Search term: YCR014C

Gene summary:

KOG results:

KOG name	Phylogenetic pattern (and link to KOGs with this pattern)
KOG2534	A--HYP-

KOGs classification	KOGs description
INFORMATION STORAGE AND PROCESSING	DNA polymerase IV (family X)

Species	KOG link	NCBI link	UniProt link
Arabidopsis thaliana (Ath)	At1g10520	GI:15218555
Homo sapiens (Hsa)	Hs7019491 (POLL)	GI:7019491	Q9UGP5
Homo sapiens (Hsa)	Hs7019493 (POLM)	GI:7019493	Q9NP87
Homo sapiens (Hsa)	Hs17489401	GI:17489401
Homo sapiens (Hsa)	Hs4505931 (POLB)	GI:4505931	P06746
Homo sapiens (Hsa)	Hs4758186	GI:4758186
Saccharomyces cerevisiae (Sce)	YCR014c (S000000607)	GI:10383782	P25615
Schizosaccharomyces pombe (Spo)	SPAC2F7.06c	GI:19113889	Q09693

GO terms for KOG results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Spo SPAC2F7.06c ISS Spo SPAC2F7.06c NAS Hsa POLL TAS Sce S000000607
GO:0005654	nucleoplasm	C	EXP Hsa POLB
GO:0005737	cytoplasm	C	IDA Hsa POLB
GO:0005829	cytosol	C	IDA Spo SPAC2F7.06c
GO:0005874	microtubule	C	IDA Hsa POLB
GO:0005876	spindle microtubule	C	IDA Hsa POLB
GO:0000166	nucleotide binding	F	TAS Spo SPAC2F7.06c
GO:0003677	DNA binding	F	NAS Hsa POLL
GO:0003887	DNA-directed DNA polymerase activity	F	EXP Hsa POLB IDA Hsa POLB Spo SPAC2F7.06c ISS Ath At1g10520 NAS Hsa POLL TAS Sce S000000607
GO:0003899	DNA-directed RNA polymerase activity	F	IDA Spo SPAC2F7.06c
GO:0005515	protein binding	F	IPI Hsa POLB
GO:0008017	microtubule binding	F	IDA Hsa POLB
GO:0016829	lyase activity	F	IDA Hsa POLB
GO:0019899	enzyme binding	F	IPI Hsa POLB
GO:0051575	5'-deoxyribose-5-phosphate lyase activity	F	IDA Spo SPAC2F7.06c
GO:0006260	DNA replication	P	NAS Hsa POLL
GO:0006261	DNA-dependent DNA replication	P	TAS Hsa POLB
GO:0006281	DNA repair	P	TAS Hsa POLB
GO:0006284	base-excision repair	P	IDA Hsa POLB
GO:0006287	base-excision repair, gap-filling	P	TAS Sce S000000607 Spo SPAC2F7.06c
GO:0006289	nucleotide-excision repair	P	IDA Hsa POLL
GO:0006302	double-strand break repair	P	IDA Sce S000000607
GO:0006303	double-strand break repair via nonhomologous end joining	P	IDA Sce S000000607 IMP Sce S000000607 TAS Spo SPAC2F7.06c
GO:0016446	somatic hypermutation of immunoglobulin genes	P	NAS Hsa POLL

HomoloGene results:

HomoloGene cluster	Phylogenetic pattern
68602

Species	Gene ID	NCBI link	UniProt link
Saccharomyces cerevisiae (Sce)	POL4 (S000000607)	GI:10383782	P25615
Kluyveromyces lactis (Kla)	KLLA0A11033g	GI:50303085
Eremothecium gossypii (Ego)	AGOS_AEL039W	GI:45190568

GO terms for Homologene results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	TAS Sce S000000607
GO:0003887	DNA-directed DNA polymerase activity	F	TAS Sce S000000607
GO:0006287	base-excision repair, gap-filling	P	TAS Sce S000000607
GO:0006302	double-strand break repair	P	IDA Sce S000000607
GO:0006303	double-strand break repair via nonhomologous end joining	P	IDA Sce S000000607 IMP Sce S000000607

OrthoMCL results:

OrthoMCL cluster	Phylogenetic pattern
OG1_5292

Species	OrthoMCL sequence	Model organism protein page	UniProt link
Ashbya gossypii (Ago)	ago2467	AEL039W
Arabidopsis thaliana (Ath)	ath1089	At1g10520.1
Candida glabrata (Cgl)	cgl4416	CAGL0L07700g
Cryptococcus neoformans (Cne)	cne113	162.m02411
Danio rerio (Dre)	dre30880	ENSDARP00000006373
Takifugu rubripes (Fru)	fru28146	SINFRUP00000134869
Gallus gallus (Gga)	gga20751	ENSGALP00000012558 (POLL)	Q5ZKZ0
Gallus gallus (Gga)	gga20752	ENSGALP00000012559
Homo sapiens (Hsa)	hsa4488	ENSP00000299206 (POLL)	Q9UGP5
Homo sapiens (Hsa)	hsa4489	ENSP00000299207
Kluyveromyces lactis (Kla)	kla477	KLLA0A11033g
Mus musculus (Mmu)	mmu13822	ENSMUSP00000026239 (MGI:1889000)	Q9QXE2
Neurospora crassa (Ncr)	ncr7263	NCU07461.2
Rattus norvegicus (Rno)	rno4183	ENSRNOP00000023137 (RGD:1308053)	Q5RKI3
Saccharomyces cerevisiae (Sce)	sce667	YCR014C (S000000607)
Schizosaccharomyces pombe (Spo)	spo2181	SPAC2F7.06c	Q09693
Yarrowia lipolytica (Yli)	yli3224	YALI0D12364g

GO terms for OrthoMCL results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Spo SPAC2F7.06c ISS Spo SPAC2F7.06c TAS Sce S000000607
GO:0005829	cytosol	C	IDA Spo SPAC2F7.06c
GO:0000166	nucleotide binding	F	TAS Spo SPAC2F7.06c
GO:0003887	DNA-directed DNA polymerase activity	F	IDA Mmu MGI:1889000 Spo SPAC2F7.06c ISA Mmu MGI:1889000 ISS Ath At1g10520 TAS Sce S000000607
GO:0003899	DNA-directed RNA polymerase activity	F	IDA Spo SPAC2F7.06c
GO:0051575	5'-deoxyribose-5-phosphate lyase activity	F	IDA Spo SPAC2F7.06c
GO:0006287	base-excision repair, gap-filling	P	ISA Mmu MGI:1889000 TAS Sce S000000607 Spo SPAC2F7.06c
GO:0006289	nucleotide-excision repair	P	ISS Mmu MGI:1889000
GO:0006302	double-strand break repair	P	IDA Sce S000000607
GO:0006303	double-strand break repair via nonhomologous end joining	P	IDA Sce S000000607 IMP Sce S000000607 TAS Spo SPAC2F7.06c
GO:0008152	metabolic process	P	IDA Mmu MGI:1889000

Curated yeast ortholog results:

S. pombe systematic ID	S. cerevisiae systematic ID
SPAC2F7.06c (Q09693)	YCR014C (S000000607)

GO terms for curated homolog results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Spo SPAC2F7.06c ISS Spo SPAC2F7.06c TAS Sce S000000607
GO:0005829	cytosol	C	IDA Spo SPAC2F7.06c
GO:0000166	nucleotide binding	F	TAS Spo SPAC2F7.06c
GO:0003887	DNA-directed DNA polymerase activity	F	IDA Spo SPAC2F7.06c TAS Sce S000000607
GO:0003899	DNA-directed RNA polymerase activity	F	IDA Spo SPAC2F7.06c
GO:0051575	5'-deoxyribose-5-phosphate lyase activity	F	IDA Spo SPAC2F7.06c
GO:0006287	base-excision repair, gap-filling	P	TAS Sce S000000607 Spo SPAC2F7.06c
GO:0006302	double-strand break repair	P	IDA Sce S000000607
GO:0006303	double-strand break repair via nonhomologous end joining	P	IDA Sce S000000607 IMP Sce S000000607 TAS Spo SPAC2F7.06c