YOGY Home YOGY Help

Search term: YCR053W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name THR4
SGD link S000000649
Alternative ID YCR053W
Description Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway
Synonyms YCR053W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2616 ---HYP-

KOGs classification KOGs description
METABOLISM Pyridoxalphosphate-dependent enzyme/predicted threonine synthase

Species KOG link NCBI link UniProt link
Homo sapiens (Hsa) Hs8922766 GI:8922766
Homo sapiens (Hsa) Hs13376251 GI:13376251
Saccharomyces cerevisiae (Sce) YCR053w
(S000000649)		 GI:6319901 P16120
Schizosaccharomyces pombe (Spo) SPAC9E9.06c GI:19115491 Q42598


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000649
SpoSPAC9E9.06c
ISS
SpoSPAC9E9.06c
GO:0005737 cytoplasm C
IDA
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0005829 cytosol C
IDA
SpoSPAC9E9.06c
GO:0004795 threonine synthase activity F
IMP
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0006417 regulation of translation P
RCA
SceS000000649
GO:0006566 threonine metabolic process P
IMP
SceS000000649
GO:0006897 endocytosis P
IMP
SceS000000649
GO:0009088 threonine biosynthetic process P
ISS
SpoSPAC9E9.06c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000000649

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5489

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) THNSL2 GI:149193323
Pan troglodytes (Ptr) THNSL2 GI:114578699
Canis familiaris (Cfa) THNSL2 GI:73980884
Mus musculus (Mmu) Thnsl2
(MGI:3041254)		 GI:76677925 Q80W22
Rattus norvegicus (Rno) Thnsl2 GI:57527088
Gallus gallus (Gga) THNSL2 GI:118090774
Schizosaccharomyces pombe (Spo) SPAC9E9.06c GI:19115491 Q42598
Saccharomyces cerevisiae (Sce) THR4
(S000000649)		 GI:6319901 P16120
Kluyveromyces lactis (Kla) KLLA0C09020g GI:50305283
Magnaporthe grisea (Mgr) MGG_08923 GI:145614182
Neurospora crassa (Ncr) NCU03425.1 GI:32404140


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
HsaTHNSL2
MmuMGI:3041254
GO:0005634 nucleus C
IDA
SceS000000649
SpoSPAC9E9.06c
ISS
SpoSPAC9E9.06c
GO:0005737 cytoplasm C
IDA
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0005829 cytosol C
IDA
SpoSPAC9E9.06c
GO:0003674 molecular_function F
ND
HsaTHNSL2
GO:0004795 threonine synthase activity F
IMP
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0030170 pyridoxal phosphate binding F
IDA
MmuMGI:3041254
GO:0006417 regulation of translation P
RCA
SceS000000649
GO:0006566 threonine metabolic process P
IMP
SceS000000649
GO:0006897 endocytosis P
IMP
SceS000000649
GO:0008150 biological_process P
ND
HsaTHNSL2
GO:0009088 threonine biosynthetic process P
ISS
SpoSPAC9E9.06c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000000649

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2890

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago245 AAR059C
Candida glabrata (Cgl) cgl3922 CAGL0K09328g
Cryptococcus neoformans (Cne) cne4682 186.m03534
Debaryomyces hansenii (Dha) dha5284 DEHA0F20240g
Danio rerio (Dre) dre25881 ENSDARP00000007029
Danio rerio (Dre) dre25341 ENSDARP00000023788
Escherichia coli (Eco) eco4 16127998
Takifugu rubripes (Fru) fru23797 SINFRUP00000155654
Gallus gallus (Gga) gga9570 ENSGALP00000012431
(GPR158)
Gallus gallus (Gga) gga18477 ENSGALP00000025641
(THNSL2)
Homo sapiens (Hsa) hsa3618 ENSP00000328525
Homo sapiens (Hsa) hsa18155 ENSP00000339563
(THNSL2)		 Q86YJ6-2
Homo sapiens (Hsa) hsa18154 ENSP00000351402
(THNSL2)		 Q86YJ6-1
Kluyveromyces lactis (Kla) kla1600 KLLA0C09020g
Mus musculus (Mmu) mmu14140 ENSMUSP00000052452
(MGI:2139347)		 Q8BH55
Mus musculus (Mmu) mmu22085 ENSMUSP00000067905
Mus musculus (Mmu) mmu22084 ENSMUSP00000073861
(MGI:3041254)		 Q80W22
Neurospora crassa (Ncr) ncr3320 NCU03425.2
Rattus norvegicus (Rno) rno21598 ENSRNOP00000008698
(RGD:1309144)		 Q5M7T9
Saccharomyces cerevisiae (Sce) sce714 YCR053W
(S000000649)
Schizosaccharomyces pombe (Spo) spo3193 SPAC9E9.06c Q42598
Yarrowia lipolytica (Yli) yli6319 YALI0F23221g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:3041254
MGI:2139347
GO:0005634 nucleus C
IDA
SceS000000649
SpoSPAC9E9.06c
ISS
SpoSPAC9E9.06c
GO:0005737 cytoplasm C
IDA
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0005829 cytosol C
IDA
SpoSPAC9E9.06c
GO:0003674 molecular_function F
ND
MmuMGI:2139347
GO:0004795 threonine synthase activity F
IMP
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0030170 pyridoxal phosphate binding F
IDA
MmuMGI:3041254
GO:0006417 regulation of translation P
RCA
SceS000000649
GO:0006566 threonine metabolic process P
IMP
SceS000000649
GO:0006897 endocytosis P
IMP
SceS000000649
GO:0008150 biological_process P
ND
MmuMGI:2139347
GO:0009088 threonine biosynthetic process P
ISS
SpoSPAC9E9.06c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000000649

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC9E9.06c
(Q42598)		 YCR053W
(S000000649)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000649
SpoSPAC9E9.06c
ISS
SpoSPAC9E9.06c
GO:0005737 cytoplasm C
IDA
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0005829 cytosol C
IDA
SpoSPAC9E9.06c
GO:0004795 threonine synthase activity F
IMP
SceS000000649
ISS
SpoSPAC9E9.06c
GO:0006417 regulation of translation P
RCA
SceS000000649
GO:0006566 threonine metabolic process P
IMP
SceS000000649
GO:0006897 endocytosis P
IMP
SceS000000649
GO:0009088 threonine biosynthetic process P
ISS
SpoSPAC9E9.06c
GO:0043094 cellular metabolic compound salvage P
RCA
SceS000000649

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk