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Search term: YCR005C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CIT2
SGD link S000000598
Alternative ID YCR005C
Description Citrate synthase, catalyzes the condensation of acetyl coenzyme A and oxaloacetate to form citrate, peroxisomal isozyme involved in glyoxylate cycle; expression is controlled by Rtg1p and Rtg2p transcription factors
Synonyms YCR005C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2617 ACDHYP-

KOGs classification KOGs description
METABOLISM Citrate synthase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g11270 GI:15227425
Arabidopsis thaliana (Ath) At2g42790 GI:15228003
Arabidopsis thaliana (Ath) At2g44350 GI:7436692
Arabidopsis thaliana (Ath) At3g58740 GI:15231128
Arabidopsis thaliana (Ath) At3g58750 GI:15231130
Arabidopsis thaliana (Ath) At3g60100 GI:15232248
Caenorhabditis elegans (Cel) CE00513
(WBGene00000833)
GI:17555174 P34575
Drosophila melanogaster (Dme) 7290712 GI:7290712
Drosophila melanogaster (Dme) 7299562 GI:7299562
Homo sapiens (Hsa) Hs4758076 GI:4758076
Homo sapiens (Hsa) Hs17434182 GI:17434182
Homo sapiens (Hsa) Hs18562547 GI:18562547
Saccharomyces cerevisiae (Sce) YCR005c
(S000000598)
GI:6319850 P08679
Saccharomyces cerevisiae (Sce) YNR001c
(S000005284)
GI:6324328 P00890
Saccharomyces cerevisiae (Sce) YPR001w
(S000006205)
GI:6325257 P43635
Schizosaccharomyces pombe (Spo) SPAC6C3.04 GI:19114630 Q10306


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt2g11270
GO:0005618 cell wall C
IDA
AthAt2g44350
GO:0005739 mitochondrion C
IDA
AthAt2g44350
At3g60100
SceS000000598
S000006205
S000005284
SpoSPAC6C3.04
IPI
SceS000005284
TAS
AthAt2g44350
GO:0005759 mitochondrial matrix C
ISS
SpoSPAC6C3.04
GO:0005777 peroxisome C
IDA
AthAt3g58750
At2g42790
SceS000000598
ISS
AthAt3g58740
GO:0009507 chloroplast C
IDA
AthAt2g44350
GO:0004108 citrate (Si)-synthase activity F
IDA
AthAt2g44350
SceS000005284
S000006205
SpoSPAC6C3.04
IGI
AthAt3g58750
At2g42790
IMP
SceS000005284
S000006205
ISS
AthAt2g42790
At2g44350
At3g58740
At3g60100
At3g58750
TAS
SceS000000598
GO:0005524 ATP binding F
IDA
AthAt2g44350
GO:0008270 zinc ion binding F
IDA
AthAt2g44350
GO:0050440 2-methylcitrate synthase activity F
IDA
SceS000006205
IMP
SceS000006205
GO:0002119 nematode larval development P
IMP
CelWBGene00000833
GO:0006097 glyoxylate cycle P
TAS
SceS000000598
GO:0006099 tricarboxylic acid cycle P
IDA
SpoSPAC6C3.04
ISS
AthAt2g44350
At3g60100
At3g58740
At3g58750
At2g42790
TAS
AthAt2g44350
SceS000005284
S000006205
GO:0006101 citrate metabolic process P
IDA
SpoSPAC6C3.04
TAS
SceS000000598
S000005284
S000006205
GO:0006537 glutamate biosynthetic process P
ISS
SpoSPAC6C3.04
TAS
SceS000000598
S000005284
GO:0006635 fatty acid beta-oxidation P
IGI
AthAt3g58750
At2g42790
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00000833
GO:0019541 propionate metabolic process P
IEP
SceS000006205
GO:0019629 propionate catabolic process, 2-methylcitrate
cycle
P
IGI
SceS000006205
GO:0040007 growth P
IMP
CelWBGene00000833
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000833
GO:0044275 cellular carbohydrate catabolic
process
P
IC
SpoSPAC6C3.04
GO:0046356 acetyl-CoA catabolic process P
IDA
SceS000005284
IMP
SceS000005284
GO:0046686 response to cadmium ion P
IEP
AthAt2g44350
GO:0051186 cofactor metabolic process P
RCA
SceS000005284
GO:0055114 oxidation reduction P
RCA
SceS000005284

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
56073

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) CS GI:38327625
Pan troglodytes (Ptr) CS GI:114644121
Canis familiaris (Cfa) CS GI:73968367
Mus musculus (Mmu) Cs
(MGI:88529)
GI:13385942 Q0QEL9
Rattus norvegicus (Rno) Cs
(RGD:620330)
GI:18543177
Drosophila melanogaster (Dme) kdn GI:24640126
Anopheles gambiae (Aga) AgaP_AGAP012048 GI:158300600
Caenorhabditis elegans (Cel) cts-1
(CE00513;
WBGene00000833)
GI:17555174 P34575
Saccharomyces cerevisiae (Sce) CIT2
(S000000598)
GI:6319850 P08679
Arabidopsis thaliana (Ath) ATCS GI:30689693
Oryza sativa (Osa) Os02g0194100 GI:115444791
Oryza sativa (Osa) Os11g0538900 GI:115485775
Plasmodium falciparum (Pfa) PF10_0218 GI:124802537


