YOGY Home YOGY Help

Search term: YBR246W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRT2
SGD link S000000450
Alternative ID YBR246W
Description Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; null mutants display a weak carboxypeptidase Y missorting/secretion phenotype
Synonyms YBR246W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0280 A-DHYPE

KOGs classification KOGs description
METABOLISM Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g63010 GI:15242588
Drosophila melanogaster (Dme) 7290743 GI:7290743
Homo sapiens (Hsa) Hs14736039 GI:14736039
Saccharomyces cerevisiae (Sce) YBR246w
(S000000450)
GI:6319723 P38332
Schizosaccharomyces pombe (Spo) SPCC18.15 GI:19075894 O74865
Encephalitozoon cuniculi (Ecu) ECU07g0280 GI:19074450 Q8SV39
Arabidopsis thaliana (Ath) At5g63010 GI:15242588
Drosophila melanogaster (Dme) 7290743 GI:7290743
Homo sapiens (Hsa) Hs14736039 GI:14736039
Saccharomyces cerevisiae (Sce) YBR246w
(S000000450)
GI:6319723 P38332
Schizosaccharomyces pombe (Spo) SPCC18.15 GI:19075894 O74865
Encephalitozoon cuniculi (Ecu) ECU07g0280 GI:19074450 Q8SV39
Arabidopsis thaliana (Ath) At5g63010 GI:15242588
Drosophila melanogaster (Dme) 7290743 GI:7290743
Homo sapiens (Hsa) Hs14736039 GI:14736039
Saccharomyces cerevisiae (Sce) YBR246w
(S000000450)
GI:6319723 P38332
Schizosaccharomyces pombe (Spo) SPCC18.15 GI:19075894 O74865
Encephalitozoon cuniculi (Ecu) ECU07g0280 GI:19074450 Q8SV39


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000450
GO:0005634 nucleus C
IDA
SpoSPCC18.15
GO:0005829 cytosol C
IDA
SpoSPCC18.15
GO:0043234 protein complex C
NAS
SpoSPCC18.15
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt5g63010
GO:0000166 nucleotide binding F
ISS
AthAt5g63010
GO:0003674 molecular_function F
ND
SceS000000450
SpoSPCC18.15
GO:0006360 transcription from RNA polymerase I
promoter
P
ISS
SpoSPCC18.15
GO:0008150 biological_process P
ND
AthAt5g63010
SceS000000450

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
74607

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) YBR246W
(S000000450)
GI:6319723 P38332
Kluyveromyces lactis (Kla) KLLA0F06688g GI:50310723


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000450
GO:0003674 molecular_function F
ND
SceS000000450
GO:0008150 biological_process P
ND
SceS000000450

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2387

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga5065 ENSANGP00000016926
Ashbya gossypii (Ago) ago3152 AFL041C
Arabidopsis thaliana (Ath) ath28415 At5g63010.1
Caenorhabditis elegans (Cel) cel18822 Y43F4B.9
(CE28123;
WBGene00012806)
Candida glabrata (Cgl) cgl487 CAGL0C01661g
Cryptococcus neoformans (Cne) cne2629 181.m08856
Dictyostelium discoideum (Ddi) ddi2573 DDB0190862
Debaryomyces hansenii (Dha) dha1923 DEHA0C11110g
Drosophila melanogaster (Dme) dme16756 CG3184-PA
(FBgn0029892)
Danio rerio (Dre) dre19093 ENSDARP00000033633
Encephalitozoon cuniculi (Ecu) ecu1836 19074450
Takifugu rubripes (Fru) fru5711 SINFRUP00000130292
Gallus gallus (Gga) gga8179 ENSGALP00000014223
(WDR85)
Gallus gallus (Gga) gga8180 ENSGALP00000014279
Homo sapiens (Hsa) hsa32315 ENSP00000277540
(WDR85)
Q9BTV6
Kluyveromyces lactis (Kla) kla4383 KLLA0F06688g
Mus musculus (Mmu) mmu14177 ENSMUSP00000028351
(MGI:1914478)
Q9CYU6-1
Neurospora crassa (Ncr) ncr2321 NCU02388.2
Oryza sativa (Osa) osa82748 8195.m00152
Plasmodium falciparum (Pfa) pfa3044 PFF0395c
Rattus norvegicus (Rno) rno18244 ENSRNOP00000010791
Saccharomyces cerevisiae (Sce) sce522 YBR246W
(S000000450)
Schizosaccharomyces pombe (Spo) spo3095 SPCC18.15 O74865
Yarrowia lipolytica (Yli) yli3998 YALI0E03366g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1914478
SceS000000450
GO:0005634 nucleus C
IDA
SpoSPCC18.15
GO:0005829 cytosol C
IDA
SpoSPCC18.15
GO:0043234 protein complex C
NAS
SpoSPCC18.15
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthAt5g63010
GO:0000166 nucleotide binding F
ISS
AthAt5g63010
GO:0003674 molecular_function F
ND
MmuMGI:1914478
SceS000000450
SpoSPCC18.15
GO:0006360 transcription from RNA polymerase I
promoter
P
ISS
SpoSPCC18.15
GO:0008150 biological_process P
ND
AthAt5g63010
MmuMGI:1914478
SceS000000450

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC18.15
(O74865)
YBR246W
(S000000450)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000450
GO:0005634 nucleus C
IDA
SpoSPCC18.15
GO:0005829 cytosol C
IDA
SpoSPCC18.15
GO:0043234 protein complex C
NAS
SpoSPCC18.15
GO:0003674 molecular_function F
ND
SceS000000450
SpoSPCC18.15
GO:0006360 transcription from RNA polymerase I
promoter
P
ISS
SpoSPCC18.15
GO:0008150 biological_process P
ND
SceS000000450

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk