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Search term: YBR234C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARC40
SGD link S000000438
Alternative ID YBR234C
Description Subunit of the ARP2/3 complex, which is required for the motility and integrity of cortical actin patches
Synonyms YBR234C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1523 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g30910 GI:15224586
Arabidopsis thaliana (Ath) At2g31300 GI:15224651
Caenorhabditis elegans (Cel) CE24672
(WBGene00000201)
GI:17556568 Q9U1R7
Drosophila melanogaster (Dme) 7298100 GI:17136250
Homo sapiens (Hsa) Hs5031601
(ARPC1B)
GI:5031601 O15143
Homo sapiens (Hsa) Hs5454078 GI:5454078
Homo sapiens (Hsa) Hs17437866 GI:17437866
Homo sapiens (Hsa) Hs20484677 GI:20484677
Saccharomyces cerevisiae (Sce) YBR234c
(S000000438)
GI:6319711 P38328
Schizosaccharomyces pombe (Spo) SPBC14C8.06 GI:19112701 P78774


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g31300
At2g30910
GO:0005737 cytoplasm C
IDA
AthAt2g31300
At2g30910
GO:0005829 cytosol C
IDA
SpoSPBC14C8.06
GO:0005885 Arp2/3 protein complex C
IDA
SceS000000438
SpoSPBC14C8.06
TAS
AthAt2g31300
At2g30910
HsaARPC1B
GO:0005937 mating projection C
RCA
SceS000000438
GO:0005938 cell cortex C
RCA
SceS000000438
GO:0015629 actin cytoskeleton C
TAS
HsaARPC1B
GO:0030427 site of polarized growth C
RCA
SceS000000438
GO:0030479 actin cortical patch C
IDA
SpoSPBC14C8.06
RCA
SceS000000438
GO:0030863 cortical cytoskeleton C
RCA
SceS000000438
GO:0030864 cortical actin cytoskeleton C
RCA
SceS000000438
GO:0032153 cell division site C
IDA
SpoSPBC14C8.06
GO:0042995 cell projection C
RCA
SceS000000438
GO:0043332 mating projection tip C
RCA
SceS000000438
GO:0044448 cell cortex part C
RCA
SceS000000438
GO:0044463 cell projection part C
RCA
SceS000000438
GO:0051286 cell tip C
IDA
SpoSPBC14C8.06
GO:0000166 nucleotide binding F
ISS
AthAt2g31300
At2g30910
GO:0003674 molecular_function F
ND
SceS000000438
GO:0005200 structural constituent of cytoskeleton F
TAS
HsaARPC1B
GO:0005515 protein binding F
IPI
HsaARPC1B
SpoSPBC14C8.06
GO:0000001 mitochondrion inheritance P
TAS
SceS000000438
GO:0000003 reproduction P
IMP
CelWBGene00000201
GO:0000147 actin cortical patch assembly P
IC
SpoSPBC14C8.06
GO:0002119 nematode larval development P
IMP
CelWBGene00000201
GO:0006897 endocytosis P
IC
SpoSPBC14C8.06
GO:0006928 cellular component movement P
TAS
HsaARPC1B
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000000438
GO:0007015 actin filament organization P
IMP
SceS000000438
TAS
AthAt2g31300
At2g30910
GO:0007047 cellular cell wall organization P
RCA
SceS000000438
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00000201
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPBC14C8.06
GO:0034314 Arp2/3 complex-mediated actin nucleation P
IDA
SpoSPBC14C8.06
GO:0040007 growth P
IMP
CelWBGene00000201
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000201
GO:0040011 locomotion P
IMP
CelWBGene00000201
GO:0040018 positive regulation of multicellular organism
growth
P
IMP
CelWBGene00000201
GO:0045010 actin nucleation P
IDA
SceS000000438
GO:0048308 organelle inheritance P
RCA
SceS000000438
GO:0051049 regulation of transport P
RCA
SceS000000438

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4675

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ARPC1A GI:22907052
Canis familiaris (Cfa) ARPC1A GI:73958091
Mus musculus (Mmu) Arpc1a
(MGI:1928896)
GI:9790221 Q9R0Q6
Rattus norvegicus (Rno) Arpc1a
(RGD:620834)
GI:13592137
Gallus gallus (Gga) ARPC1A GI:118097826
Drosophila melanogaster (Dme) Sop2
(FBgn0001961)
GI:24584206
Anopheles gambiae (Aga) AgaP_AGAP008908 GI:58392833
Caenorhabditis elegans (Cel) arx-3
(CE24672;
WBGene00000201)
GI:17556568 Q9U1R7
Schizosaccharomyces pombe (Spo) arc1
(SPBC14C8.06)
GI:19112701 P78774
Saccharomyces cerevisiae (Sce) ARC40
(S000000438)
GI:6319711 P38328
Kluyveromyces lactis (Kla) KLLA0F10615g GI:50311079
Eremothecium gossypii (Ego) AGOS_AFL022W GI:45198497
Magnaporthe grisea (Mgr) MGG_04352 GI:145614718
Neurospora crassa (Ncr) NCU02781.1 GI:32418982


