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Search term: YCL043C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PDI1
SGD link S000000548
Alternative ID YCL043C
Description Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen, essential for the formation of disulfide bonds in secretory and cell-surface proteins, unscrambles non-native disulfide bonds
Synonyms YCL043C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0190 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g21750 GI:15219086
Arabidopsis thaliana (Ath) At1g35620 GI:15219666
Arabidopsis thaliana (Ath) At1g52260 GI:15218191
Arabidopsis thaliana (Ath) At1g77510 GI:15223975
Arabidopsis thaliana (Ath) At3g16110 GI:15233287
Arabidopsis thaliana (Ath) At3g54960 GI:15233138
Arabidopsis thaliana (Ath) At3g62510 GI:15228782
Arabidopsis thaliana (Ath) At5g60640 GI:15239391
Caenorhabditis elegans (Cel) CE00073 GI:17552178
Caenorhabditis elegans (Cel) CE00897
(WBGene00003962)
GI:17554386 Q17967
Caenorhabditis elegans (Cel) CE03972
(WBGene00003963)
GI:17569137 Q17770
Caenorhabditis elegans (Cel) CE11570
(WBGene00003964)
GI:17507915 O17908
Drosophila melanogaster (Dme) 7294310
(FBgn0014002)
GI:17647799
Drosophila melanogaster (Dme) 7303555 GI:7303555
Homo sapiens (Hsa) Hs20070125
(P4HB)
GI:20070125 P07237
Homo sapiens (Hsa) Hs21361511 GI:14042477 Q6PKC3
Homo sapiens (Hsa) Hs21361657 GI:2507461 P30101
Homo sapiens (Hsa) Hs4758304
(PDIA4)
GI:4758304 P13667
Homo sapiens (Hsa) Hs5803119 GI:5803119
Homo sapiens (Hsa) HsM20127473 GI:20127473
Homo sapiens (Hsa) HsM7705698 GI:7705698
Saccharomyces cerevisiae (Sce) YCL043c
(S000000548)
GI:6319806 P17967
Saccharomyces cerevisiae (Sce) YDR518w
(S000002926)
GI:6320726 P32474
Schizosaccharomyces pombe (Spo) SPAC1F5.02 GI:19113783 Q10057
Encephalitozoon cuniculi (Ecu) ECU09g1560 GI:19173277
Arabidopsis thaliana (Ath) At1g21750 GI:15219086
Arabidopsis thaliana (Ath) At1g35620 GI:15219666
Arabidopsis thaliana (Ath) At1g52260 GI:15218191
Arabidopsis thaliana (Ath) At1g77510 GI:15223975
Arabidopsis thaliana (Ath) At3g16110 GI:15233287
Arabidopsis thaliana (Ath) At3g54960 GI:15233138
Arabidopsis thaliana (Ath) At3g62510 GI:15228782
Arabidopsis thaliana (Ath) At5g60640 GI:15239391
Caenorhabditis elegans (Cel) CE00073 GI:17552178
Caenorhabditis elegans (Cel) CE00897
(WBGene00003962)
GI:17554386 Q17967
Caenorhabditis elegans (Cel) CE03972
(WBGene00003963)
GI:17569137 Q17770
Caenorhabditis elegans (Cel) CE11570
(WBGene00003964)
GI:17507915 O17908
Drosophila melanogaster (Dme) 7294310
(FBgn0014002)
GI:17647799
Drosophila melanogaster (Dme) 7303555 GI:7303555
Homo sapiens (Hsa) Hs20070125
(P4HB)
GI:20070125 P07237
Homo sapiens (Hsa) Hs21361511 GI:14042477 Q6PKC3
Homo sapiens (Hsa) Hs21361657 GI:2507461 P30101
Homo sapiens (Hsa) Hs4758304
(PDIA4)
GI:4758304 P13667
Homo sapiens (Hsa) Hs5803119 GI:5803119
Homo sapiens (Hsa) HsM20127473 GI:20127473
Homo sapiens (Hsa) HsM7705698 GI:7705698
Saccharomyces cerevisiae (Sce) YCL043c
(S000000548)
GI:6319806 P17967
Saccharomyces cerevisiae (Sce) YDR518w
(S000002926)
GI:6320726 P32474
Schizosaccharomyces pombe (Spo) SPAC1F5.02 GI:19113783 Q10057
Encephalitozoon cuniculi (Ecu) ECU09g1560 GI:19173277
Arabidopsis thaliana (Ath) At1g21750 GI:15219086
Arabidopsis thaliana (Ath) At1g35620 GI:15219666
Arabidopsis thaliana (Ath) At1g52260 GI:15218191
Arabidopsis thaliana (Ath) At1g77510 GI:15223975
Arabidopsis thaliana (Ath) At3g16110 GI:15233287
Arabidopsis thaliana (Ath) At3g54960 GI:15233138
Arabidopsis thaliana (Ath) At3g62510 GI:15228782
Arabidopsis thaliana (Ath) At5g60640 GI:15239391
Caenorhabditis elegans (Cel) CE00073 GI:17552178
Caenorhabditis elegans (Cel) CE00897
(WBGene00003962)
GI:17554386 Q17967
Caenorhabditis elegans (Cel) CE03972
(WBGene00003963)
GI:17569137 Q17770
Caenorhabditis elegans (Cel) CE11570
(WBGene00003964)
GI:17507915 O17908
Drosophila melanogaster (Dme) 7294310
(FBgn0014002)
GI:17647799
Drosophila melanogaster (Dme) 7303555 GI:7303555
Homo sapiens (Hsa) Hs20070125
(P4HB)
GI:20070125 P07237
Homo sapiens (Hsa) Hs21361511 GI:14042477 Q6PKC3
Homo sapiens (Hsa) Hs21361657 GI:2507461 P30101
Homo sapiens (Hsa) Hs4758304
(PDIA4)
GI:4758304 P13667
Homo sapiens (Hsa) Hs5803119 GI:5803119
Homo sapiens (Hsa) HsM20127473 GI:20127473
Homo sapiens (Hsa) HsM7705698 GI:7705698
Saccharomyces cerevisiae (Sce) YCL043c
(S000000548)
GI:6319806 P17967
Saccharomyces cerevisiae (Sce) YDR518w
(S000002926)
GI:6320726 P32474
Schizosaccharomyces pombe (Spo) SPAC1F5.02 GI:19113783 Q10057
Encephalitozoon cuniculi (Ecu) ECU09g1560 GI:19173277


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000326 protein storage vacuole C
IDA
AthAt1g21750
GO:0000327 lytic vacuole within protein storage
vacuole
C
IDA
AthAt1g21750
GO:0005575 cellular_component C
ND
AthAt3g62510
GO:0005576 extracellular region C
NAS
HsaP4HB
GO:0005737 cytoplasm C
IDA
DmeFBgn0014002
GO:0005739 mitochondrion C
IDA
AthAt5g60640
GO:0005773 vacuole C
IDA
AthAt1g21750
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g77510
At1g35620
At3g16110
At5g60640
At1g52260
At1g21750
At3g54960
CelWBGene00003963
DmeFBgn0014002
HsaP4HB
SceS000002926
SpoSPAC1F5.02
GO:0005788 endoplasmic reticulum lumen C
IDA
SceS000000548
ISS
SpoSPAC1F5.02
NAS
DmeFBgn0014002
GO:0005793 ER-Golgi intermediate compartment C
IDA
HsaP4HB
GO:0005811 lipid particle C
IDA
DmeFBgn0014002
GO:0005886 plasma membrane C
IDA
AthAt1g35620
At3g54960
At1g77510
At5g60640
GO:0009505 plant-type cell wall C
IDA
AthAt1g35620
At1g21750
GO:0009507 chloroplast C
IDA
AthAt1g21750
At5g60640
At3g54960
At1g77510
GO:0009579 thylakoid C
IDA
AthAt1g21750
GO:0009986 cell surface C
IDA
HsaP4HB
GO:0016020 membrane C
IDA
AthAt1g21750
GO:0043025 neuronal cell body C
IDA
DmeFBgn0014002
GO:0045169 fusome C
IDA
DmeFBgn0014002
GO:0048471 perinuclear region of cytoplasm C
IDA
DmeFBgn0014002
GO:0060187 cell pole C
IDA
DmeFBgn0014002
GO:0070732 spindle envelope C
IDA
DmeFBgn0014002
GO:0003674 molecular_function F
ND
AthAt3g62510
GO:0003756 protein disulfide isomerase activity F
IDA
CelWBGene00003962
WBGene00003963
WBGene00003964
SceS000000548
S000002926
IGI
SceS000002926
IMP
SceS000000548
S000002926
ISS
AthAt1g35620
At3g16110
At3g54960
At5g60640
At1g21750
At1g52260
At1g77510
DmeFBgn0014002
SceS000002926
SpoSPAC1F5.02
GO:0003810 protein-glutamine gamma-glutamyltransferase
activity
F
IDA
CelWBGene00003962
WBGene00003963
WBGene00003964
GO:0004656 procollagen-proline 4-dioxygenase
activity
F
IDA
HsaP4HB
GO:0005515 protein binding F
IPI
HsaP4HB
PDIA4
GO:0015035 protein disulfide oxidoreductase
activity
F
IDA
SceS000000548
S000002926
IGI
SceS000002926
ISS
SceS000002926
SpoSPAC1F5.02
GO:0000003 reproduction P
IMP
CelWBGene00003963
GO:0001703 gastrulation with mouth forming
first
P
IMP
CelWBGene00003963
GO:0002119 nematode larval development P
IMP
CelWBGene00003963
GO:0006457 protein folding P
IGI
SceS000002926
IMP
SceS000000548
ISS
DmeFBgn0014002
SpoSPAC1F5.02
NAS
DmeFBgn0014002
GO:0006979 response to oxidative stress P
IDA
AthAt5g60640
GO:0007369 gastrulation P
IMP
CelWBGene00003963
GO:0008150 biological_process P
ND
AthAt3g62510
GO:0008360 regulation of cell shape P
IGI
CelWBGene00003964
GO:0009306 protein secretion P
TAS
HsaPDIA4
GO:0009651 response to salt stress P
IEP
AthAt1g21750
At1g77510
GO:0009790 embryo development P
IMP
AthAt1g21750
CelWBGene00003963
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00003963
GO:0010043 response to zinc ion P
IEP
AthAt1g21750
GO:0010171 body morphogenesis P
IGI
CelWBGene00003964
IMP
CelWBGene00003963
GO:0018401 peptidyl-proline hydroxylation to
4-hydroxy-L-proline
P
IDA
HsaP4HB
GO:0018991 oviposition P
IGI
CelWBGene00003964
GO:0034976 response to endoplasmic reticulum
stress
P
IEP
AthAt3g54960
At1g21750
At1g77510
GO:0035121 tail morphogenesis P
IGI
CelWBGene00003964
GO:0040002 collagen and cuticulin-based cuticle
development
P
IGI
CelWBGene00003964
IMP
CelWBGene00003964
GO:0040007 growth P
IMP
CelWBGene00003963
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003962
WBGene00003963
GO:0040011 locomotion P
IMP
CelWBGene00003963
GO:0040017 positive regulation of locomotion P
IMP
CelWBGene00003963
GO:0040018 positive regulation of multicellular organism
growth
P
IMP
CelWBGene00003964
GO:0040019 positive regulation of embryonic
development
P
IGI
CelWBGene00003964
GO:0043067 regulation of programmed cell death P
IMP
AthAt1g21750
GO:0044262 cellular carbohydrate metabolic
process
P
RCA
SceS000000548
GO:0045138 tail tip morphogenesis P
IGI
CelWBGene00003964
GO:0045454 cell redox homeostasis P
RCA
SceS000000548
GO:0046686 response to cadmium ion P
IEP
AthAt1g77510
GO:0048316 seed development P
IMP
AthAt1g21750

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
55495

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) P4HB GI:20070125 P07237
Pan troglodytes (Ptr) P4HB GI:114670984
Canis familiaris (Cfa) P4HB GI:73964749
Mus musculus (Mmu) P4hb
(MGI:97464)
GI:42415475 P09103
Rattus norvegicus (Rno) P4hb
(RGD:3244)
GI:6981324 41391
Gallus gallus (Gga) P4HB GI:118099885
Drosophila melanogaster (Dme) Pdi
(FBgn0014002)
GI:17647799
Anopheles gambiae (Aga) AgaP_AGAP012407 GI:158300147
Caenorhabditis elegans (Cel) pdi-2
(CE03972;
WBGene00003963)
GI:17569137 Q17770
Schizosaccharomyces pombe (Spo) SPAC1F5.02 GI:19113783 Q10057
Saccharomyces cerevisiae (Sce) PDI1
(S000000548)
GI:6319806 P17967
Kluyveromyces lactis (Kla) KLLA0C01111g GI:50304577
Eremothecium gossypii (Ego) AGOS_AFR718W GI:45199237
Magnaporthe grisea (Mgr) MGG_05753 GI:39941684
Neurospora crassa (Ncr) NCU09223.1 GI:32422343
Arabidopsis thaliana (Ath) ATPDIL1-4 GI:30697404
Arabidopsis thaliana (Ath) ATPDIL1-3 GI:22331799
Oryza sativa (Osa) Os02g0100100 GI:115443599
Plasmodium falciparum (Pfa) MAL8P1.17 GI:124512228