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Search term: YBR198C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TAF5
SGD link S000000402
Alternative ID YBR198C
Description Subunit (90 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification
Synonyms YBR198C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0263 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4
Arabidopsis thaliana (Ath) At5g25150 GI:15238722
Caenorhabditis elegans (Cel) CE09819 GI:17509347
Drosophila melanogaster (Dme) 7294830 GI:17864464
Drosophila melanogaster (Dme) 7303687
(FBgn0010356)
GI:17136870
Homo sapiens (Hsa) Hs20558786 GI:20558786
Homo sapiens (Hsa) Hs21071065 GI:21071065
Homo sapiens (Hsa) Hs21071067 GI:16156439
Homo sapiens (Hsa) Hs7657439
(TAF5L)
GI:7657439 O75529
Saccharomyces cerevisiae (Sce) YBR198c
(S000000402)
GI:6319675 P38129
Schizosaccharomyces pombe (Spo) SPBC15D4.14 GI:19113046 O74319
Schizosaccharomyces pombe (Spo) SPCC5E4.03c GI:19075402 O13282
Encephalitozoon cuniculi (Ecu) ECU08g1180 GI:19173445 Q8SUN9
Encephalitozoon cuniculi (Ecu) ECU11g1750 GI:19074975 Q8SQS4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
GO:0005634 nucleus C
IDA
SpoSPCC5E4.03c
NAS
DmeFBgn0010356
GO:0005669 transcription factor TFIID complex C
IDA
SceS000000402
SpoSPCC5E4.03c
IPI
DmeFBgn0010356
ISS
DmeFBgn0010356
TAS
SpoSPBC15D4.14
GO:0005829 cytosol C
IDA
SpoSPBC15D4.14
SPCC5E4.03c
GO:0030914 STAGA complex C
IDA
HsaTAF5L
GO:0033276 transcription factor TFTC complex C
IDA
HsaTAF5L
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000000402
GO:0000166 nucleotide binding F
ISS
AthAt5g25150
GO:0003682 chromatin binding F
IDA
SceS000000402
GO:0003700 transcription factor activity F
TAS
HsaTAF5L
GO:0003704 specific RNA polymerase II transcription factor
activity
F
RCA
SceS000000402
GO:0003713 transcription coactivator activity F
IDA
HsaTAF5L
GO:0004402 histone acetyltransferase activity F
IDA
HsaTAF5L
GO:0005515 protein binding F
IPI
SpoSPCC5E4.03c
GO:0016251 general RNA polymerase II transcription factor
activity
F
IDA
SceS000000402
ISS
DmeFBgn0010356
GO:0016986 transcription initiation factor
activity
F
IC
SpoSPBC15D4.14
SPCC5E4.03c
GO:0006338 chromatin remodeling P
IC
SpoSPCC5E4.03c
GO:0006355 regulation of transcription, DNA-dependent P
NAS
DmeFBgn0010356
GO:0006366 transcription from RNA polymerase II
promoter
P
TAS
HsaTAF5L
GO:0006367 transcription initiation from RNA polymerase II
promoter
P
IC
SpoSPCC5E4.03c
ISS
DmeFBgn0010356
TAS
SpoSPBC15D4.14
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000000402
GO:0016568 chromatin modification P
IDA
SceS000000402
GO:0016573 histone acetylation P
IC
SpoSPCC5E4.03c
IDA
SceS000000402
GO:0030071 regulation of mitotic metaphase/anaphase
transition
P
IGI
SpoSPBC15D4.14
GO:0032568 general transcription from RNA polymerase II
promoter
P
IDA
SceS000000402
GO:0043966 histone H3 acetylation P
IDA
HsaTAF5L
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter
P