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Search term: YBR089C-A

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NHP6B
SGD link S000002157
Alternative ID YBR089C-A
Description High-mobility group non-histone chromatin protein, functionally redundant with Nhp6Ap; homologous to mammalian high mobility group proteins 1 and 2; acts to recruit transcription factor Rcs1p to certain promoters
Synonyms YBR089C-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0381 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED HMG box-containing protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g04880_2 GI:15220344
Arabidopsis thaliana (Ath) At1g20690_2 GI:15218011
Arabidopsis thaliana (Ath) At1g55650_2 GI:15222755
Arabidopsis thaliana (Ath) At1g76110_2 GI:15222957
Arabidopsis thaliana (Ath) At2g17560 GI:15227862
Arabidopsis thaliana (Ath) At2g34450 GI:7485471
Arabidopsis thaliana (Ath) At3g13350_2 GI:18399977
Arabidopsis thaliana (Ath) At3g51880 GI:15231065
Arabidopsis thaliana (Ath) At4g11080 GI:15237042
Arabidopsis thaliana (Ath) At4g23800 GI:15236607
Arabidopsis thaliana (Ath) At4g35570 GI:15237040
Arabidopsis thaliana (Ath) At5g23420 GI:9759080
Caenorhabditis elegans (Cel) CE07701
(WBGene00015075)		 GI:17557300 O16487
Caenorhabditis elegans (Cel) CE10508
(WBGene00001975)		 GI:17541094 Q94234
Caenorhabditis elegans (Cel) CE14458
(WBGene00012209)		 GI:17509489 Q9XVG8
Caenorhabditis elegans (Cel) CE26923
(WBGene00001972)		 GI:17553928 Q09390
Caenorhabditis elegans (Cel) CE28233 GI:17553926
Caenorhabditis elegans (Cel) CE28234 GI:17553924
Caenorhabditis elegans (Cel) CE29377
(WBGene00001971)		 GI:17537205 Q9U2A0
Drosophila melanogaster (Dme) 7291251
(FBgn0026582)		 GI:19922670
Drosophila melanogaster (Dme) 7291329 GI:729741
Drosophila melanogaster (Dme) 7291330 GI:729733
Drosophila melanogaster (Dme) 7292106 GI:7292106
Drosophila melanogaster (Dme) 7293212 GI:17647215
Drosophila melanogaster (Dme) 7300630
(FBgn0038805)		 GI:17738065 Q86BR8
Drosophila melanogaster (Dme) 7300869 GI:7300869 Q9VCZ5
Drosophila melanogaster (Dme) 7300870 GI:7300870 Q9VCZ4
Homo sapiens (Hsa) Hs11321591 GI:11321591 P26583
Homo sapiens (Hsa) Hs14249636 GI:14249636 Q96NM4
Homo sapiens (Hsa) Hs17439570 GI:17439570
Homo sapiens (Hsa) Hs17442539 GI:17442539
Homo sapiens (Hsa) Hs17443311 GI:17443311
Homo sapiens (Hsa) Hs17453405_2 GI:17453405
Homo sapiens (Hsa) Hs17453988 GI:17453988
Homo sapiens (Hsa) Hs17458426 GI:17458426
Homo sapiens (Hsa) Hs17461494 GI:17461494
Homo sapiens (Hsa) Hs17468694 GI:17468694
Homo sapiens (Hsa) Hs17473084 GI:17473084
Homo sapiens (Hsa) Hs17473121 GI:17473121
Homo sapiens (Hsa) Hs17486194 GI:17486194
Homo sapiens (Hsa) Hs17486842 GI:17486842
Homo sapiens (Hsa) Hs17489441 GI:17489441
Homo sapiens (Hsa) Hs18545639 GI:18545639
Homo sapiens (Hsa) Hs18546602 GI:18546602
Homo sapiens (Hsa) Hs18563201 GI:18563201
Homo sapiens (Hsa) Hs18570995 GI:18570995
Homo sapiens (Hsa) Hs18576439 GI:18576439
Homo sapiens (Hsa) Hs18600055 GI:18600055
Homo sapiens (Hsa) Hs19923236_2 GI:19923236 Q9P0W1
Homo sapiens (Hsa) Hs20536023 GI:20536023
Homo sapiens (Hsa) Hs20539802 GI:20469536
Homo sapiens (Hsa) Hs20543624 GI:20543624
Homo sapiens (Hsa) Hs20546564 GI:20546564
Homo sapiens (Hsa) Hs20551847 GI:20551847
Homo sapiens (Hsa) Hs20552486 GI:20552486
Homo sapiens (Hsa) Hs20556362 GI:20556362
Homo sapiens (Hsa) Hs20561190 GI:20561190
Homo sapiens (Hsa) Hs21624652 GI:18088957 Q8WW32
Homo sapiens (Hsa) Hs22045001 GI:22045001
Homo sapiens (Hsa) Hs22045236 GI:22045236
Homo sapiens (Hsa) Hs22053518 GI:22053518
Homo sapiens (Hsa) Hs22055439 GI:22055439
Homo sapiens (Hsa) Hs22055671 GI:22055671
Homo sapiens (Hsa) Hs22055699 GI:22055699
Homo sapiens (Hsa) Hs22061933 GI:22061933
Homo sapiens (Hsa) Hs22062160 GI:22062160
Homo sapiens (Hsa) Hs22064330 GI:22064330
Homo sapiens (Hsa) Hs22065893 GI:22065893
Homo sapiens (Hsa) Hs22067233 GI:22067233
Homo sapiens (Hsa) Hs22067745 GI:22067745
Homo sapiens (Hsa) Hs4504425
(HMGB1)		 GI:4504425 P09429
Homo sapiens (Hsa) Hs4507401_2
(TFAM)		 GI:4507401 Q00059
Homo sapiens (Hsa) Hs4885421 GI:4885421
Homo sapiens (Hsa) Hs5454080 GI:5454080
Homo sapiens (Hsa) Hs7657671
(UBTF)		 GI:7657671 P17480
