YOGY Home YOGY Help

Search term: YCL029C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BIK1
SGD link S000000534
Alternative ID YCL029C
Description Microtubule-associated protein, component of the interface between microtubules and kinetochore, involved in sister chromatid separation; essential in polyploid cells but not in haploid or diploid cells; ortholog of mammalian CLIP-170
Synonyms YCL029C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4568 -CDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGPOORLY CHARACTERIZED Cytoskeleton-associated protein and related proteins

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE03491 GI:17554226
Drosophila melanogaster (Dme) 7298379 GI:7298379 Q7KT48
Homo sapiens (Hsa) Hs4506751
(CLIP1)		 GI:4506751 O43667
Homo sapiens (Hsa) Hs14702162 GI:14702162 Q9UDT6
Homo sapiens (Hsa) Hs18378735 GI:18378735
Homo sapiens (Hsa) Hs18496983
(CLIP3)		 GI:18496983 Q96DZ5
Homo sapiens (Hsa) Hs20127631 GI:20127631
Homo sapiens (Hsa) Hs7427513 GI:7427513
Saccharomyces cerevisiae (Sce) YCL029c
(S000000534)		 GI:6319820 P11709
Saccharomyces cerevisiae (Sce) YPL174c
(S000006095)		 GI:6325083 P33420
Schizosaccharomyces pombe (Spo) SPAC27D7.13c GI:19115531 O42667
Schizosaccharomyces pombe (Spo) SPAC3C7.12 GI:19114525 P79065
Encephalitozoon cuniculi (Ecu) ECU06g0410 GI:19074291 Q8SVD8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000235 astral microtubule C
IDA
SceS000006095
GO:0000776 kinetochore C
IDA
SceS000000534
TAS
HsaCLIP1
GO:0000778 condensed nuclear chromosome kinetochore C
IDA
SceS000000534
GO:0005768 endosome C
TAS
HsaCLIP1
GO:0005816 spindle pole body C
IDA
SceS000000534
S000006095
SpoSPAC27D7.13c
GO:0005819 spindle C
IDA
SceS000000534
GO:0005829 cytosol C
IDA
SpoSPAC3C7.12
GO:0005869 dynactin complex C
IDA
SceS000006095
ISS
SpoSPAC27D7.13c
GO:0005876 spindle microtubule C
IDA
SceS000000534
GO:0005881 cytoplasmic microtubule C
IDA
SpoSPAC27D7.13c
GO:0005882 intermediate filament C
TAS
HsaCLIP1
GO:0005938 cell cortex C
IDA
SceS000006095
S000000534
GO:0015630 microtubule cytoskeleton C
IDA
SpoSPAC27D7.13c
SPAC3C7.12
TAS
HsaCLIP1
GO:0030981 cortical microtubule cytoskeleton C
IDA
SpoSPAC27D7.13c
GO:0043332 mating projection tip C
IDA
SceS000000534
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC3C7.12
GO:0051286 cell tip C
IDA
SpoSPAC3C7.12
GO:0005200 structural constituent of cytoskeleton F
RCA
SceS000000534
GO:0005515 protein binding F
IPI
HsaCLIP1
SpoSPAC27D7.13c
SPAC3C7.12
ISS
SceS000006095
GO:0008017 microtubule binding F
IGI
SceS000000534
ISS
SceS000006095
SpoSPAC27D7.13c
TAS
HsaCLIP1
GO:0042803 protein homodimerization activity F
TAS
HsaCLIP1
GO:0046872 metal ion binding F
NAS
HsaCLIP1
GO:0046982 protein heterodimerization activity F
IPI
SpoSPAC3C7.12
GO:0051010 microtubule plus-end binding F
NAS
SpoSPAC27D7.13c
TAS
SpoSPAC3C7.12
GO:0000022 mitotic spindle elongation P
IGI
SceS000000534
GO:0000092 mitotic anaphase B P
TAS
SceS000000534
GO:0000132 establishment of mitotic spindle
orientation		 P
IMP
SceS000006095
GO:0000226 microtubule cytoskeleton organization P
IMP
SpoSPAC3C7.12
GO:0000278 mitotic cell cycle P
RCA
SceS000000534
GO:0000279 M phase P
RCA
SceS000000534
GO:0000742 karyogamy involved in conjugation with cellular
fusion		 P
IMP
SceS000000534
GO:0000743 nuclear migration involved in conjugation with
cellular fusion		 P
IMP
SceS000000534
SpoSPAC27D7.13c
GO:0000753 cell morphogenesis involved in conjugation with
cellular fusion		 P
IGI
SpoSPAC27D7.13c
IMP
SpoSPAC27D7.13c
GO:0006461 protein complex assembly P
RCA
SceS000000534
GO:0007067 mitosis P
TAS
HsaCLIP1
GO:0007127 meiosis I P
IGI
SpoSPAC27D7.13c
GO:0007129 synapsis P
IMP
SpoSPAC27D7.13c
GO:0007131 reciprocal meiotic recombination P
IMP
SpoSPAC27D7.13c
GO:0007163 establishment or maintenance of cell
polarity		 P
IC
SpoSPAC3C7.12
GO:0010570 regulation of filamentous growth P
IMP
SpoSPAC3C7.12
GO:0030010 establishment of cell polarity P
NAS
SpoSPAC3C7.12
GO:0030437 ascospore formation P
IGI
SpoSPAC27D7.13c
IMP
SpoSPAC3C7.12
GO:0030472 mitotic spindle organization in
nucleus		 P
TAS
SceS000000534
GO:0030989 dynein-driven meiotic oscillatory nuclear
movement		 P
IMP
SpoSPAC27D7.13c
GO:0033554 cellular response to stress P
NAS
SpoSPAC3C7.12
GO:0034613 cellular protein localization P
IGI
SpoSPAC3C7.12
SPAC27D7.13c
GO:0046785 microtubule polymerization P
IGI
SpoSPAC3C7.12
GO:0048285 organelle fission P
RCA
SceS000000534
GO:0051129 negative regulation of cellular component
organization		 P
RCA
SceS000000534
GO:0051248 negative regulation of protein metabolic
process		 P
RCA
SceS000006095
S000000534
GO:0061161 positive regulation of establishment of bipolar
cell polarity resulting in cell
shape		 P
IMP
SpoSPAC3C7.12

