YOGY Home YOGY Help

Search term: YCR086W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CSM1
SGD link S000000682
Alternative ID YCR086W
Description Nucleolar protein that forms a complex with Lrs4p and then Mam1p at kinetochores during meiosis I to mediate accurate homolog segregation; required for condensin recruitment to the replication fork barrier site and rDNA repeat segregation
Synonyms YCR086W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38543

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CSM1
(S000000682)		 GI:6319928
Kluyveromyces lactis (Kla) KLLA0F10241g GI:50311045
Eremothecium gossypii (Ego) AGOS_AGL235C GI:45200862


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SceS000000682
GO:0005730 nucleolus C
IDA
SceS000000682
GO:0033551 monopolin complex C
IDA
SceS000000682
GO:0003674 molecular_function F
ND
SceS000000682
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SceS000000682
GO:0045132 meiotic chromosome segregation P
IMP
SceS000000682
GO:0045143 homologous chromosome segregation P
IMP
SceS000000682
IPI
SceS000000682
GO:0070550 rDNA condensation P
IMP
SceS000000682

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24628

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4077 AGL235C
Candida glabrata (Cgl) cgl964 CAGL0E00539g
Debaryomyces hansenii (Dha) dha622 DEHA0A13904g
Kluyveromyces lactis (Kla) kla4546 KLLA0F10241g
Saccharomyces cerevisiae (Sce) sce742 YCR086W
(S000000682)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SceS000000682
GO:0005730 nucleolus C
IDA
SceS000000682
GO:0033551 monopolin complex C
IDA
SceS000000682
GO:0003674 molecular_function F
ND
SceS000000682
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SceS000000682
GO:0045132 meiotic chromosome segregation P
IMP
SceS000000682
GO:0045143 homologous chromosome segregation P
IMP
SceS000000682
IPI
SceS000000682
GO:0070550 rDNA condensation P
IMP
SceS000000682

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC11E3.03
(O13684)		 YCR086W
(S000000682)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000775 chromosome, centromeric region C
IDA
SpoSPAC11E3.03
GO:0000778 condensed nuclear chromosome kinetochore C
ISS
SpoSPAC11E3.03
GO:0005634 nucleus C
IDA
SpoSPAC11E3.03
GO:0005635 nuclear envelope C
IDA
SceS000000682
GO:0005730 nucleolus C
IDA
SceS000000682
ISS
SpoSPAC11E3.03
GO:0005829 cytosol C
IDA
SpoSPAC11E3.03
GO:0033551 monopolin complex C
IDA
SceS000000682
SpoSPAC11E3.03
GO:0003674 molecular_function F
ND
SceS000000682
SpoSPAC11E3.03
GO:0000070 mitotic sister chromatid segregation P
IMP
SpoSPAC11E3.03
GO:0034503 protein localization to nucleolar rDNA
repeats		 P
IMP
SceS000000682
GO:0045132 meiotic chromosome segregation P
IMP
SceS000000682
GO:0045143 homologous chromosome segregation P
IMP
SceS000000682
IPI
SceS000000682
GO:0045144 meiotic sister chromatid segregation P
IMP
SpoSPAC11E3.03
GO:0051315 attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid
segregation		 P
IMP
SpoSPAC11E3.03
GO:0051456 attachment of spindle microtubules to kinetochore
involved in meiotic sister chromatid
segregation		 P
IMP
SpoSPAC11E3.03
GO:0070550 rDNA condensation P
IMP
SceS000000682

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk