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Search term: YBR048W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS11B
SGD link S000000252
Alternative ID YBR048W
Description Protein component of the small (40S) ribosomal subunit; identical to Rps11Ap and has similarity to E. coli S17 and rat S11 ribosomal proteins
Synonyms YBR048W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1728 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S11

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g48930 GI:15229056
Arabidopsis thaliana (Ath) At4g30800 GI:15234873
Arabidopsis thaliana (Ath) At5g23740 GI:15237819
Caenorhabditis elegans (Cel) CE05860
(WBGene00004480)		 GI:17542016 Q20206
Drosophila melanogaster (Dme) 7303497
(FBgn0033699)		 GI:20129901
Homo sapiens (Hsa) Hs17460599 GI:17460599
Homo sapiens (Hsa) Hs22046070 GI:22046070
Homo sapiens (Hsa) Hs4506681
(RPS11)		 GI:4506681 P62280
Saccharomyces cerevisiae (Sce) YBR048w
(S000000252)		 GI:6319522 P26781
Saccharomyces cerevisiae (Sce) YDR025w
(S000002432)		 GI:6319522 P26781
Schizosaccharomyces pombe (Spo) SPAC144.11 GI:19115584 P79013
Schizosaccharomyces pombe (Spo) SPAC31G5.03 GI:19114915 P79013
Encephalitozoon cuniculi (Ecu) ECU04g0640 GI:19074141 Q8SS53


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt3g48930
GO:0005634 nucleus C
IDA
SpoSPAC31G5.03
GO:0005829 cytosol C
EXP
HsaRPS11
IDA
SpoSPAC31G5.03
GO:0005840 ribosome C
NAS
HsaRPS11
GO:0016020 membrane C
IDA
AthAt3g48930
At5g23740
GO:0022626 cytosolic ribosome C
IDA
AthAt3g48930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g48930
At4g30800
HsaRPS11
SceS000002432
S000000252
ISS
AthAt5g23740
At4g30800
At3g48930
DmeFBgn0033699
SpoSPAC144.11
SPAC31G5.03
GO:0030686 90S preribosome C
IDA
SceS000000252
S000002432
GO:0003735 structural constituent of ribosome F
IDA
SceS000002432
S000000252
ISS
AthAt5g23740
At3g48930
At4g30800
DmeFBgn0033699
SpoSPAC144.11
SPAC31G5.03
GO:0005515 protein binding F
IPI
HsaRPS11
GO:0000003 reproduction P
IMP
CelWBGene00004480
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0033699
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000000252
S000002432
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000002432
S000000252
GO:0002119 nematode larval development P
IMP
CelWBGene00004480
GO:0006412 translation P
IC
HsaRPS11
SceS000000252
S000002432
ISS
AthAt4g30800
At5g23740
At3g48930
DmeFBgn0033699
SpoSPAC31G5.03
SPAC144.11
NAS
HsaRPS11
GO:0006414 translational elongation P
EXP
HsaRPS11
GO:0006417 regulation of translation P
RCA
SceS000000252
S000002432
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0033699
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004480
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004480
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt3g48930
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004480
GO:0019915 lipid storage P
IMP
CelWBGene00004480
GO:0040007 growth P
IMP
CelWBGene00004480
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC31G5.03
SPAC144.11