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
74612

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) BIK1
(S000000534)		 GI:6319820 P11709
Kluyveromyces lactis (Kla) KLLA0C01474g GI:50304611


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000776 kinetochore C
IDA
SceS000000534
GO:0000778 condensed nuclear chromosome kinetochore C
IDA
SceS000000534
GO:0005816 spindle pole body C
IDA
SceS000000534
GO:0005819 spindle C
IDA
SceS000000534
GO:0005876 spindle microtubule C
IDA
SceS000000534
GO:0005938 cell cortex C
IDA
SceS000000534
GO:0043332 mating projection tip C
IDA
SceS000000534
GO:0005200 structural constituent of cytoskeleton F
RCA
SceS000000534
GO:0008017 microtubule binding F
IGI
SceS000000534
GO:0000022 mitotic spindle elongation P
IGI
SceS000000534
GO:0000092 mitotic anaphase B P
TAS
SceS000000534
GO:0000278 mitotic cell cycle P
RCA
SceS000000534
GO:0000279 M phase P
RCA
SceS000000534
GO:0000742 karyogamy involved in conjugation with cellular
fusion		 P
IMP
SceS000000534
GO:0000743 nuclear migration involved in conjugation with
cellular fusion		 P
IMP
SceS000000534
GO:0006461 protein complex assembly P
RCA
SceS000000534
GO:0030472 mitotic spindle organization in
nucleus		 P
TAS
SceS000000534
GO:0048285 organelle fission P
RCA
SceS000000534
GO:0051129 negative regulation of cellular component
organization		 P
RCA
SceS000000534
GO:0051248 negative regulation of protein metabolic
process		 P
RCA
SceS000000534

