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Search term: YCL037C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SRO9
SGD link S000000542
Alternative ID YCL037C
Description Cytoplasmic RNA-binding protein that associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif
Synonyms YCL037C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2590 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGINFORMATION STORAGE AND PROCESSING RNA-binding protein LARP/SRO9 and related La domain proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g35890 GI:7486390
Arabidopsis thaliana (Ath) At5g21160 GI:15242173
Arabidopsis thaliana (Ath) At5g66100 GI:15239264
Caenorhabditis elegans (Cel) CE28950 GI:17554676
Drosophila melanogaster (Dme) 7301667 GI:7301667
Homo sapiens (Hsa) Hs14149950 GI:14149950
Homo sapiens (Hsa) Hs22041373 GI:22041373
Homo sapiens (Hsa) Hs22049862 GI:22049862
Homo sapiens (Hsa) Hs8922390 GI:8922390
Saccharomyces cerevisiae (Sce) YCL037c
(S000000542)		 GI:6319812
Saccharomyces cerevisiae (Sce) YDR515w
(S000002923)		 GI:6320723 Q12034
Schizosaccharomyces pombe (Spo) SPAC1527.03 GI:19115466 Q9P6K0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt5g21160
GO:0005737 cytoplasm C
IDA
SceS000002923
ISS
SpoSPAC1527.03
GO:0005829 cytosol C
IDA
AthAt5g21160
SpoSPAC1527.03
GO:0005844 polysome C
IDA
SceS000000542
S000002923
ISS
SpoSPAC1527.03
GO:0003674 molecular_function F
ND
AthAt5g21160
At5g66100
GO:0003723 RNA binding F
IDA
SceS000000542
S000002923
ISS
SpoSPAC1527.03
GO:0006412 translation P
IPI
SceS000000542
ISS
SpoSPAC1527.03
GO:0006417 regulation of translation P
IGI
SceS000002923
IMP
SceS000002923
IPI
SceS000002923
RCA
SceS000000542
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000002923
IPI
SceS000002923
GO:0008150 biological_process P
ND
AthAt5g66100
At5g21160

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117748

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SRO9
(S000000542)		 GI:37362625
Saccharomyces cerevisiae (Sce) SLF1
(S000002923)		 GI:6320723 Q12034


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000002923
GO:0005844 polysome C
IDA
SceS000000542
S000002923
GO:0003723 RNA binding F
IDA
SceS000000542
S000002923
GO:0006412 translation P
IPI
SceS000000542
GO:0006417 regulation of translation P
IGI
SceS000002923
IMP
SceS000002923
IPI
SceS000002923
RCA
SceS000000542
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000002923
IPI
SceS000002923

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5571

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Arabidopsis thaliana (Ath) ath21752 At4g35890.1
Arabidopsis thaliana (Ath) ath28778 At5g66100.1
Candida glabrata (Cgl) cgl239 CAGL0B00792g
Candida glabrata (Cgl) cgl1259 CAGL0F00627g
Cryptococcus neoformans (Cne) cne3779 185.m02353
Debaryomyces hansenii (Dha) dha4315 DEHA0E24442g
Takifugu rubripes (Fru) fru27981 SINFRUP00000175816
Gallus gallus (Gga) gga17428 ENSGALP00000016575
Gallus gallus (Gga) gga17427 ENSGALP00000016578
(LARP2)
Mus musculus (Mmu) mmu16562 ENSMUSP00000037127
(MGI:1914604)		 Q8BVS5
Mus musculus (Mmu) mmu16561 ENSMUSP00000070987
Oryza sativa (Osa) osa5405 2188.m00161
Oryza sativa (Osa) osa5450 2188.m00190
Oryza sativa (Osa) osa39591 4996.m00066
Oryza sativa (Osa) osa73920 7282.m00193
Rattus norvegicus (Rno) rno15996 ENSRNOP00000018465
(RGD:1307509)
Saccharomyces cerevisiae (Sce) sce618 YCL037C
(S000000542)
Schizosaccharomyces pombe (Spo) spo1608 SPAC1527.03 Q9P6K0
Yarrowia lipolytica (Yli) yli2110 YALI0C09526g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1914604
GO:0005737 cytoplasm C
ISS
SpoSPAC1527.03
GO:0005829 cytosol C
IDA
SpoSPAC1527.03
GO:0005844 polysome C
IDA
SceS000000542
ISS
SpoSPAC1527.03
GO:0003674 molecular_function F
ND
AthAt5g66100
MmuMGI:1914604
GO:0003723 RNA binding F
IDA
SceS000000542
ISS
SpoSPAC1527.03
GO:0006412 translation P
IPI
SceS000000542
ISS
SpoSPAC1527.03
GO:0006417 regulation of translation P
RCA
SceS000000542
GO:0008150 biological_process P
ND
AthAt5g66100
MmuMGI:1914604

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1527.03
(Q9P6K0)		 YCL037C
(S000000542)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
ISS
SpoSPAC1527.03
GO:0005829 cytosol C
IDA
SpoSPAC1527.03
GO:0005844 polysome C
IDA
SceS000000542
ISS
SpoSPAC1527.03
GO:0003723 RNA binding F
IDA
SceS000000542
ISS
SpoSPAC1527.03
GO:0006412 translation P
IPI
SceS000000542
ISS
SpoSPAC1527.03
GO:0006417 regulation of translation P
RCA
SceS000000542

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