Homo sapiens (Hsa) Hs7662274
(TOX4)		 GI:7662274 O94842
Homo sapiens (Hsa) Hs7662322
(TOX)		 GI:7662322 O94900
Homo sapiens (Hsa) Hs8922633
(HMG20A)		 GI:8922633 Q9NP66
Saccharomyces cerevisiae (Sce) YBR089c-a
(S000002157)		 GI:6319565 P11633
Saccharomyces cerevisiae (Sce) YDL002c
(S000002160)		 GI:6320202 Q03435
Saccharomyces cerevisiae (Sce) YDR174w
(S000002581)		 GI:6320379 Q03973
Saccharomyces cerevisiae (Sce) YKL032c
(S000001515)		 GI:6322820 P33417
Saccharomyces cerevisiae (Sce) YMR072w
(S000004676)		 GI:6323717 Q02486
Saccharomyces cerevisiae (Sce) YPR052c
(S000006256)		 GI:6325309 P11632
Schizosaccharomyces pombe (Spo) SPAC4G9.11c GI:19114605 Q10241
Schizosaccharomyces pombe (Spo) SPAC57A10.09c GI:19114226 P87057
Schizosaccharomyces pombe (Spo) SPBC28F2.11 GI:19112464 Q9USU7
Encephalitozoon cuniculi (Ecu) ECU06g1270 GI:19074377 Q8SRN7
Arabidopsis thaliana (Ath) At1g04880_2 GI:15220344
Arabidopsis thaliana (Ath) At1g20690_2 GI:15218011
Arabidopsis thaliana (Ath) At1g55650_2 GI:15222755
Arabidopsis thaliana (Ath) At1g76110_2 GI:15222957
Arabidopsis thaliana (Ath) At2g17560 GI:15227862
Arabidopsis thaliana (Ath) At2g34450 GI:7485471
Arabidopsis thaliana (Ath) At3g13350_2 GI:18399977
Arabidopsis thaliana (Ath) At3g51880 GI:15231065
Arabidopsis thaliana (Ath) At4g11080 GI:15237042
Arabidopsis thaliana (Ath) At4g23800 GI:15236607
Arabidopsis thaliana (Ath) At4g35570 GI:15237040
Arabidopsis thaliana (Ath) At5g23420 GI:9759080
Caenorhabditis elegans (Cel) CE07701
(WBGene00015075)		 GI:17557300 O16487
Caenorhabditis elegans (Cel) CE10508
(WBGene00001975)		 GI:17541094 Q94234
Caenorhabditis elegans (Cel) CE14458
(WBGene00012209)		 GI:17509489 Q9XVG8
Caenorhabditis elegans (Cel) CE26923
(WBGene00001972)		 GI:17553928 Q09390
Caenorhabditis elegans (Cel) CE28233 GI:17553926
Caenorhabditis elegans (Cel) CE28234 GI:17553924
Caenorhabditis elegans (Cel) CE29377
(WBGene00001971)		 GI:17537205 Q9U2A0
Drosophila melanogaster (Dme) 7291251
(FBgn0026582)		 GI:19922670
Drosophila melanogaster (Dme) 7291329 GI:729741
Drosophila melanogaster (Dme) 7291330 GI:729733
Drosophila melanogaster (Dme) 7292106 GI:7292106
Drosophila melanogaster (Dme) 7293212 GI:17647215
Drosophila melanogaster (Dme) 7300630
(FBgn0038805)		 GI:17738065 Q86BR8
Drosophila melanogaster (Dme) 7300869 GI:7300869 Q9VCZ5
Drosophila melanogaster (Dme) 7300870 GI:7300870 Q9VCZ4
Homo sapiens (Hsa) Hs11321591 GI:11321591 P26583
Homo sapiens (Hsa) Hs14249636 GI:14249636 Q96NM4
Homo sapiens (Hsa) Hs17439570 GI:17439570
Homo sapiens (Hsa) Hs17442539 GI:17442539
Homo sapiens (Hsa) Hs17443311 GI:17443311
Homo sapiens (Hsa) Hs17453405_2 GI:17453405
Homo sapiens (Hsa) Hs17453988 GI:17453988
Homo sapiens (Hsa) Hs17458426 GI:17458426
Homo sapiens (Hsa) Hs17461494 GI:17461494
Homo sapiens (Hsa) Hs17468694 GI:17468694
Homo sapiens (Hsa) Hs17473084 GI:17473084
Homo sapiens (Hsa) Hs17473121 GI:17473121
Homo sapiens (Hsa) Hs17486194 GI:17486194
Homo sapiens (Hsa) Hs17486842 GI:17486842
Homo sapiens (Hsa) Hs17489441 GI:17489441
Homo sapiens (Hsa) Hs18545639 GI:18545639
Homo sapiens (Hsa) Hs18546602 GI:18546602
Homo sapiens (Hsa) Hs18563201 GI:18563201
Homo sapiens (Hsa) Hs18570995 GI:18570995
Homo sapiens (Hsa) Hs18576439 GI:18576439
Homo sapiens (Hsa) Hs18600055 GI:18600055
Homo sapiens (Hsa) Hs19923236_2 GI:19923236 Q9P0W1
Homo sapiens (Hsa) Hs20536023 GI:20536023
Homo sapiens (Hsa) Hs20539802 GI:20469536
Homo sapiens (Hsa) Hs20543624 GI:20543624
Homo sapiens (Hsa) Hs20546564 GI:20546564
Homo sapiens (Hsa) Hs20551847 GI:20551847
Homo sapiens (Hsa) Hs20552486 GI:20552486
Homo sapiens (Hsa) Hs20556362 GI:20556362
Homo sapiens (Hsa) Hs20561190 GI:20561190
Homo sapiens (Hsa) Hs21624652 GI:18088957 Q8WW32
Homo sapiens (Hsa) Hs22045001 GI:22045001
Homo sapiens (Hsa) Hs22045236 GI:22045236
Homo sapiens (Hsa) Hs22053518 GI:22053518
Homo sapiens (Hsa) Hs22055439 GI:22055439
Homo sapiens (Hsa) Hs22055671 GI:22055671
Homo sapiens (Hsa) Hs22055699 GI:22055699
Homo sapiens (Hsa) Hs22061933 GI:22061933
Homo sapiens (Hsa) Hs22062160 GI:22062160
Homo sapiens (Hsa) Hs22064330 GI:22064330
Homo sapiens (Hsa) Hs22065893 GI:22065893
Homo sapiens (Hsa) Hs22067233 GI:22067233
Homo sapiens (Hsa) Hs22067745 GI:22067745
Homo sapiens (Hsa) Hs4504425
(HMGB1)		 GI:4504425 P09429
Homo sapiens (Hsa) Hs4507401_2
(TFAM)		 GI:4507401 Q00059
Homo sapiens (Hsa) Hs4885421 GI:4885421
Homo sapiens (Hsa) Hs5454080 GI:5454080
Homo sapiens (Hsa) Hs7657671
(UBTF)		 GI:7657671 P17480
Homo sapiens (Hsa) Hs7662274
(TOX4)		 GI:7662274 O94842
Homo sapiens (Hsa) Hs7662322
(TOX)		 GI:7662322 O94900
Homo sapiens (Hsa) Hs8922633
(HMG20A)		 GI:8922633 Q9NP66
Saccharomyces cerevisiae (Sce) YBR089c-a
(S000002157)		 GI:6319565 P11633
Saccharomyces cerevisiae (Sce) YDL002c
(S000002160)		 GI:6320202 Q03435
Saccharomyces cerevisiae (Sce) YDR174w
(S000002581)		 GI:6320379 Q03973
Saccharomyces cerevisiae (Sce) YKL032c
(S000001515)		 GI:6322820 P33417
Saccharomyces cerevisiae (Sce) YMR072w
(S000004676)		 GI:6323717 Q02486
Saccharomyces cerevisiae (Sce) YPR052c
(S000006256)		 GI:6325309 P11632
Schizosaccharomyces pombe (Spo) SPAC4G9.11c GI:19114605 Q10241
Schizosaccharomyces pombe (Spo) SPAC57A10.09c GI:19114226 P87057
Schizosaccharomyces pombe (Spo) SPBC28F2.11 GI:19112464 Q9USU7
Encephalitozoon cuniculi (Ecu) ECU06g1270 GI:19074377 Q8SRN7
Arabidopsis thaliana (Ath) At1g04880_2 GI:15220344
Arabidopsis thaliana (Ath) At1g20690_2 GI:15218011
Arabidopsis thaliana (Ath) At1g55650_2 GI:15222755
Arabidopsis thaliana (Ath) At1g76110_2 GI:15222957
Arabidopsis thaliana (Ath) At2g17560 GI:15227862
Arabidopsis thaliana (Ath) At2g34450 GI:7485471
Arabidopsis thaliana (Ath) At3g13350_2 GI:18399977
Arabidopsis thaliana (Ath) At3g51880 GI:15231065
Arabidopsis thaliana (Ath) At4g11080 GI:15237042
Arabidopsis thaliana (Ath) At4g23800 GI:15236607
Arabidopsis thaliana (Ath) At4g35570 GI:15237040
Arabidopsis thaliana (Ath) At5g23420 GI:9759080
Caenorhabditis elegans (Cel) CE07701
(WBGene00015075)		 GI:17557300 O16487
Caenorhabditis elegans (Cel) CE10508
(WBGene00001975)		 GI:17541094 Q94234
Caenorhabditis elegans (Cel) CE14458
(WBGene00012209)		 GI:17509489 Q9XVG8
Caenorhabditis elegans (Cel) CE26923
(WBGene00001972)		 GI:17553928 Q09390
Caenorhabditis elegans (Cel) CE28233 GI:17553926
Caenorhabditis elegans (Cel) CE28234 GI:17553924
Caenorhabditis elegans (Cel) CE29377
(WBGene00001971)		 GI:17537205 Q9U2A0
Drosophila melanogaster (Dme) 7291251
(FBgn0026582)		 GI:19922670
Drosophila melanogaster (Dme) 7291329 GI:729741
Drosophila melanogaster (Dme) 7291330 GI:729733
Drosophila melanogaster (Dme) 7292106 GI:7292106
Drosophila melanogaster (Dme) 7293212 GI:17647215
Drosophila melanogaster (Dme) 7300630
(FBgn0038805)		 GI:17738065 Q86BR8
Drosophila melanogaster (Dme) 7300869 GI:7300869 Q9VCZ5
Drosophila melanogaster (Dme) 7300870 GI:7300870 Q9VCZ4
Homo sapiens (Hsa) Hs11321591 GI:11321591 P26583
Homo sapiens (Hsa) Hs14249636 GI:14249636 Q96NM4
Homo sapiens (Hsa) Hs17439570 GI:17439570
Homo sapiens (Hsa) Hs17442539 GI:17442539
Homo sapiens (Hsa) Hs17443311 GI:17443311
Homo sapiens (Hsa) Hs17453405_2 GI:17453405
Homo sapiens (Hsa) Hs17453988 GI:17453988
Homo sapiens (Hsa) Hs17458426 GI:17458426
Homo sapiens (Hsa) Hs17461494 GI:17461494
Homo sapiens (Hsa) Hs17468694 GI:17468694
Homo sapiens (Hsa) Hs17473084 GI:17473084
Homo sapiens (Hsa) Hs17473121 GI:17473121
Homo sapiens (Hsa) Hs17486194 GI:17486194
Homo sapiens (Hsa) Hs17486842 GI:17486842
Homo sapiens (Hsa) Hs17489441 GI:17489441
Homo sapiens (Hsa) Hs18545639 GI:18545639
Homo sapiens (Hsa) Hs18546602 GI:18546602
Homo sapiens (Hsa) Hs18563201 GI:18563201
Homo sapiens (Hsa) Hs18570995 GI:18570995
Homo sapiens (Hsa) Hs18576439 GI:18576439
Homo sapiens (Hsa) Hs18600055 GI:18600055
Homo sapiens (Hsa) Hs19923236_2 GI:19923236 Q9P0W1
Homo sapiens (Hsa) Hs20536023 GI:20536023
Homo sapiens (Hsa) Hs20539802 GI:20469536
Homo sapiens (Hsa) Hs20543624 GI:20543624
Homo sapiens (Hsa) Hs20546564 GI:20546564
Homo sapiens (Hsa) Hs20551847 GI:20551847
Homo sapiens (Hsa) Hs20552486 GI:20552486
Homo sapiens (Hsa) Hs20556362 GI:20556362
Homo sapiens (Hsa) Hs20561190 GI:20561190
Homo sapiens (Hsa) Hs21624652 GI:18088957 Q8WW32
Homo sapiens (Hsa) Hs22045001 GI:22045001
Homo sapiens (Hsa) Hs22045236 GI:22045236
Homo sapiens (Hsa) Hs22053518 GI:22053518
Homo sapiens (Hsa) Hs22055439 GI:22055439
Homo sapiens (Hsa) Hs22055671 GI:22055671
Homo sapiens (Hsa) Hs22055699 GI:22055699
Homo sapiens (Hsa) Hs22061933 GI:22061933
Homo sapiens (Hsa) Hs22062160 GI:22062160
Homo sapiens (Hsa) Hs22064330 GI:22064330
Homo sapiens (Hsa) Hs22065893 GI:22065893
Homo sapiens (Hsa) Hs22067233 GI:22067233
Homo sapiens (Hsa) Hs22067745 GI:22067745
Homo sapiens (Hsa) Hs4504425
(HMGB1)		 GI:4504425 P09429
Homo sapiens (Hsa) Hs4507401_2
(TFAM)		 GI:4507401 Q00059
Homo sapiens (Hsa) Hs4885421 GI:4885421
Homo sapiens (Hsa) Hs5454080 GI:5454080
Homo sapiens (Hsa) Hs7657671
(UBTF)		 GI:7657671 P17480
Homo sapiens (Hsa) Hs7662274
(TOX4)		 GI:7662274 O94842
Homo sapiens (Hsa) Hs7662322
(TOX)		 GI:7662322 O94900
Homo sapiens (Hsa) Hs8922633
(HMG20A)		 GI:8922633 Q9NP66
Saccharomyces cerevisiae (Sce) YBR089c-a
(S000002157)		 GI:6319565 P11633
Saccharomyces cerevisiae (Sce) YDL002c
(S000002160)		 GI:6320202 Q03435
Saccharomyces cerevisiae (Sce) YDR174w
(S000002581)		 GI:6320379 Q03973
Saccharomyces cerevisiae (Sce) YKL032c
(S000001515)		 GI:6322820 P33417
Saccharomyces cerevisiae (Sce) YMR072w
(S000004676)		 GI:6323717 Q02486
Saccharomyces cerevisiae (Sce) YPR052c
(S000006256)		 GI:6325309 P11632
Schizosaccharomyces pombe (Spo) SPAC4G9.11c GI:19114605 Q10241
Schizosaccharomyces pombe (Spo) SPAC57A10.09c GI:19114226 P87057
Schizosaccharomyces pombe (Spo) SPBC28F2.11 GI:19112464 Q9USU7
Encephalitozoon cuniculi (Ecu) ECU06g1270 GI:19074377 Q8SRN7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000262 mitochondrial chromosome C
IDA
SceS000004676
GO:0000781 chromosome, telomeric region C
IDA
CelWBGene00001975
GO:0000785 chromatin C
TAS
AthAt2g17560
At4g35570
At3g51880
GO:0000790 nuclear chromatin C
IDA
SceS000001515
S000002581
ISS
SpoSPAC57A10.09c
GO:0000793 condensed chromosome C
IDA
HsaHMGB1
GO:0005575 cellular_component C
ND
AthAt1g20690
GO:0005615 extracellular space C
IDA
HsaHMGB1
GO:0005634 nucleus C
IDA
AthAt5g23420
CelWBGene00001975
WBGene00001972
HsaHMGB1
HMG20A
TOX4
UBTF
SceS000002160
S000002157
S000006256
SpoSPAC57A10.09c
NAS
HsaHMG20A
SpoSPAC4G9.11c
GO:0005654 nucleoplasm C
EXP
HsaHMGB1
UBTF
GO:0005730 nucleolus C
IDA
HsaHMGB1
UBTF
SceS000002581
ISS
HsaUBTF
GO:0005737 cytoplasm C
IDA
SceS000002581
SpoSPBC28F2.11
GO:0005739 mitochondrion C
IDA
DmeFBgn0038805
SceS000004676
SpoSPAC4G9.11c
ISS
DmeFBgn0038805
NAS
DmeFBgn0038805
GO:0005759 mitochondrial matrix C
EXP
HsaTFAM
GO:0005794 Golgi apparatus C
IDA
HsaTOX4
SpoSPBC28F2.11
GO:0005829 cytosol C
IDA
SpoSPAC57A10.09c
GO:0009507 chloroplast C
IDA
AthAt1g55650
GO:0009986 cell surface C
IDA
HsaHMGB1
GO:0017053 transcriptional repressor complex C
IDA
HsaHMGB1
GO:0031011 Ino80 complex C
IDA
SceS000002160
GO:0032301 MutSalpha complex C
IDA
SceS000006256
GO:0042645 mitochondrial nucleoid C
IDA
HsaTFAM
SceS000004676
GO:0000182 rDNA binding F
RCA
SceS000002160
GO:0000400 four-way junction DNA binding F
IDA
SceS000002581
GO:0000404 loop DNA binding F
IDA
SceS000002160
GO:0003674 molecular_function F
ND
AthAt1g20690
GO:0003677 DNA binding F
IDA
AthAt4g35570
At5g23420
At3g51880
At2g17560
SceS000004676
ISS
AthAt3g51880
At2g17560
At4g35570
CelWBGene00001972
DmeFBgn0026582
SpoSPAC57A10.09c
SPBC28F2.11
NAS
HsaHMG20A
GO:0003682 chromatin binding F
TAS
AthAt4g35570
At2g17560
At3g51880
GO:0003684 damaged DNA binding F
IDA
SceS000001515
SpoSPAC4G9.11c
ISS
HsaHMGB1
GO:0003690 double-stranded DNA binding F
IDA
SceS000002581
ISS
HsaHMGB1
GO:0003697 single-stranded DNA binding F
ISS
HsaHMGB1
GO:0003700 transcription factor activity F
IDA
HsaHMGB1
ISS
AthAt1g04880
At5g23420
At4g11080
At4g35570
At1g76110
At1g55650
At4g23800
At2g17560
At2g34450
At3g13350
At3g51880
DmeFBgn0038805
NAS
DmeFBgn0038805
HsaHMG20A
GO:0003701 RNA polymerase I transcription factor
activity		 F
TAS
HsaUBTF
GO:0005125 cytokine activity F
ISS
HsaHMGB1
GO:0005515 protein binding F
IPI
HsaTFAM
HMGB1
HMG20A
UBTF
GO:0008134 transcription factor binding F
IPI
HsaHMGB1
GO:0008301 DNA bending activity F
IDA
SceS000002157
S000006256
S000002581
S000004676
IMP
HsaHMGB1
ISS
HsaHMGB1
RCA
SceS000006256
GO:0030527 structural constituent of chromatin F
TAS
AthAt4g35570
At2g17560
At3g51880
GO:0030528 transcription regulator activity F
NAS
SpoSPAC57A10.09c
GO:0031491 nucleosome binding F
IDA
SceS000006256
ISS
SceS000002157
