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Search term: YCR039C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MATALPHA2
SGD link S000000635
Alternative ID YCR039C
Description Homeobox-domain protein that, with Mcm1p, represses a-specific genes in haploids; acts with A1p to repress transcription of haploid-specific genes in diploids; one of two genes encoded by the MATalpha mating type cassette
Synonyms YCR039C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0773 ACDHY-E

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription factor MEIS1 and related HOX domain proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g19700 GI:15223627
Arabidopsis thaliana (Ath) At1g23370 GI:15220722
Arabidopsis thaliana (Ath) At1g23380 GI:15220726
Arabidopsis thaliana (Ath) At1g62360 GI:15220767
Arabidopsis thaliana (Ath) At1g62990 GI:15221645
Arabidopsis thaliana (Ath) At1g70510 GI:15223167
Arabidopsis thaliana (Ath) At1g75410 GI:15222227
Arabidopsis thaliana (Ath) At1g75430 GI:15222231
Arabidopsis thaliana (Ath) At2g16400 GI:15227193
Arabidopsis thaliana (Ath) At2g23760 GI:15224060
Arabidopsis thaliana (Ath) At2g27220 GI:15225858
Arabidopsis thaliana (Ath) At2g27990 GI:15226313
Arabidopsis thaliana (Ath) At2g35940 GI:15227535
Arabidopsis thaliana (Ath) At4g08150 GI:15236418
Arabidopsis thaliana (Ath) At4g32040 GI:15236649
Arabidopsis thaliana (Ath) At4g32980 GI:15234005
Arabidopsis thaliana (Ath) At4g34610 GI:15236156
Arabidopsis thaliana (Ath) At4g36870 GI:15234555
Arabidopsis thaliana (Ath) At5g02030 GI:15241667
Arabidopsis thaliana (Ath) At5g11060 GI:15238942
Arabidopsis thaliana (Ath) At5g25220 GI:15238743
Arabidopsis thaliana (Ath) At5g41410 GI:15238073
Caenorhabditis elegans (Cel) CE17526 GI:17505915
Caenorhabditis elegans (Cel) CE17813 GI:17567555
Caenorhabditis elegans (Cel) CE21219
(WBGene00006796)		 GI:17564920
Caenorhabditis elegans (Cel) CE21220 GI:17564922
Drosophila melanogaster (Dme) 7294553 GI:7294553 Q9VU01
Drosophila melanogaster (Dme) 7294554 GI:19860750
Drosophila melanogaster (Dme) 7294555 GI:19863700
Drosophila melanogaster (Dme) 7296241 GI:19920444
Drosophila melanogaster (Dme) 7299340 GI:7299340
Drosophila melanogaster (Dme) 7303441 GI:17647121
Homo sapiens (Hsa) Hs11141881
(TGIF2)		 GI:11141881 Q9GZN2
Homo sapiens (Hsa) Hs11545769 GI:11545769
Homo sapiens (Hsa) Hs17482658 GI:17482658
Homo sapiens (Hsa) Hs18545547 GI:18545547
Homo sapiens (Hsa) Hs18575786 GI:18575786
Homo sapiens (Hsa) Hs18588030 GI:18588030
Homo sapiens (Hsa) Hs20373173 GI:20373173
Homo sapiens (Hsa) Hs20548500_2 GI:20548500
Homo sapiens (Hsa) Hs21245108 GI:14719974
Homo sapiens (Hsa) Hs22047130 GI:22047130
Homo sapiens (Hsa) Hs22050723 GI:22050723
Homo sapiens (Hsa) Hs22063067 GI:16416147 Q9H921
Homo sapiens (Hsa) Hs22065364 GI:22065364
Homo sapiens (Hsa) Hs4505151
(MEIS1)		 GI:4505151 O00470
Homo sapiens (Hsa) Hs4507473 GI:4507473 Q15583
Homo sapiens (Hsa) Hs4758930 GI:4758930
Homo sapiens (Hsa) Hs5031807 GI:5031807
Homo sapiens (Hsa) Hs7705555
(IRX4)		 GI:7705555 P78413
Homo sapiens (Hsa) Hs9910356 GI:9910356
Saccharomyces cerevisiae (Sce) YCL067c
(S000000572)		 GI:6319785 P01367
Saccharomyces cerevisiae (Sce) YCR039c
(S000000635)		 GI:6319887
Saccharomyces cerevisiae (Sce) YCR096c
(S000000692)		 GI:6319939 Q6B184
Saccharomyces cerevisiae (Sce) YGL096w
(S000003064)		 GI:6321342 P53147
Saccharomyces cerevisiae (Sce) YPL177c
(S000006098)		 GI:6325080 P41817
Encephalitozoon cuniculi (Ecu) ECU06g0740 GI:19074324
Encephalitozoon cuniculi (Ecu) ECU10g1480 GI:19074757
Arabidopsis thaliana (Ath) At1g19700 GI:15223627
Arabidopsis thaliana (Ath) At1g23370 GI:15220722
Arabidopsis thaliana (Ath) At1g23380 GI:15220726
Arabidopsis thaliana (Ath) At1g62360 GI:15220767
Arabidopsis thaliana (Ath) At1g62990 GI:15221645
Arabidopsis thaliana (Ath) At1g70510 GI:15223167
Arabidopsis thaliana (Ath) At1g75410 GI:15222227
Arabidopsis thaliana (Ath) At1g75430 GI:15222231
Arabidopsis thaliana (Ath) At2g16400 GI:15227193
Arabidopsis thaliana (Ath) At2g23760 GI:15224060
Arabidopsis thaliana (Ath) At2g27220 GI:15225858
Arabidopsis thaliana (Ath) At2g27990 GI:15226313
Arabidopsis thaliana (Ath) At2g35940 GI:15227535
Arabidopsis thaliana (Ath) At4g08150 GI:15236418
Arabidopsis thaliana (Ath) At4g32040 GI:15236649
Arabidopsis thaliana (Ath) At4g32980 GI:15234005
Arabidopsis thaliana (Ath) At4g34610 GI:15236156
Arabidopsis thaliana (Ath) At4g36870 GI:15234555
Arabidopsis thaliana (Ath) At5g02030 GI:15241667
Arabidopsis thaliana (Ath) At5g11060 GI:15238942
Arabidopsis thaliana (Ath) At5g25220 GI:15238743
Arabidopsis thaliana (Ath) At5g41410 GI:15238073
Caenorhabditis elegans (Cel) CE17526 GI:17505915
Caenorhabditis elegans (Cel) CE17813 GI:17567555
Caenorhabditis elegans (Cel) CE21219
(WBGene00006796)		 GI:17564920
Caenorhabditis elegans (Cel) CE21220 GI:17564922
Drosophila melanogaster (Dme) 7294553 GI:7294553 Q9VU01
Drosophila melanogaster (Dme) 7294554 GI:19860750
Drosophila melanogaster (Dme) 7294555 GI:19863700
Drosophila melanogaster (Dme) 7296241 GI:19920444
Drosophila melanogaster (Dme) 7299340 GI:7299340
Drosophila melanogaster (Dme) 7303441 GI:17647121
Homo sapiens (Hsa) Hs11141881
(TGIF2)		 GI:11141881 Q9GZN2
Homo sapiens (Hsa) Hs11545769 GI:11545769
Homo sapiens (Hsa) Hs17482658 GI:17482658
Homo sapiens (Hsa) Hs18545547 GI:18545547
Homo sapiens (Hsa) Hs18575786 GI:18575786
Homo sapiens (Hsa) Hs18588030 GI:18588030
Homo sapiens (Hsa) Hs20373173 GI:20373173
Homo sapiens (Hsa) Hs20548500_2 GI:20548500
Homo sapiens (Hsa) Hs21245108 GI:14719974
Homo sapiens (Hsa) Hs22047130 GI:22047130
Homo sapiens (Hsa) Hs22050723 GI:22050723
Homo sapiens (Hsa) Hs22063067 GI:16416147 Q9H921
Homo sapiens (Hsa) Hs22065364 GI:22065364
Homo sapiens (Hsa) Hs4505151
(MEIS1)		 GI:4505151 O00470
Homo sapiens (Hsa) Hs4507473 GI:4507473 Q15583
Homo sapiens (Hsa) Hs4758930 GI:4758930
Homo sapiens (Hsa) Hs5031807 GI:5031807
Homo sapiens (Hsa) Hs7705555
(IRX4)		 GI:7705555 P78413
Homo sapiens (Hsa) Hs9910356 GI:9910356
Saccharomyces cerevisiae (Sce) YCL067c
(S000000572)		 GI:6319785 P01367
Saccharomyces cerevisiae (Sce) YCR039c
(S000000635)		 GI:6319887
Saccharomyces cerevisiae (Sce) YCR096c
(S000000692)		 GI:6319939 Q6B184
Saccharomyces cerevisiae (Sce) YGL096w
(S000003064)		 GI:6321342 P53147
Saccharomyces cerevisiae (Sce) YPL177c
(S000006098)		 GI:6325080 P41817
Encephalitozoon cuniculi (Ecu) ECU06g0740 GI:19074324
Encephalitozoon cuniculi (Ecu) ECU10g1480 GI:19074757


