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Search term: YBR288C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name APM3
SGD link S000000492
Alternative ID YBR288C
Description Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkaline phosphatase to the vacuole via the alternate pathway
Synonyms YBR288C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2740 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Clathrin-associated protein medium chain

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g56590 GI:15223565
Caenorhabditis elegans (Cel) CE04654 GI:17568099
Drosophila melanogaster (Dme) 7290785 GI:7290785
Homo sapiens (Hsa) Hs5803000 GI:5803000 P53677
Homo sapiens (Hsa) Hs6912240
(AP3M1)		 GI:6912240 Q9Y2T2
Saccharomyces cerevisiae (Sce) YBR288c
(S000000492)		 GI:6319765 P38153
Schizosaccharomyces pombe (Spo) SPBC651.11c GI:19112301 O94669


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005764 lysosome C
TAS
HsaAP3M1
GO:0005816 spindle pole body C
IDA
SpoSPBC651.11c
GO:0005819 spindle C
IDA
SpoSPBC651.11c
GO:0030123 AP-3 adaptor complex C
ISS
SceS000000492
SpoSPBC651.11c
GO:0030125 clathrin vesicle coat C
ISS
AthAt1g56590
GO:0032153 cell division site C
IDA
SpoSPBC651.11c
GO:0051286 cell tip C
IDA
SpoSPBC651.11c
GO:0003674 molecular_function F
ND
SceS000000492
GO:0030276 clathrin binding F
ISS
SpoSPBC651.11c
GO:0006622 protein targeting to lysosome P
TAS
HsaAP3M1
GO:0006623 protein targeting to vacuole P
IGI
AthAt1g56590
GO:0006886 intracellular protein transport P
ISS
AthAt1g56590
GO:0006896 Golgi to vacuole transport P
IMP
SceS000000492
ISS
SpoSPBC651.11c
GO:0009630 gravitropism P
IMP
AthAt1g56590
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC651.11c
RCA
SceS000000492
TAS
SceS000000492
GO:0045184 establishment of protein localization P
RCA
SceS000000492

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38483

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) APM3
(S000000492)		 GI:6319765 P38153
Kluyveromyces lactis (Kla) KLLA0E18876g GI:50309577
Eremothecium gossypii (Ego) AGOS_AGL061W GI:45201035


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0030123 AP-3 adaptor complex C
ISS
SceS000000492
GO:0003674 molecular_function F
ND
SceS000000492
GO:0006896 Golgi to vacuole transport P
IMP
SceS000000492
GO:0016192 vesicle-mediated transport P
RCA
SceS000000492
TAS
SceS000000492
GO:0045184 establishment of protein localization P
RCA
SceS000000492

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_11592

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4250 AGL061W
Candida glabrata (Cgl) cgl4167 CAGL0L02145g
Debaryomyces hansenii (Dha) dha5952 DEHA0G05698g
Kluyveromyces lactis (Kla) kla3799 KLLA0E18876g
Neurospora crassa (Ncr) ncr3878 NCU03998.2
Saccharomyces cerevisiae (Sce) sce565 YBR288C
(S000000492)
Schizosaccharomyces pombe (Spo) spo2556 SPBC651.11c O94669
Yarrowia lipolytica (Yli) yli3443 YALI0D17776g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005816 spindle pole body C
IDA
SpoSPBC651.11c
GO:0005819 spindle C
IDA
SpoSPBC651.11c
GO:0030123 AP-3 adaptor complex C
ISS
SceS000000492
SpoSPBC651.11c
GO:0032153 cell division site C
IDA
SpoSPBC651.11c
GO:0051286 cell tip C
IDA
SpoSPBC651.11c
GO:0003674 molecular_function F
ND
SceS000000492
GO:0030276 clathrin binding F
ISS
SpoSPBC651.11c
GO:0006896 Golgi to vacuole transport P
IMP
SceS000000492
ISS
SpoSPBC651.11c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC651.11c
RCA
SceS000000492
TAS
SceS000000492
GO:0045184 establishment of protein localization P
RCA
SceS000000492

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC651.11c
(O94669)		 YBR288C
(S000000492)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005816 spindle pole body C
IDA
SpoSPBC651.11c
GO:0005819 spindle C
IDA
SpoSPBC651.11c
GO:0030123 AP-3 adaptor complex C
ISS
SceS000000492
SpoSPBC651.11c
GO:0032153 cell division site C
IDA
SpoSPBC651.11c
GO:0051286 cell tip C
IDA
SpoSPBC651.11c
GO:0003674 molecular_function F
ND
SceS000000492
GO:0030276 clathrin binding F
ISS
SpoSPBC651.11c
GO:0006896 Golgi to vacuole transport P
IMP
SceS000000492
ISS
SpoSPBC651.11c
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC651.11c
RCA
SceS000000492
TAS
SceS000000492
GO:0045184 establishment of protein localization P
RCA
SceS000000492

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