GO:0042056 chemoattractant activity F
ISS
HsaHMGB1
GO:0043565 sequence-specific DNA binding F
IDA
SceS000002157
S000006256
S000001515
RCA
SceS000002160
GO:0045027 DNA end binding F
IDA
SceS000002160
GO:0050786 RAGE receptor binding F
ISS
HsaHMGB1
GO:0070491 transcription repressor binding F
IPI
HsaHMGB1
GO:0000001 mitochondrion inheritance P
IMP
SceS000004676
GO:0000002 mitochondrial genome maintenance P
IMP
SceS000004676
GO:0000003 reproduction P
IMP
CelWBGene00015075
WBGene00001975
WBGene00012209
WBGene00001972
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
IMP
HsaHMGB1
GO:0001708 cell fate specification P
IMP
CelWBGene00001972
GO:0001773 myeloid dendritic cell activation P
ISS
HsaHMGB1
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00001972
GO:0002119 nematode larval development P
IMP
CelWBGene00015075
WBGene00001972
GO:0002407 dendritic cell chemotaxis P
ISS
HsaHMGB1
GO:0002437 inflammatory response to antigenic
stimulus		 P
IEP
HsaHMGB1
GO:0006261 DNA-dependent DNA replication P
TAS
HsaTFAM
GO:0006264 mitochondrial DNA replication P
NAS
DmeFBgn0038805
GO:0006265 DNA topological change P
ISS
HsaHMGB1
GO:0006281 DNA repair P
IGI
SceS000001515
TAS
SpoSPAC4G9.11c
GO:0006288 base-excision repair, DNA ligation P
IDA
HsaHMGB1
GO:0006298 mismatch repair P
IC
SceS000006256
GO:0006302 double-strand break repair P
IGI
SceS000002160
IMP
SceS000002160
GO:0006310 DNA recombination P
ISS
HsaHMGB1
GO:0006325 chromatin organization P
NAS
HsaHMG20A
GO:0006333 chromatin assembly or disassembly P
TAS
AthAt2g17560
At4g35570
At3g51880
GO:0006334 nucleosome assembly P
ISS
SpoSPAC57A10.09c
GO:0006338 chromatin remodeling P
IGI
SceS000002157
S000006256
ISS
SpoSPAC57A10.09c
GO:0006355 regulation of transcription, DNA-dependent P
NAS
HsaHMG20A
SpoSPBC28F2.11
GO:0006356 regulation of transcription from RNA polymerase I
promoter		 P
IGI
SceS000002581
IMP
SceS000002581
TAS
HsaTFAM
UBTF
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IDA
HsaHMGB1
ISS
SpoSPAC57A10.09c
RCA
SceS000002160
GO:0006359 regulation of transcription from RNA polymerase
III promoter		 P
ISS
SpoSPAC57A10.09c
GO:0006366 transcription from RNA polymerase II
promoter		 P
IGI
SceS000002157
GO:0006414 translational elongation P
RCA
SceS000002581
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015075
WBGene00001972
GO:0006916 anti-apoptosis P
IGI
SpoSPBC28F2.11
GO:0008150 biological_process P
ND
AthAt1g20690
GO:0008406 gonad development P
IMP
CelWBGene00001972
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001972
GO:0010171 body morphogenesis P
IMP
CelWBGene00001972
GO:0010553 negative regulation of gene-specific transcription
from RNA polymerase II promoter		 P
IMP
SceS000001515
GO:0016055 Wnt receptor signaling pathway P
IGI
CelWBGene00001972
GO:0017055 negative regulation of RNA polymerase II
transcriptional preinitiation complex
assembly		 P
IDA
HsaHMGB1
GO:0031175 neuron projection development P
ISS
HsaHMGB1
GO:0033151 V(D)J recombination P
IDA
HsaHMGB1
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A10.09c
GO:0034401 regulation of transcription by chromatin
organization		 P
IDA
SceS000002581
GO:0034724 DNA replication-independent nucleosome
organization		 P
IDA
SceS000006256
GO:0040007 growth P
IMP
CelWBGene00015075
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015075
WBGene00001972
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00001972
GO:0040025 vulval development P
IMP
CelWBGene00001972
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00015075
WBGene00001972
GO:0042766 nucleosome mobilization P
IDA
SceS000002160
GO:0043065 positive regulation of apoptosis P
IDA
HsaHMGB1
GO:0043280 positive regulation of caspase
activity		 P
IDA
HsaHMGB1
GO:0043388 positive regulation of DNA binding P
IDA
HsaHMGB1
GO:0045132 meiotic chromosome segregation P
IMP
CelWBGene00012209
GO:0045449 regulation of transcription P
NAS
DmeFBgn0038805
TAS
AthAt1g76110
At1g04880
GO:0045893 positive regulation of transcription,
DNA-dependent		 P
ISS
DmeFBgn0038805
GO:0045943 positive regulation of transcription from RNA
polymerase I promoter		 P
ISS
HsaUBTF
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IDA
HsaHMGB1
ISS
SpoSPAC57A10.09c
GO:0051103 DNA ligation involved in DNA repair P
ISS
HsaHMGB1
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IDA
SceS000006256
GO:0060962 regulation of ribosomal protein gene transcription
from RNA polymerase II promoter		 P
IGI
SceS000002581
IMP
SceS000002581
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000002157
S000006256
IGI
SceS000002157
S000006256
GO:0071456 cellular response to hypoxia P
IGI
SceS000001515
IMP
SceS000001515

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38408

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC57A10.09c GI:19114226 P87057
Saccharomyces cerevisiae (Sce) NHP6B
(S000002157)		 GI:6319565 P11633
Saccharomyces cerevisiae (Sce) NHP6A
(S000006256)		 GI:6325309 P11632
Kluyveromyces lactis (Kla) KLLA0B12056g GI:50304233
Eremothecium gossypii (Ego) AGOS_ADL310W GI:45187563
Magnaporthe grisea (Mgr) MGG_04489 GI:39945014
Neurospora crassa (Ncr) NCU09995.1 GI:32404480


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
ISS
SpoSPAC57A10.09c
GO:0005634 nucleus C
IDA
SceS000002157
S000006256
SpoSPAC57A10.09c
GO:0005829 cytosol C
IDA
SpoSPAC57A10.09c
GO:0032301 MutSalpha complex C
IDA
SceS000006256
GO:0003677 DNA binding F
ISS
SpoSPAC57A10.09c
GO:0008301 DNA bending activity F
IDA
SceS000002157
S000006256
RCA
SceS000006256
GO:0030528 transcription regulator activity F
NAS
SpoSPAC57A10.09c
GO:0031491 nucleosome binding F
IDA
SceS000006256
ISS
SceS000002157
GO:0043565 sequence-specific DNA binding F
IDA
SceS000002157
S000006256
GO:0006298 mismatch repair P
IC
SceS000006256
GO:0006334 nucleosome assembly P
ISS
SpoSPAC57A10.09c
GO:0006338 chromatin remodeling P
IGI
SceS000002157
S000006256
ISS
SpoSPAC57A10.09c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISS
SpoSPAC57A10.09c
GO:0006359 regulation of transcription from RNA polymerase
III promoter		 P
ISS
SpoSPAC57A10.09c
GO:0006366 transcription from RNA polymerase II
promoter		 P
IGI
SceS000002157
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A10.09c
GO:0034724 DNA replication-independent nucleosome
organization		 P
IDA
SceS000006256
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
ISS
SpoSPAC57A10.09c
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IDA
SceS000006256
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000002157
S000006256
IGI
SceS000002157
S000006256

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_155

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14549 ENSANGP00000019772
Anopheles gambiae (Aga) aga14548 ENSANGP00000023800
Ashbya gossypii (Ago) ago1431 ADL310W
Ashbya gossypii (Ago) ago2501 AEL005C
Arabidopsis thaliana (Ath) ath2217 At1g20693.1
Arabidopsis thaliana (Ath) ath2218 At1g20696.1
Arabidopsis thaliana (Ath) ath16510 At3g51880.1
Arabidopsis thaliana (Ath) ath16511 At3g51880.2
Caenorhabditis elegans (Cel) cel9506 F47D12.4a
(CE26923;
WBGene00001972)
Caenorhabditis elegans (Cel) cel9507 F47D12.4b
(CE28233)
Caenorhabditis elegans (Cel) cel9508 F47D12.4c
(CE28234)
Candida glabrata (Cgl) cgl5115 CAGL0M10505g
Cryptococcus neoformans (Cne) cne1502 180.m00457
Dictyostelium discoideum (Ddi) ddi11986 DDB0216420
Debaryomyces hansenii (Dha) dha3159 DEHA0D19239g
Debaryomyces hansenii (Dha) dha5261 DEHA0F19602g
Drosophila melanogaster (Dme) dme18153 CG12223-PA
(FBgn0011764)
Drosophila melanogaster (Dme) dme18154 CG12223-PB
(FBgn0011764)
Drosophila melanogaster (Dme) dme18155 CG12223-PC
(FBgn0011764)
Drosophila melanogaster (Dme) dme18156 CG12223-PD
(FBgn0011764)
Drosophila melanogaster (Dme) dme18157 CG12223-PE
(FBgn0011764)
Drosophila melanogaster (Dme) dme6410 CG17921-PA
(FBgn0010228)
Drosophila melanogaster (Dme) dme6409 CG17921-PB
(FBgn0010228)
Drosophila melanogaster (Dme) dme6412 CG17950-PA
(FBgn0004362)
Drosophila melanogaster (Dme) dme6413 CG17950-PB
(FBgn0004362)
Danio rerio (Dre) dre15915 ENSDARP00000036113
Danio rerio (Dre) dre821 ENSDARP00000047158
(LOC566317)
Danio rerio (Dre) dre6591 ENSDARP00000047690
Danio rerio (Dre) dre30574 ENSDARP00000048925
Takifugu rubripes (Fru) fru26935 SINFRUP00000127213
Takifugu rubripes (Fru) fru8909 SINFRUP00000133801
Takifugu rubripes (Fru) fru5345 SINFRUP00000152052
Takifugu rubripes (Fru) fru15522 SINFRUP00000156635
Gallus gallus (Gga) gga17170 ENSGALP00000014747