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPBC14C8.06
GO:0005885 Arp2/3 protein complex C
IDA
SceS000000438
SpoSPBC14C8.06
NAS
DmeFBgn0001961
TAS
DmeFBgn0001961
MmuMGI:1928896
GO:0005937 mating projection C
RCA
SceS000000438
GO:0005938 cell cortex C
RCA
SceS000000438
GO:0015629 actin cytoskeleton C
TAS
HsaARPC1A
GO:0030427 site of polarized growth C
RCA
SceS000000438
GO:0030479 actin cortical patch C
IDA
SpoSPBC14C8.06
RCA
SceS000000438
GO:0030863 cortical cytoskeleton C
RCA
SceS000000438
GO:0030864 cortical actin cytoskeleton C
RCA
SceS000000438
GO:0032153 cell division site C
IDA
SpoSPBC14C8.06
GO:0042995 cell projection C
RCA
SceS000000438
GO:0043332 mating projection tip C
RCA
SceS000000438
GO:0044448 cell cortex part C
RCA
SceS000000438
GO:0044463 cell projection part C
RCA
SceS000000438
GO:0051286 cell tip C
IDA
SpoSPBC14C8.06
GO:0003674 molecular_function F
ND
MmuMGI:1928896
SceS000000438
GO:0003779 actin binding F
ISS
DmeFBgn0001961
GO:0005515 protein binding F
IPI
HsaARPC1A
SpoSPBC14C8.06
GO:0000001 mitochondrion inheritance P
TAS
SceS000000438
GO:0000003 reproduction P
IMP
CelWBGene00000201
GO:0000147 actin cortical patch assembly P
IC
SpoSPBC14C8.06
GO:0001745 compound eye morphogenesis P
IMP
DmeFBgn0001961
GO:0002119 nematode larval development P
IMP
CelWBGene00000201
GO:0006897 endocytosis P
IC
SpoSPBC14C8.06
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000000438
GO:0007010 cytoskeleton organization P
ISS
DmeFBgn0001961
GO:0007015 actin filament organization P
IMP
SceS000000438
GO:0007047 cellular cell wall organization P
RCA
SceS000000438
GO:0007303 cytoplasmic transport, nurse cell to
oocyte
P
IMP
DmeFBgn0001961
GO:0007409 axonogenesis P
IGI
DmeFBgn0001961
GO:0007413 axonal fasciculation P
IGI
DmeFBgn0001961
GO:0008150 biological_process P
ND
MmuMGI:1928896
GO:0008335 female germline ring canal stabilization P
IMP
DmeFBgn0001961
GO:0008407 bristle morphogenesis P
IMP
DmeFBgn0001961
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00000201
GO:0030029 actin filament-based process P
IMP
DmeFBgn0001961
GO:0030036 actin cytoskeleton organization P
TAS
HsaARPC1A
GO:0030037 actin filament reorganization involved in cell
cycle
P
IMP
DmeFBgn0001961
GO:0030041 actin filament polymerization P
NAS
DmeFBgn0001961
GO:0030589 pseudocleavage involved in syncytial blastoderm
formation
P
IMP
DmeFBgn0001961
GO:0033205 cell cycle cytokinesis P
IMP
SpoSPBC14C8.06
GO:0034314 Arp2/3 complex-mediated actin nucleation P
IDA
SpoSPBC14C8.06
GO:0040007 growth P
IMP
CelWBGene00000201
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000201
GO:0040011 locomotion P
IMP
CelWBGene00000201
GO:0040018 positive regulation of multicellular organism
growth
P
IMP
CelWBGene00000201
GO:0045010 actin nucleation P
IDA
SceS000000438
GO:0048308 organelle inheritance P
RCA
SceS000000438
GO:0051049 regulation of transport P
RCA
SceS000000438

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1964

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga10980 ENSANGP00000013885
Ashbya gossypii (Ago) ago3171 AFL022W
Arabidopsis thaliana (Ath) ath10077 At2g30910.1
Arabidopsis thaliana (Ath) ath10078 At2g30910.2
Arabidopsis thaliana (Ath) ath10125 At2g31300.1
Caenorhabditis elegans (Cel) cel20927 Y79H2A.6
(CE24672;
WBGene00000201)
Candida glabrata (Cgl) cgl3827 CAGL0K07095g