial membrane C
RCA
SceS000004249
GO:0042645 mitochondrial nucleoid C
IDA
SceS000004249
ISS
SpoSPAC12G12.04
GO:0048046 apoplast C
IDA
AthAt1g55490
At2g28000
GO:0003688 DNA replication origin binding F
IDA
SceS000004249
GO:0003697 single-stranded DNA binding F
IDA
SceS000004249
ISS
SpoSPAC12G12.04
GO:0005507 copper ion binding F
IDA
AthAt2g33210
At3g23990
GO:0005515 protein binding F
IPI
AthAt1g55490
GO:0005524 ATP binding F
IDA
AthAt2g33210
At3g23990
ISS
SpoSPAC12G12.04
GO:0008134 transcription factor binding F
IPI
CelWBGene00002025
GO:0016887 ATPase activity F
IDA
SceS000004249
GO:0051082 unfolded protein binding F
IMP
SceS000000248
S000004249
ISS
CelWBGene00002025
GO:0051087 chaperone binding F
IPI
SceS000004249
GO:0000003 reproduction P
IMP
CelWBGene00002025
GO:0000302 response to reactive oxygen species P
IEP
CelWBGene00002025
GO:0002119 nematode larval development P
IMP
CelWBGene00002025
GO:0006082 organic acid metabolic process P
RCA
SceS000004249
GO:0006457 protein folding P
ISS
SpoSPAC12G12.04
TAS
AthAt1g55490
At2g28000
GO:0006458 'de novo' protein folding P
IMP
SceS000004249
GO:0006954 inflammatory response P
ISS
AthAt2g33210
GO:0007005 mitochondrion organization P
IMP
CelWBGene00002025
TAS
AthAt3g23990
GO:0008219 cell death P
IMP
AthAt1g55490
GO:0009408 response to heat P
IEP
AthAt3g23990
GO:0009409 response to cold P
IEP
AthAt1g55490
GO:0009627 systemic acquired resistance P
IMP
AthAt1g55490
GO:0009658 chloroplast organization P
IMP
AthAt2g28000
GO:0009790 embryo development P
IMP
AthAt2g28000
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00002025
GO:0009793 embryo development ending in seed
dormancy
P
NAS
AthAt5g18820
GO:0030150 protein import into mitochondrial
matrix
P
ISS
SpoSPAC12G12.04
GO:0034514 mitochondrial unfolded protein
response
P
IEP
CelWBGene00002025
GO:0034553 mitochondrial respiratory chain complex II
assembly
P
IMP
SceS000000248
IPI
SceS000000248
GO:0034605 cellular response to heat P
IEP
SpoSPAC12G12.04
GO:0042026 protein refolding P
IDA
SceS000004249
IMP
SceS000004249
GO:0045041 protein import into mitochondrial intermembrane
space
P
IMP
SceS000004249
GO:0046686 response to cadmium ion P
IEP
AthAt3g13860
At3g23990
GO:0050821 protein stabilization P
IMP
SceS000004249
GO:0051085 chaperone mediated protein folding requiring
cofactor
P
IDA
AthAt1g55490
GO:0051131 chaperone-mediated protein complex
assembly
P
IMP
SceS000004249
TAS
AthAt3g23990
GO:0051604 protein maturation P
IMP
SceS000004249
GO:0061077 chaperone-mediated protein folding P
NAS
SpoSPAC12G12.04

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38386

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TCM62
(S000000248)
GI:6319518 P38228
Kluyveromyces lactis (Kla) KLLA0B06732g GI:50303771
Eremothecium gossypii (Ego) AGOS_AER406C GI:45191007


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000000248
GO:0005743 mitochondrial inner membrane C
IDA
SceS000000248
GO:0051082 unfolded protein binding F
IMP
SceS000000248
GO:0034553 mitochondrial respiratory chain complex II
assembly
P
IMP
SceS000000248
IPI
SceS000000248

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31586

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2906 AER406C
Candida glabrata (Cgl) cgl2720 CAGL0I04598g
Kluyveromyces lactis (Kla) kla830 KLLA0B06732g
Saccharomyces cerevisiae (Sce) sce297 YBR044C
(S000000248)