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000003064
GO:0005575 cellular_component C
ND
SceS000000692
GO:0005634 nucleus C
IDA
AthAt1g75410
At4g32040
At4g32980
At1g70510
At1g62990
At1g62360
At2g35940
At5g02030
At5g11060
At5g25220
At5g41410
ISS
AthAt1g75410
At1g19700
At4g08150
SceS000006098
NAS
AthAt5g11060
TAS
HsaTGIF2
SceS000000635
S000000572
GO:0005737 cytoplasm C
IDA
AthAt2g35940
NAS
AthAt5g11060
GO:0005829 cytosol C
IDA
AthAt5g02030
At5g11060
At5g25220
At5g41410
GO:0003677 DNA binding F
IDA
AthAt2g35940
ISS
AthAt1g75410
At2g27220
At2g23760
At4g32980
At2g27990
At1g62990
At1g23380
At2g35940
At2g16400
At1g19700
At4g34610
At4g36870
At5g02030
At5g41410
GO:0003682 chromatin binding F
IDA
SceS000003064
GO:0003700 transcription factor activity F
ISS
AthAt1g75410
At2g23760
At2g27990
At1g62360
At2g27220
At1g75430
At4g32040
At4g08150
At4g32980
At1g62990
At2g16400
At2g35940
At1g70510
At1g19700
At1g23380
At4g34610
At4g36870
At5g02030
At5g11060
At5g25220
At5g41410
NAS
HsaTGIF2
GO:0003702 RNA polymerase II transcription factor
activity		 F
TAS
HsaMEIS1
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
ISS
SceS000006098
GO:0003714 transcription corepressor activity F
TAS
SceS000000572
S000000635
GO:0005515 protein binding F
IPI
AthAt5g41410
CelWBGene00006796
HsaMEIS1
GO:0008301 DNA bending activity F
IDA
SceS000000635
GO:0016563 transcription activator activity F
IMP
SceS000006098
ISS
AthAt1g23380
At4g32040
At1g62990
At5g11060
At5g25220
GO:0016564 transcription repressor activity F
IMP
SceS000006098
RCA
SceS000003064
GO:0042803 protein homodimerization activity F
IPI
AthAt2g35940
GO:0043565 sequence-specific DNA binding F
IDA
AthAt4g32980
At5g02030
SceS000000635
S000006098
S000000692
S000003064
GO:0046982 protein heterodimerization activity F
IPI
AthAt2g35940
GO:0000003 reproduction P
IMP
CelWBGene00006796
GO:0001708 cell fate specification P
IMP
AthAt4g08150
GO:0006355 regulation of transcription, DNA-dependent P
ISS
AthAt1g75410
At1g19700
NAS
HsaTGIF2
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
TAS
SceS000000572
S000000635
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
SceS000006098
GO:0006878 cellular copper ion homeostasis P
IMP
SceS000006098
GO:0007389 pattern specification process P
IGI
AthAt2g27990
IMP
AthAt5g02030
GO:0007501 mesodermal cell fate specification P
IGI
CelWBGene00006796
IMP
CelWBGene00006796
GO:0007530 sex determination P
RCA
SceS000000635
S000000572
S000000692
GO:0007532 regulation of transcription, mating-type
specific		 P
TAS
SceS000000635
S000000572
GO:0007535 donor selection P
TAS
SceS000000572
S000000635
GO:0008150 biological_process P
ND
SceS000000692
S000003064
GO:0008285 negative regulation of cell proliferation P
IMP
AthAt4g32980
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00006796
GO:0009416 response to light stimulus P
IEP
AthAt5g25220
At5g11060
GO:0009610 response to symbiotic fungus P
IEP
AthAt2g35940
GO:0009640 photomorphogenesis P
IDA
AthAt4g32980
GO:0009691 cytokinin biosynthetic process P
TAS
AthAt1g62360
GO:0009722 detection of cytokinin stimulus P
IEP
AthAt5g25220
GO:0009723 response to ethylene stimulus P
IGI
AthAt1g70510
GO:0009727 detection of ethylene stimulus P
IEP
AthAt4g32040
GO:0009736 cytokinin mediated signaling pathway P
IMP
AthAt1g70510
GO:0009737 response to abscisic acid stimulus P
IEP
AthAt2g35940
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00006796
GO:0009934 regulation of meristem structural
organization		 P
IMP
AthAt1g62360
GO:0009965 leaf morphogenesis P
IGI
AthAt2g23760
At4g36870
GO:0010051 xylem and phloem pattern formation P
IMP
AthAt4g08150
At5g02030
GO:0010073 meristem maintenance P
IGI
AthAt4g32980
At1g23380
GO:0010076 maintenance of floral meristem
identity		 P
IGI
AthAt2g27990
At5g02030
GO:0010077 maintenance of inflorescence meristem
identity		 P
IGI
AthAt2g27990
At5g02030
GO:0010089 xylem development P
IMP
AthAt1g62990
GO:0010094 specification of carpel identity P
IMP
AthAt1g70510
GO:0010154 fruit development P
IMP
AthAt5g02030
GO:0010171 body morphogenesis P
IMP
CelWBGene00006796
GO:0010197 polar nucleus fusion P
IMP
AthAt2g35940
GO:0010201 response to continuous far red light stimulus by
the high-irradiance response system		 P
IMP
AthAt2g35940
GO:0010223 secondary shoot formation P
IGI
AthAt2g27990
At5g02030
GO:0010227 floral organ abscission P
IMP
AthAt4g32980
GO:0010228 vegetative to reproductive phase transition of
meristem		 P
IGI
AthAt2g27990
At5g02030
IMP
AthAt4g32980
GO:0010229 inflorescence development P
IGI
AthAt2g27990
GO:0010371 regulation of gibberellin biosynthetic
process		 P
IMP
AthAt4g32980
GO:0016477 cell migration P
IMP
CelWBGene00006796
GO:0016481 negative regulation of transcription P
IMP
AthAt5g02030
GO:0018991 oviposition P
IMP
CelWBGene00006796
GO:0019827 stem cell maintenance P
TAS
AthAt1g62360
GO:0019915 lipid storage P
IMP
CelWBGene00006796
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00006796
GO:0040011 locomotion P
IMP
CelWBGene00006796
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00006796
GO:0042692 muscle cell differentiation P
IGI
CelWBGene00006796
IMP
CelWBGene00006796
GO:0045165 cell fate commitment P
IMP
AthAt4g08150
GO:0045449 regulation of transcription P
IMP
SceS000006098
GO:0045727 positive regulation of translation P
IMP
CelWBGene00006796
GO:0048367 shoot development P
IGI
AthAt5g02030
GO:0048440 carpel development P
IMP
AthAt1g62360
GO:0048457 floral whorl morphogenesis P
IMP
AthAt5g02030
GO:0048477 oogenesis P
IMP
CelWBGene00006796
GO:0048481 ovule development P
IMP
AthAt5g41410
GO:0048510 regulation of timing of transition from vegetative
to reproductive phase		 P
IMP
AthAt1g75410
GO:0048645 organ formation P
IGI
AthAt2g27990
At5g02030
GO:0071345 cellular response to cytokine stimulus P
IDA
AthAt5g25220
GO:0071369 cellular response to ethylene stimulus P
IDA
AthAt4g32040
GO:0080006 internode patterning P
IGI
AthAt2g27990
IMP
AthAt5g02030

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38492

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) HMLALPHA2
(S000000572)		 GI:6319785 P01367
Saccharomyces cerevisiae (Sce) MATALPHA2
(S000000635)		 GI:63536787
Saccharomyces cerevisiae (Sce) HMRA2
(S000000692)		 GI:6319939 Q6B184


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000692
GO:0005634 nucleus C
TAS
SceS000000635
S000000572
GO:0003714 transcription corepressor activity F
TAS
SceS000000572
S000000635
GO:0008301 DNA bending activity F
IDA
SceS000000635
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000635
S000000692
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
TAS
SceS000000572
S000000635
GO:0007530 sex determination P
RCA
SceS000000635
S000000572
S000000692
GO:0007532 regulation of transcription, mating-type
specific		 P
TAS
SceS000000635
S000000572
GO:0007535 donor selection P
TAS
SceS000000572
S000000635
GO:0008150 biological_process P
ND
SceS000000692

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17006

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Candida glabrata (Cgl) cgl215 CAGL0B00264g
Candida glabrata (Cgl) cgl259 CAGL0B01265g
Candida glabrata (Cgl) cgl954 CAGL0E00319g
Kluyveromyces lactis (Kla) kla1209 KLLA0C00374g
Saccharomyces cerevisiae (Sce) sce647 YCL067C
(S000000572)
Saccharomyces cerevisiae (Sce) sce698 YCR039C
(S000000635)
Saccharomyces cerevisiae (Sce) sce754 YCR096C
(S000000692)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000000692
GO:0005634 nucleus C
TAS
SceS000000635
S000000572
GO:0003714 transcription corepressor activity F
TAS
SceS000000572
S000000635
GO:0008301 DNA bending activity F
IDA
SceS000000635
GO:0043565 sequence-specific DNA binding F
IDA
SceS000000635
S000000692
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
TAS
SceS000000572
S000000635
GO:0007530 sex determination P
RCA
SceS000000635
S000000572
S000000692
GO:0007532 regulation of transcription, mating-type
specific		 P
TAS
SceS000000635
S000000572
GO:0007535 donor selection P
TAS
SceS000000572
S000000635
GO:0008150 biological_process P
ND
SceS000000692

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GO info in one table:

s.khadayate@ucl.ac.uk