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
88443

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS11 GI:4506681 P62280
Canis familiaris (Cfa) RPS11 GI:73947970
Mus musculus (Mmu) Rps11
(MGI:1351329)		 GI:21426889 P62281
Rattus norvegicus (Rno) Rps11
(RGD:621026)		 GI:13592071
Gallus gallus (Gga) RPS11 GI:71895103
Drosophila melanogaster (Dme) RpS11
(FBgn0033699)		 GI:20129901
Anopheles gambiae (Aga) AgaP_AGAP009998 GI:158299021
Caenorhabditis elegans (Cel) rps-11
(CE05860;
WBGene00004480)		 GI:17542016 Q20206
Schizosaccharomyces pombe (Spo) rps11-1
(SPAC31G5.03)		 GI:19114915 P79013
Schizosaccharomyces pombe (Spo) rps11 GI:19115584
Saccharomyces cerevisiae (Sce) RPS11A
(S000002432)		 GI:6320228
Saccharomyces cerevisiae (Sce) RPS11B
(S000000252)		 GI:6319522 P26781
Kluyveromyces lactis (Kla) KLLA0A10483g GI:50303043
Eremothecium gossypii (Ego) AGOS_ABL091C GI:45185139
Magnaporthe grisea (Mgr) MGG_03680 GI:39943200
Neurospora crassa (Ncr) NCU03102.1 GI:32420189
Arabidopsis thaliana (Ath) EMB1080 GI:15229056
Arabidopsis thaliana (Ath) AT4G30800 GI:15234873
Arabidopsis thaliana (Ath) RPS11-BETA GI:15237819
Oryza sativa (Osa) Os04g0502300 GI:115459270
Oryza sativa (Osa) Os07g0565000 GI:115472817
Oryza sativa (Osa) Os04g0613600 GI:115460512
Oryza sativa (Osa) Os07g0565100 GI:115472819
Plasmodium falciparum (Pfa) MAL3P6.14 GI:124505009


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthEMB1080
GO:0005634 nucleus C
IDA
SpoSPAC31G5.03
GO:0005829 cytosol C
EXP
HsaRPS11
IDA
SpoSPAC31G5.03
GO:0005840 ribosome C
NAS
HsaRPS11
GO:0016020 membrane C
IDA
AthEMB1080
RPS11-BETA
GO:0022626 cytosolic ribosome C
IDA
AthEMB1080
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt4g30800
EMB1080
HsaRPS11
SceS000002432
S000000252
ISO
MmuMGI:1351329
ISS
AthAt4g30800
RPS11-BETA
EMB1080
DmeFBgn0033699
SpoSPAC31G5.03
GO:0030686 90S preribosome C
IDA
SceS000000252
S000002432
GO:0003735 structural constituent of ribosome F
IDA
SceS000002432
S000000252
ISS
AthEMB1080
At4g30800
RPS11-BETA
DmeFBgn0033699
SpoSPAC31G5.03
GO:0005515 protein binding F
IPI
HsaRPS11
GO:0000003 reproduction P
IMP
CelWBGene00004480
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0033699
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000000252
S000002432
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000002432
S000000252
GO:0002119 nematode larval development P
IMP
CelWBGene00004480
GO:0006412 translation P
IC
HsaRPS11
SceS000000252
S000002432
ISS
AthAt4g30800
RPS11-BETA
EMB1080
DmeFBgn0033699
SpoSPAC31G5.03
NAS
HsaRPS11
GO:0006414 translational elongation P
EXP
HsaRPS11
GO:0006417 regulation of translation P
RCA
SceS000000252
S000002432
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0033699
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004480
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004480
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthEMB1080
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004480
GO:0019915 lipid storage P
IMP
CelWBGene00004480
GO:0040007 growth P
IMP
CelWBGene00004480
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC31G5.03

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1061

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga12294 ENSANGP00000011983
Ashbya gossypii (Ago) ago501 ABL091C
Arabidopsis thaliana (Ath) ath16201 At3g48930.1
Arabidopsis thaliana (Ath) ath21138 At4g30800.1
Arabidopsis thaliana (Ath) ath24624 At5g23740.1
Caenorhabditis elegans (Cel) cel8657 F40F11.1
(CE05860;
WBGene00004480)
Candida glabrata (Cgl) cgl4023 CAGL0K11748g
Cryptococcus neoformans (Cne) cne2362 181.m08397
Dictyostelium discoideum (Ddi) ddi12577 DDB0230027
Debaryomyces hansenii (Dha) dha3861 DEHA0E14058g
Drosophila melanogaster (Dme) dme4624 CG8857-PA
(FBgn0033699)
Drosophila melanogaster (Dme) dme4625 CG8857-PB
(FBgn0033699)
Drosophila melanogaster (Dme) dme4626 CG8857-PC
(FBgn0033699)
Danio rerio (Dre) dre24693 ENSDARP00000024356
Danio rerio (Dre) dre9268 ENSDARP00000026251
Encephalitozoon cuniculi (Ecu) ecu779 19074141
Takifugu rubripes (Fru) fru20916 SINFRUP00000138156
Gallus gallus (Gga) gga3464 ENSGALP00000027901
(RPS11)
Homo sapiens (Hsa) hsa16823 ENSP00000270625
(RPS11)		 P62280
Kluyveromyces lactis (Kla) kla456 KLLA0A10483g
Mus musculus (Mmu) mmu23927 ENSMUSP00000003521
(MGI:1351329)		 P62281
Neurospora crassa (Ncr) ncr3006 NCU03102.2
Oryza sativa (Osa) osa44344 5329.m00151
Oryza sativa (Osa) osa44345 5329.m00152
Oryza sativa (Osa) osa68064 6900.m00124
Oryza sativa (Osa) osa68100 6900.m00172
Plasmodium falciparum (Pfa) pfa2826 PFC0775w
Rattus norvegicus (Rno) rno1818 ENSRNOP00000027961
(RGD:621026)
Rattus norvegicus (Rno) rno23952 ENSRNOP00000036486
Rattus norvegicus (Rno) rno23951 ENSRNOP00000047686
Saccharomyces cerevisiae (Sce) sce301 YBR048W
(S000000252)
Saccharomyces cerevisiae (Sce) sce1055 YDR025W
(S000002432)
Schizosaccharomyces pombe (Spo) spo33 SPAC144.11 P79013
Schizosaccharomyces pombe (Spo) spo1870 SPAC31G5.03 P79013
Yarrowia lipolytica (Yli) yli6203 YALI0F20482g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt3g48930
GO:0005634 nucleus C
IDA
SpoSPAC31G5.03
GO:0005829 cytosol C
IDA
SpoSPAC31G5.03
GO:0016020 membrane C
IDA
AthAt3g48930
At5g23740
GO:0022626 cytosolic ribosome C
IDA
AthAt3g48930
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g48930
At4g30800
SceS000002432
S000000252
ISO
MmuMGI:1351329
ISS
AthAt5g23740
At4g30800
At3g48930
DmeFBgn0033699
PfaPFC0775w
SpoSPAC144.11
SPAC31G5.03
GO:0030686 90S preribosome C
IDA
SceS000000252
S000002432
GO:0003735 structural constituent of ribosome F
IDA
SceS000002432
S000000252
ISS
AthAt5g23740
At3g48930
At4g30800
DmeFBgn0033699
SpoSPAC144.11
SPAC31G5.03
GO:0000003 reproduction P
IMP
CelWBGene00004480
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0033699
GO:0000028 ribosomal small subunit assembly P
IMP
SceS000000252
S000002432
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IGI
SceS000002432
S000000252
GO:0002119 nematode larval development P
IMP
CelWBGene00004480
GO:0006412 translation P
IC
SceS000000252
S000002432
ISS
AthAt4g30800
At5g23740
At3g48930
DmeFBgn0033699
SpoSPAC31G5.03
SPAC144.11
GO:0006417 regulation of translation P
RCA
SceS000000252
S000002432
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0033699
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004480
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00004480
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt3g48930
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00004480
GO:0019915 lipid storage P
IMP
CelWBGene00004480
GO:0040007 growth P
IMP
CelWBGene00004480
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC31G5.03
SPAC144.11

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC144.11
(P79013)		 YBR048W
(S000000252)
SPAC31G5.03
(P79013)		 YBR048W
(S000000252)