(HMGB3)		 P36194
Gallus gallus (Gga) gga17568 ENSGALP00000017462
(HMGB2)		 P26584
Gallus gallus (Gga) gga3104 ENSGALP00000027541
(HMGB1)		 Q9YH06
Homo sapiens (Hsa) hsa33539 ENSP00000031803
Homo sapiens (Hsa) hsa24857 ENSP00000296503
(HMGB2)		 P26583
Homo sapiens (Hsa) hsa810 ENSP00000315236
Homo sapiens (Hsa) hsa8629 ENSP00000343040
(HMGB1)		 P09429
Homo sapiens (Hsa) hsa8628 ENSP00000345347
(HMGB1)		 P09429
Kluyveromyces lactis (Kla) kla1064 KLLA0B12056g
Kluyveromyces lactis (Kla) kla3733 KLLA0E17457g
Mus musculus (Mmu) mmu29082 ENSMUSP00000015361
(MGI:1098219)		 O54879
Mus musculus (Mmu) mmu18930 ENSMUSP00000059625
(MGI:1916567)		 Q6P8W9
Mus musculus (Mmu) mmu25981 ENSMUSP00000065940
(MGI:96157)		 P30681
Mus musculus (Mmu) mmu31367 ENSMUSP00000071330
Mus musculus (Mmu) mmu21358 ENSMUSP00000073917
Mus musculus (Mmu) mmu13572 ENSMUSP00000074298
Mus musculus (Mmu) mmu11 ENSMUSP00000077177
Neurospora crassa (Ncr) ncr7369 NCU07568.2
Neurospora crassa (Ncr) ncr9737 NCU09995.2
Oryza sativa (Osa) osa4004 1981.m00037
Oryza sativa (Osa) osa4031 1981.m00053
Oryza sativa (Osa) osa4032 1981.m00054
Oryza sativa (Osa) osa4038 1981.m00055
Oryza sativa (Osa) osa20744 3633.m00227
Oryza sativa (Osa) osa20773 3633.m00276
Plasmodium falciparum (Pfa) pfa2066 MAL8P1.72
Plasmodium falciparum (Pfa) pfa5341 PFL0145c
Rattus norvegicus (Rno) rno32434 ENSRNOP00000015044
(RGD:1564407)		 B0BN99
Rattus norvegicus (Rno) rno12379 ENSRNOP00000017635
(RGD:69291)		 P52925
Rattus norvegicus (Rno) rno15595 ENSRNOP00000036955
Rattus norvegicus (Rno) rno7022 ENSRNOP00000040005
Rattus norvegicus (Rno) rno3923 ENSRNOP00000040874
(GI:680054)
Rattus norvegicus (Rno) rno1993 ENSRNOP00000041728
Rattus norvegicus (Rno) rno23965 ENSRNOP00000041856
(RGD:1596426)
Saccharomyces cerevisiae (Sce) sce347 YBR089C-A
(S000002157)
Saccharomyces cerevisiae (Sce) sce769 YDL002C
(S000002160)
Saccharomyces cerevisiae (Sce) sce6507 YPR052C
(S000006256)
Schizosaccharomyces pombe (Spo) spo1241 SPAC57A10.09c P87057
Yarrowia lipolytica (Yli) yli2203 YALI0C11671g
Yarrowia lipolytica (Yli) yli3453 YALI0D17996g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000785 chromatin C
ISS
PfaPFL0145c
TAS
AthAt1g20696
At1g20693
At3g51880
GO:0000790 nuclear chromatin C
IDA
DmeFBgn0004362
ISS
SpoSPAC57A10.09c
GO:0005625 soluble fraction C
ISO
MmuMGI:96157
GO:0005634 nucleus C
IC
DmeFBgn0011764
MmuMGI:96157
IDA
CelWBGene00001972
DmeFBgn0011764
MmuMGI:1098219
SceS000002160
S000002157
S000006256
SpoSPAC57A10.09c
ISO
MmuMGI:96157
ISS
PfaPFL0145c
NAS
DmeFBgn0010228
GO:0005829 cytosol C
IDA
SpoSPAC57A10.09c
GO:0031011 Ino80 complex C
IDA
SceS000002160
GO:0032301 MutSalpha complex C
IDA
SceS000006256
GO:0000182 rDNA binding F
RCA
SceS000002160
GO:0000404 loop DNA binding F
IDA
SceS000002160
GO:0003677 DNA binding F
IDA
AthAt1g20693
At1g20696
At3g51880
DmeFBgn0011764
ISS
AthAt1g20696
At3g51880
At1g20693
CelWBGene00001972
SpoSPAC57A10.09c
NAS
DmeFBgn0010228
GO:0003680 AT DNA binding F
IDA
DmeFBgn0004362
GO:0003682 chromatin binding F
ISS
PfaPFL0145c
TAS
AthAt1g20693
At1g20696
At3g51880
GO:0003700 transcription factor activity F
ISS
AthAt1g20696
At1g20693
At3g51880
GO:0008134 transcription factor binding F
IPI
DmeFBgn0011764
GO:0008289 lipid binding F
ISO
MmuMGI:96157
GO:0008301 DNA bending activity F
IDA
DmeFBgn0011764
FBgn0004362
SceS000002157
S000006256
NAS
DmeFBgn0004362
RCA
SceS000006256
GO:0016564 transcription repressor activity F
IDA
DmeFBgn0011764
IMP
DmeFBgn0011764
GO:0019904 protein domain specific binding F
IPI
MmuMGI:96157
GO:0030527 structural constituent of chromatin F
TAS
AthAt1g20693
At1g20696
At3g51880
GO:0030528 transcription regulator activity F
NAS
SpoSPAC57A10.09c
GO:0031491 nucleosome binding F
IDA
SceS000006256
ISS
SceS000002157
GO:0031493 nucleosomal histone binding F
ISO
MmuMGI:96157
GO:0043565 sequence-specific DNA binding F
IDA
SceS000002157
S000006256
RCA
SceS000002160
GO:0045027 DNA end binding F
IDA
SceS000002160
GO:0000003 reproduction P
IMP
CelWBGene00001972
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
IDA
DmeFBgn0011764
IMP
DmeFBgn0011764
GO:0001708 cell fate specification P
IMP
CelWBGene00001972
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00001972
GO:0002119 nematode larval development P
IMP
CelWBGene00001972
GO:0006298 mismatch repair P
IC
SceS000006256
GO:0006302 double-strand break repair P
IGI
SceS000002160
IMP
SceS000002160
GO:0006325 chromatin organization P
IDA
DmeFBgn0004362
GO:0006333 chromatin assembly or disassembly P
TAS
AthAt1g20693
At1g20696
At3g51880
GO:0006334 nucleosome assembly P
ISS
SpoSPAC57A10.09c
GO:0006338 chromatin remodeling P
IGI
SceS000002157
S000006256
IMP
DmeFBgn0011764
ISS
SpoSPAC57A10.09c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
IDA
MmuMGI:96157
ISS
SpoSPAC57A10.09c
RCA
SceS000002160
GO:0006359 regulation of transcription from RNA polymerase
III promoter		 P
ISS
PfaMAL8P1.72
SpoSPAC57A10.09c
GO:0006366 transcription from RNA polymerase II
promoter		 P
IGI
SceS000002157
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00001972
GO:0007283 spermatogenesis P
IMP
MmuMGI:96157
GO:0007289 spermatid nucleus differentiation P
IMP
MmuMGI:96157
GO:0007379 segment specification P
IMP
DmeFBgn0011764
GO:0007399 nervous system development P
ISO
MmuMGI:96157
GO:0007517 muscle organ development P
IMP
DmeFBgn0004362
GO:0008348 negative regulation of antimicrobial humoral
response		 P
IGI
DmeFBgn0011764
IMP
DmeFBgn0011764
GO:0008406 gonad development P
IMP
CelWBGene00001972
GO:0008584 male gonad development P
IMP
MmuMGI:96157
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00001972
GO:0010171 body morphogenesis P
IMP
CelWBGene00001972
GO:0010552 positive regulation of gene-specific transcription
from RNA polymerase II promoter		 P
IMP
MmuMGI:96157
GO:0016055 Wnt receptor signaling pathway P
IGI
CelWBGene00001972
GO:0032502 developmental process P
IMP
DmeFBgn0011764
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A10.09c
GO:0034724 DNA replication-independent nucleosome
organization		 P
IDA
SceS000006256
GO:0035218 leg disc development P
IMP
DmeFBgn0011764
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00001972
GO:0040018 positive regulation of multicellular organism
growth		 P
IMP
CelWBGene00001972
GO:0040025 vulval development P
IMP
CelWBGene00001972
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00001972
GO:0042766 nucleosome mobilization P
IDA
SceS000002160
GO:0043388 positive regulation of DNA binding P
IDA
DmeFBgn0011764
MmuMGI:96157
GO:0045578 negative regulation of B cell differentiation P
IDA
MmuMGI:1098219
GO:0045638 negative regulation of myeloid cell
differentiation		 P
IDA
MmuMGI:1098219
GO:0045941 positive regulation of transcription P
ISO
MmuMGI:96157
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
ISS
SpoSPAC57A10.09c
GO:0048545 response to steroid hormone stimulus P
IMP
MmuMGI:96157
GO:0048813 dendrite morphogenesis P
IMP
DmeFBgn0004362
GO:0051054 positive regulation of DNA metabolic
process		 P
ISO
MmuMGI:96157
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IDA
SceS000006256
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000002157
S000006256
IGI
SceS000002157
S000006256

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC57A10.09c
(P87057)		 YBR089C-A
(S000002157)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
ISS
SpoSPAC57A10.09c
GO:0005634 nucleus C
IDA
SceS000002157
SpoSPAC57A10.09c
GO:0005829 cytosol C
IDA
SpoSPAC57A10.09c
GO:0003677 DNA binding F
ISS
SpoSPAC57A10.09c
GO:0008301 DNA bending activity F
IDA
SceS000002157
GO:0030528 transcription regulator activity F
NAS
SpoSPAC57A10.09c
GO:0031491 nucleosome binding F
ISS
SceS000002157
GO:0043565 sequence-specific DNA binding F
IDA
SceS000002157
GO:0006334 nucleosome assembly P
ISS
SpoSPAC57A10.09c
GO:0006338 chromatin remodeling P
IGI
SceS000002157
ISS
SpoSPAC57A10.09c
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISS
SpoSPAC57A10.09c
GO:0006359 regulation of transcription from RNA polymerase
III promoter		 P
ISS
SpoSPAC57A10.09c
GO:0006366 transcription from RNA polymerase II
promoter		 P
IGI
SceS000002157
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A10.09c
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
ISS
SpoSPAC57A10.09c
GO:0070898 RNA polymerase III transcriptional preinitiation
complex assembly		 P
IDA
SceS000002157
IGI
SceS000002157

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