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_6370

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3895 AFR702W
Caenorhabditis elegans (Cel) cel12731 M01A8.2a
(CE33535;
WBGene00010796)
Caenorhabditis elegans (Cel) cel12732 M01A8.2b
(CE37262)
Candida glabrata (Cgl) cgl245 CAGL0B00924g
Candida glabrata (Cgl) cgl1385 CAGL0F03619g
Debaryomyces hansenii (Dha) dha1489 DEHA0C01287g
Danio rerio (Dre) dre27638 ENSDARP00000012218
Danio rerio (Dre) dre3228 ENSDARP00000037445
Kluyveromyces lactis (Kla) kla1260 KLLA0C01474g
Neurospora crassa (Ncr) ncr7203 NCU07400.2
Saccharomyces cerevisiae (Sce) sce610 YCL029C
(S000000534)
Schizosaccharomyces pombe (Spo) spo185 SPAC3C7.12 P79065
Yarrowia lipolytica (Yli) yli1634 YALI0B21384g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000776 kinetochore C
IDA
SceS000000534
GO:0000778 condensed nuclear chromosome kinetochore C
IDA
SceS000000534
GO:0005816 spindle pole body C
IDA
SceS000000534
GO:0005819 spindle C
IDA
SceS000000534
GO:0005829 cytosol C
IDA
SpoSPAC3C7.12
GO:0005876 spindle microtubule C
IDA
SceS000000534
GO:0005938 cell cortex C
IDA
SceS000000534
GO:0015630 microtubule cytoskeleton C
IDA
SpoSPAC3C7.12
GO:0043332 mating projection tip C
IDA
SceS000000534
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC3C7.12
GO:0051286 cell tip C
IDA
SpoSPAC3C7.12
GO:0005200 structural constituent of cytoskeleton F
RCA
SceS000000534
GO:0005515 protein binding F
IPI
SpoSPAC3C7.12
GO:0008017 microtubule binding F
IGI
SceS000000534
GO:0046982 protein heterodimerization activity F
IPI
SpoSPAC3C7.12
GO:0051010 microtubule plus-end binding F
TAS
SpoSPAC3C7.12
GO:0000022 mitotic spindle elongation P
IGI
SceS000000534
GO:0000092 mitotic anaphase B P
TAS
SceS000000534
GO:0000226 microtubule cytoskeleton organization P
IMP
SpoSPAC3C7.12
GO:0000278 mitotic cell cycle P
RCA
SceS000000534
GO:0000279 M phase P
RCA
SceS000000534
GO:0000742 karyogamy involved in conjugation with cellular
fusion		 P
IMP
SceS000000534
GO:0000743 nuclear migration involved in conjugation with
cellular fusion		 P
IMP
SceS000000534
GO:0006461 protein complex assembly P
RCA
SceS000000534
GO:0007163 establishment or maintenance of cell
polarity		 P
IC
SpoSPAC3C7.12
GO:0010570 regulation of filamentous growth P
IMP
SpoSPAC3C7.12
GO:0030010 establishment of cell polarity P
NAS
SpoSPAC3C7.12
GO:0030437 ascospore formation P
IMP
SpoSPAC3C7.12
GO:0030472 mitotic spindle organization in
nucleus		 P
TAS
SceS000000534
GO:0033554 cellular response to stress P
NAS
SpoSPAC3C7.12
GO:0034613 cellular protein localization P
IGI
SpoSPAC3C7.12
GO:0046785 microtubule polymerization P
IGI
SpoSPAC3C7.12
GO:0048285 organelle fission P
RCA
SceS000000534
GO:0051129 negative regulation of cellular component
organization		 P
RCA
SceS000000534
GO:0051248 negative regulation of protein metabolic
process		 P
RCA
SceS000000534
GO:0061161 positive regulation of establishment of bipolar
cell polarity resulting in cell
shape		 P
IMP
SpoSPAC3C7.12

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC3C7.12
(P79065)		 YCL029C
(S000000534)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000776 kinetochore C
IDA
SceS000000534
GO:0000778 condensed nuclear chromosome kinetochore C
IDA
SceS000000534
GO:0005816 spindle pole body C
IDA
SceS000000534
GO:0005819 spindle C
IDA
SceS000000534
GO:0005829 cytosol C
IDA
SpoSPAC3C7.12
GO:0005876 spindle microtubule C
IDA
SceS000000534
GO:0005938 cell cortex C
IDA
SceS000000534
GO:0015630 microtubule cytoskeleton C
IDA
SpoSPAC3C7.12
GO:0043332 mating projection tip C
IDA
SceS000000534
GO:0051285 cell cortex of cell tip C
IDA
SpoSPAC3C7.12
GO:0051286 cell tip C
IDA
SpoSPAC3C7.12
GO:0005200 structural constituent of cytoskeleton F
RCA
SceS000000534
GO:0005515 protein binding F
IPI
SpoSPAC3C7.12
GO:0008017 microtubule binding F
IGI
SceS000000534
GO:0046982 protein heterodimerization activity F
IPI
SpoSPAC3C7.12
GO:0051010 microtubule plus-end binding F
TAS
SpoSPAC3C7.12
GO:0000022 mitotic spindle elongation P
IGI
SceS000000534
GO:0000092 mitotic anaphase B P
TAS
SceS000000534
GO:0000226 microtubule cytoskeleton organization P
IMP
SpoSPAC3C7.12
GO:0000278 mitotic cell cycle P
RCA
SceS000000534
GO:0000279 M phase P
RCA
SceS000000534
GO:0000742 karyogamy involved in conjugation with cellular
fusion		 P
IMP
SceS000000534
GO:0000743 nuclear migration involved in conjugation with
cellular fusion		 P
IMP
SceS000000534
GO:0006461 protein complex assembly P
RCA
SceS000000534
GO:0007163 establishment or maintenance of cell
polarity		 P
IC
SpoSPAC3C7.12
GO:0010570 regulation of filamentous growth P
IMP
SpoSPAC3C7.12
GO:0030010 establishment of cell polarity P
NAS
SpoSPAC3C7.12
GO:0030437 ascospore formation P
IMP
SpoSPAC3C7.12
GO:0030472 mitotic spindle organization in
nucleus		 P
TAS
SceS000000534
GO:0033554 cellular response to stress P
NAS
SpoSPAC3C7.12
GO:0034613 cellular protein localization P
IGI
SpoSPAC3C7.12
GO:0046785 microtubule polymerization P
IGI
SpoSPAC3C7.12
GO:0048285 organelle fission P
RCA
SceS000000534
GO:0051129 negative regulation of cellular component
organization		 P
RCA
SceS000000534
GO:0051248 negative regulation of protein metabolic
process		 P
RCA
SceS000000534
GO:0061161 positive regulation of establishment of bipolar
cell polarity resulting in cell
shape		 P
IMP
SpoSPAC3C7.12

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk