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Search term: YBR198C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TAF5
SGD link S000000402
Alternative ID YBR198C
Description Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification
Synonyms YBR198C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0263 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
GO:0005634 nucleus C
IDA
SpoSPCC5E4.03c
NAS
DmeFBgn0010356
GO:0005669 transcription factor TFIID complex C
IDA
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
ISS
DmeFBgn0010356
TAS
SpoSPBC15D4.14
GO:0005829 cytosol C
IDA
SpoSPBC15D4.14
SPCC5E4.03c
GO:0030914 STAGA complex C
IDA
HsaTAF5L
GO:0033276 transcription factor TFTC complex C
IDA
HsaTAF5L
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000000402
GO:0000166 nucleotide binding F
ISS
AthAt5g25150
GO:0003682 chromatin binding F
IDA
SceS000000402
GO:0003700 transcription factor activity F
TAS
HsaTAF5L
GO:0003704 specific RNA polymerase II transcription factor
activity
F
RCA
SceS000000402
GO:0003713 transcription coactivator activity F
IDA
HsaTAF5L
GO:0004402 histone acetyltransferase activity F
IDA
HsaTAF5L
GO:0005515 protein binding F
IPI
SpoSPCC5E4.03c
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000000402
ISS
DmeFBgn0010356
GO:0016986 transcription initiation factor
activity
F
IC
SpoSPBC15D4.14
SPCC5E4.03c
GO:0006338 chromatin remodeling P
IC
SpoSPCC5E4.03c
GO:0006355 regulation of transcription, DNA-dependent P
NAS
DmeFBgn0010356
GO:0006366 transcription from RNA polymerase II
promoter
P
TAS
HsaTAF5L
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
IC
SpoSPCC5E4.03c
ISS
DmeFBgn0010356
TAS
SpoSPBC15D4.14
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000000402
GO:0016568 chromatin modification P
IDA
SceS000000402
GO:0016573 histone acetylation P
IC
SpoSPCC5E4.03c
IDA
SceS000000402
GO:0030071 regulation of mitotic metaphase/anaphase
transition
P
IGI
SpoSPBC15D4.14
GO:0032568 general transcription from RNA polymerase II
promoter
P
IDA
SceS000000402
GO:0043966 histone H3 acetylation P
IDA
HsaTAF5L
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
IDA
DmeFBgn0010356
GO:0048518 positive regulation of biological
process
P
RCA
SceS000000402
GO:0048522 positive regulation of cellular
process
P
RCA
SceS000000402
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly
P
IC
SceS000000402

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5064

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TAF5 GI:21071067
Pan troglodytes (Ptr) TAF5 GI:114632660
Mus musculus (Mmu) Taf5
(MGI:2442144)
GI:110665722 Q8C092
Rattus norvegicus (Rno) Taf5 GI:62642438
Gallus gallus (Gga) RCJMB04_15p4 GI:71895077
Drosophila melanogaster (Dme) Taf5
(FBgn0010356)
GI:17136870
Anopheles gambiae (Aga) AgaP_AGAP011678 GI:158301063
Caenorhabditis elegans (Cel) taf-5
(CE39361;
WBGene00006386)
GI:115533709
Schizosaccharomyces pombe (Spo) taf72
(SPCC5E4.03c)
GI:19075402 O13282
Saccharomyces cerevisiae (Sce) TAF5
(S000000402)
GI:6319675 P38129
Kluyveromyces lactis (Kla) KLLA0E23529g GI:50309993
Eremothecium gossypii (Ego) AGOS_AEL246C GI:45190361
Magnaporthe grisea (Mgr) MGG_06742 GI:145606002
Neurospora crassa (Ncr) NCU04136.1 GI:32405726
Arabidopsis thaliana (Ath) TAF5 GI:79520288
Oryza sativa (Osa) Os06g0649500 GI:115469236


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
GO:0005634 nucleus C
IDA
CelWBGene00006386
HsaTAF5
MmuMGI:2442144
SpoSPCC5E4.03c
NAS
DmeFBgn0010356
GO:0005654 nucleoplasm C
EXP
HsaTAF5
GO:0005669 transcription factor TFIID complex C
IDA
HsaTAF5
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
ISO
MmuMGI:2442144
ISS
DmeFBgn0010356
GO:0005737 cytoplasm C
IDA
HsaTAF5
GO:0005829 cytosol C
IDA
SpoSPCC5E4.03c
GO:0015629 actin cytoskeleton C
IDA
HsaTAF5
GO:0033276 transcription factor TFTC complex C
IDA
HsaTAF5
GO:0043231 intracellular membrane-bounded
organelle
C
IDA
HsaTAF5
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000000402
GO:0003677 DNA binding F
IDA
MmuMGI:2442144
GO:0003682 chromatin binding F
IDA
SceS000000402
GO:0003700 transcription factor activity F
IDA
HsaTAF5
IMP
HsaTAF5
GO:0003704 specific RNA polymerase II transcription factor
activity
F
RCA
SceS000000402
GO:0004402 histone acetyltransferase activity F
IDA
HsaTAF5
GO:0005515 protein binding F
IPI
HsaTAF5
SpoSPCC5E4.03c
GO:0010843 promoter binding F
IDA
HsaTAF5
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000000402
ISS
DmeFBgn0010356
GO:0016986 transcription initiation factor
activity
F
IC
SpoSPCC5E4.03c
IDA
HsaTAF5
GO:0046983 protein dimerization activity F
IDA
HsaTAF5
GO:0000003 reproduction P
IMP
CelWBGene00006386
GO:0000910 cytokinesis P
IMP
CelWBGene00006386
GO:0001703 gastrulation with mouth forming
first
P
IMP
CelWBGene00006386
GO:0002119 nematode larval development P
IMP
CelWBGene00006386
GO:0006338 chromatin remodeling P
IC
SpoSPCC5E4.03c
GO:0006355 regulation of transcription, DNA-dependent P
NAS
DmeFBgn0010356
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
EXP
HsaTAF5
IC
SpoSPCC5E4.03c
IDA
HsaTAF5
ISS
DmeFBgn0010356
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
EXP
HsaTAF5
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00006386
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000000402
GO:0007369 gastrulation P
IMP
CelWBGene00006386
GO:0008150 biological_process P
ND
MmuMGI:2442144
GO:0009790 embryo development P
IMP
CelWBGene00006386
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00006386
GO:0016568 chromatin modification P
IC
HsaTAF5
IDA
SceS000000402
GO:0016573 histone acetylation P
IC
SpoSPCC5E4.03c
IDA
SceS000000402
GO:0032568 general transcription from RNA polymerase II
promoter
P
IDA
SceS000000402
GO:0032940 secretion by cell P
IMP
CelWBGene00006386
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P
IDA
DmeFBgn0010356
GO:0048518 positive regulation of biological
process
P
RCA
SceS000000402
GO:0048522 positive regulation of cellular
process
P
RCA
SceS000000402
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly
P
IC
SceS000000402
GO:0051301 cell division P
IMP
CelWBGene00006386

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1606

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga8806 ENSANGP00000017965
Anopheles gambiae (Aga) aga8807 ENSANGP00000026542
Ashbya gossypii (Ago) ago2260 AEL246C
Arabidopsis thaliana (Ath) ath24783 At5g25150.1
Caenorhabditis elegans (Cel) cel7730 F30F8.8
(CE39361;
WBGene00006386)
Candida glabrata (Cgl) cgl4888 CAGL0M05335g
Dictyostelium discoideum (Ddi) ddi13087 DDB0231003
Debaryomyces hansenii (Dha) dha5062 DEHA0F15235g
Drosophila melanogaster (Dme) dme4397 CG7704-PA
(FBgn0010356)
Danio rerio (Dre) dre1085 ENSDARP00000015825
(taf5)
Q32PW4
Danio rerio (Dre) dre1084 ENSDARP00000018255
Encephalitozoon cuniculi (Ecu) ecu1063 19074975
Takifugu rubripes (Fru) fru28155 SINFRUP00000134888
Takifugu rubripes (Fru) fru28156 SINFRUP00000171647
Gallus gallus (Gga) gga20793 ENSGALP00000013395
Gallus gallus (Gga) gga20795 ENSGALP00000013396
Gallus gallus (Gga) gga20796 ENSGALP00000013397
Gallus gallus (Gga) gga20792 ENSGALP00000013398
(RCJMB04_15p4)
Q5F3I7
Gallus gallus (Gga) gga20797 ENSGALP00000013399
Gallus gallus (Gga) gga20794 ENSGALP00000013400
Homo sapiens (Hsa) hsa4548 ENSP00000278063
Homo sapiens (Hsa) hsa4549 ENSP00000311024
(TAF5)
Q15542-2
Kluyveromyces lactis (Kla) kla4009 KLLA0E23529g
Mus musculus (Mmu) mmu13869 ENSMUSP00000026027
(MGI:2442144)
Q8C092
Neurospora crassa (Ncr) ncr4012 NCU04136.2
Oryza sativa (Osa) osa3879 2070.m00098
Oryza sativa (Osa) osa76614 7301.m00168
Rattus norvegicus (Rno) rno4228 ENSRNOP00000027482
(RGD:1311332)
Saccharomyces cerevisiae (Sce) sce469 YBR198C
(S000000402)
Schizosaccharomyces pombe (Spo) spo4937 SPBC15D4.14 O74319
Schizosaccharomyces pombe (Spo) spo527 SPCC5E4.03c O13282
Yarrowia lipolytica (Yli) yli1328 YALI0B14245g