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Search term: YBR123C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TFC1
SGD link S000000327
Alternative ID YBR123C
Description One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA globular domain of TFIIIC that binds DNA at the BoxA promoter sites of tRNA and similar genes; human homolog is TFIIIC-63
Synonyms YBR123C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2473 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNA polymerase III transcription factor (TF)IIIC subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g49410 GI:15229134
Arabidopsis thaliana (Ath) At5g24450 GI:15238539
Caenorhabditis elegans (Cel) CE01063
(WBGene00011368)		 GI:17554870 Q22093
Drosophila melanogaster (Dme) 7298548
(l(2)37Cd)		 GI:20129619 Q9VIZ2
Homo sapiens (Hsa) Hs6912402 GI:6912402
Homo sapiens (Hsa) Hs17449893 GI:17449893
Saccharomyces cerevisiae (Sce) YBR123c
(S000000327)		 GI:6319600 P32367
Schizosaccharomyces pombe (Spo) SPAC6F12.11c GI:19114209 O14229
Encephalitozoon cuniculi (Ecu) ECU08g1770 GI:19173502 Q8SUJ7


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000327
SpoSPAC6F12.11c
GO:0005575 cellular_component C
ND
AthAt3g49410
At5g24450
GO:0005737 cytoplasm C
IDA
SpoSPAC6F12.11c
GO:0005829 cytosol C
IDA
SpoSPAC6F12.11c
GO:0003674 molecular_function F
ND
AthAt5g24450
At3g49410
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPAC6F12.11c
TAS
SceS000000327
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPAC6F12.11c
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPAC6F12.11c
TAS
SceS000000327
GO:0006911 phagocytosis, engulfment P
IMP
Dmel(2)37Cd
GO:0008150 biological_process P
ND
AthAt5g24450
At3g49410
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00011368

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38424

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) sfc1
(SPAC6F12.11c)		 GI:19114209 O14229
Saccharomyces cerevisiae (Sce) TFC1
(S000000327)		 GI:6319600 P32367
Kluyveromyces lactis (Kla) KLLA0B08866g GI:50303947
Eremothecium gossypii (Ego) AGOS_ADL376W GI:45187497


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000327
SpoSPAC6F12.11c
GO:0005737 cytoplasm C
IDA
SpoSPAC6F12.11c
GO:0005829 cytosol C
IDA
SpoSPAC6F12.11c
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPAC6F12.11c
TAS
SceS000000327
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPAC6F12.11c
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPAC6F12.11c
TAS
SceS000000327

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15301

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago1365 ADL376W
Candida glabrata (Cgl) cgl3424 CAGL0J09878g
Debaryomyces hansenii (Dha) dha819 DEHA0B03091g
Takifugu rubripes (Fru) fru25407 SINFRUP00000176679
Kluyveromyces lactis (Kla) kla921 KLLA0B08866g
Neurospora crassa (Ncr) ncr3677 NCU03787.2
Saccharomyces cerevisiae (Sce) sce385 YBR123C
(S000000327)
Yarrowia lipolytica (Yli) yli4466 YALI0E14663g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000327
GO:0003709 RNA polymerase III transcription factor
activity		 F
TAS
SceS000000327
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
TAS
SceS000000327

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC6F12.11c
(O14229)		 YBR123C
(S000000327)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000127 transcription factor TFIIIC complex C
IDA
SceS000000327
SpoSPAC6F12.11c
GO:0005737 cytoplasm C
IDA
SpoSPAC6F12.11c
GO:0005829 cytosol C
IDA
SpoSPAC6F12.11c
GO:0003709 RNA polymerase III transcription factor
activity		 F
IDA
SpoSPAC6F12.11c
TAS
SceS000000327
GO:0043035 chromatin insulator sequence binding F
IDA
SpoSPAC6F12.11c
GO:0006384 transcription initiation from RNA polymerase III
promoter		 P
IDA
SpoSPAC6F12.11c
TAS
SceS000000327

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