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthATCS
GO:0005618 cell wall C
IDA
AthATCS
GO:0005634 nucleus C
IDA
AthATCS
GO:0005737 cytoplasm C
IDA
AthATCS
GO:0005739 mitochondrion C
IDA
AthATCS
MmuMGI:88529
SceS000000598
ISA
MmuMGI:88529
ISO
MmuMGI:88529
TAS
AthATCS
GO:0005759 mitochondrial matrix C
IDA
HsaCS
ISS
Dmekdn
PfaPF10_0218
GO:0005777 peroxisome C
IDA
SceS000000598
GO:0005783 endoplasmic reticulum C
IDA
AthATCS
GO:0005794 Golgi apparatus C
IDA
AthATCS
GO:0005834 heterotrimeric G-protein complex C
ISS
AthATCS
GO:0005875 microtubule associated complex C
IDA
Dmekdn
GO:0005886 plasma membrane C
IDA
AthATCS
GO:0009507 chloroplast C
IDA
AthATCS
GO:0030173 integral to Golgi membrane C
IDA
AthATCS
GO:0080008 CUL4 RING ubiquitin ligase complex C
ISS
AthATCS
GO:0000166 nucleotide binding F
ISS
AthATCS
GO:0003676 nucleic acid binding F
ISS
AthATCS
GO:0004108 citrate (Si)-synthase activity F
IDA
AthATCS
Dmekdn
HsaCS
ISA
MmuMGI:88529
ISO
MmuMGI:88529
ISS
AthATCS
Dmekdn
PfaPF10_0218
TAS
SceS000000598
GO:0005524 ATP binding F
IDA
AthATCS
GO:0008270 zinc ion binding F
IDA
AthATCS
GO:0016740 transferase activity F
ISS
AthATCS
GO:0016757 transferase activity, transferring glycosyl
groups
F
ISS
AthATCS
GO:0016759 cellulose synthase activity F
ISS
AthATCS
GO:0046527 glucosyltransferase activity F
ISS
AthATCS
NAS
AthATCS
GO:0046912 transferase activity, transferring acyl groups,
acyl groups converted into alkyl on
transfer
F
IDA
MmuMGI:88529
GO:0051753 mannan synthase activity F
IDA
AthATCS
GO:0000271 polysaccharide biosynthetic process P
ISS
AthATCS
GO:0002119 nematode larval development P
IMP
CelWBGene00000833
GO:0005975 carbohydrate metabolic process P
IDA
HsaCS
GO:0006084 acetyl-CoA metabolic process P
ISO
MmuMGI:88529
GO:0006097 glyoxylate cycle P
TAS
SceS000000598
GO:0006099 tricarboxylic acid cycle P
ISO
MmuMGI:88529
ISS
AthATCS
Dmekdn
PfaPF10_0218
TAS
AthATCS
GO:0006101 citrate metabolic process P
ISO
MmuMGI:88529
ISS
PfaPF10_0218
TAS
SceS000000598
GO:0006107 oxaloacetate metabolic process P
ISO
MmuMGI:88529
GO:0006281 DNA repair P
IMP
AthATCS
GO:0006537 glutamate biosynthetic process P
TAS
SceS000000598
GO:0006970 response to osmotic stress P
IMP
AthATCS
GO:0008150 biological_process P
ND
AthATCS
GO:0008152 metabolic process P
IDA
MmuMGI:88529
ISA
MmuMGI:88529
GO:0009294 DNA mediated transformation P
IMP
AthATCS
GO:0009409 response to cold P
IEP
AthATCS
IMP
AthATCS
GO:0009414 response to water deprivation P
IMP
AthATCS
GO:0009617 response to bacterium P
IMP
AthATCS
GO:0009651 response to salt stress P
IMP
AthATCS
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00000833
GO:0009832 plant-type cell wall biogenesis P
ISS
AthATCS
GO:0009846 pollen germination P
IMP
AthATCS
GO:0010224 response to UV-B P
IMP
AthATCS
GO:0032508 DNA duplex unwinding P
IDA
AthATCS
GO:0040007 growth P
IMP
CelWBGene00000833
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000833
GO:0042546 cell wall biogenesis P
NAS
AthATCS
GO:0046686 response to cadmium ion P
IEP
AthATCS
GO:0048367 shoot development P
IMP
AthATCS
GO:0048767 root hair elongation P
IMP
AthATCS
GO:0048868 pollen tube development P
IMP
AthATCS

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