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Search term: YDL004W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ATP16
SGD link S000002162
Alternative ID YDL004W
Description Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated
Synonyms YDL004W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1758 ACDHYP-

KOGs classification KOGs description
METABOLISM Mitochondrial F1F0-ATP synthase, subunit delta/ATP16

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g47030 GI:15237998
Arabidopsis thaliana (Ath) AtCh029 GI:7525039 P09468
Caenorhabditis elegans (Cel) CE01976
(WBGene00019061)
GI:17534525 Q09544
Drosophila melanogaster (Dme) 7291126
(FBgn0028342)
GI:18858089
Homo sapiens (Hsa) Hs4502297 GI:4502297 P30049
Saccharomyces cerevisiae (Sce) YDL004w
(S000002162)
GI:6320200 Q12165
Schizosaccharomyces pombe (Spo) SPBC13E7.04 GI:19113051 Q9P6R6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000275 mitochondrial proton-transporting ATP synthase
complex, catalytic core F(1)
C
IDA
AthAt5g47030
ISS
DmeFBgn0028342
GO:0005739 mitochondrion C
IDA
AthAt5g47030
SceS000002162
SpoSPBC13E7.04
GO:0005753 mitochondrial proton-transporting ATP synthase
complex
C
ISS
AthAt5g47030
GO:0005756 mitochondrial proton-transporting ATP synthase,
central stalk
C
IDA
SceS000002162
IMP
SceS000002162
IPI
SceS000002162
ISS
SceS000002162
SpoSPBC13E7.04
GO:0005811 lipid particle C
IDA
DmeFBgn0028342
GO:0045261 proton-transporting ATP synthase complex,
catalytic core F(1)
C
IDA
SceS000002162
GO:0008270 zinc ion binding F
IDA
AthAt5g47030
GO:0008553 hydrogen-exporting ATPase activity,
phosphorylative mechanism
F
ISS
DmeFBgn0028342
GO:0016887 ATPase activity F
IDA
SceS000002162
GO:0046933 hydrogen ion transporting ATP synthase activity,
rotational mechanism
F
IDA
SceS000002162
IMP
SceS000002162
IPI
SceS000002162
ISS
AthAt5g47030
SceS000002162
SpoSPBC13E7.04
GO:0046961 proton-transporting ATPase activity, rotational
mechanism
F
ISS
SpoSPBC13E7.04
GO:0000003 reproduction P
IMP
CelWBGene00019061
GO:0002119 nematode larval development P
IMP
CelWBGene00019061
GO:0006793 phosphorus metabolic process P
RCA
SceS000002162
GO:0006811 ion transport P
RCA
SceS000002162
GO:0009117 nucleotide metabolic process P
RCA
SceS000002162
GO:0009651 response to salt stress P
IEP
AthAt5g47030
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00019061
GO:0015986 ATP synthesis coupled proton transport P
IMP
SceS000002162
IPI
SceS000002162
ISS
SceS000002162
GO:0015992 proton transport P
ISS
DmeFBgn0028342
GO:0040007 growth P
IMP
CelWBGene00019061
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00019061
GO:0042776 mitochondrial ATP synthesis coupled proton
transport
P
ISS
SpoSPBC13E7.04
GO:0055114 oxidation reduction P
RCA
SceS000002162

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
37514

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ATP5D GI:50345991
Pan troglodytes (Ptr) ATP5D GI:114674401
Canis familiaris (Cfa) ATP5D GI:57101494
Mus musculus (Mmu) Atp5d
(MGI:1913293)
GI:21536220 Q4FK74
Rattus norvegicus (Rno) Atp5d
(RGD:621372)
GI:20806153
Drosophila melanogaster (Dme) l(1)G0230
(FBgn0028342)
GI:18858089
Anopheles gambiae (Aga) AgaP_AGAP007841 GI:158297424
Caenorhabditis elegans (Cel) F58F12.1
(CE01976;
WBGene00019061)
GI:17534525 Q09544
Schizosaccharomyces pombe (Spo) atp16
(SPBC13E7.04)
GI:19113051 Q9P6R6
Saccharomyces cerevisiae (Sce) ATP16
(S000002162)
GI:6320200 Q12165
Kluyveromyces lactis (Kla) ATPD_KLULA GI:50311439
Eremothecium gossypii (Ego) AGOS_AEL008W GI:45190599
Magnaporthe grisea (Mgr) MGG_05742 GI:145615661
Neurospora crassa (Ncr) NCU00385.1 GI:32403716
Arabidopsis thaliana (Ath) AT5G47030 GI:15237998
Oryza sativa (Osa) Os07g0495200 GI:115472191


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000275 mitochondrial proton-transporting ATP synthase
complex, catalytic core F(1)
C
IDA
AthAt5g47030
ISO
MmuMGI:1913293
ISS
DmeFBgn0028342
NAS
HsaATP5D
GO:0005739 mitochondrion C
IDA
AthAt5g47030
MmuMGI:1913293
SceS000002162
SpoSPBC13E7.04
NAS
HsaATP5D
GO:0005740 mitochondrial envelope C
ISO
MmuMGI:1913293
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1913293
ISO
MmuMGI:1913293
ISS
HsaATP5D
GO:0005753 mitochondrial proton-transporting ATP synthase
complex
C
IDA
HsaATP5D
ISS
AthAt5g47030
NAS
HsaATP5D
GO:0005756 mitochondrial proton-transporting ATP synthase,
central stalk
C
IDA
SceS000002162
IMP
SceS000002162
IPI
SceS000002162
ISS
SceS000002162
SpoSPBC13E7.04
GO:0005759 mitochondrial matrix C
EXP
HsaATP5D
GO:0005811 lipid particle C
IDA
DmeFBgn0028342
GO:0045259 proton-transporting ATP synthase
complex
C
ISO
MmuMGI:1913293
GO:0045261 proton-transporting ATP synthase complex,
catalytic core F(1)
C
IDA
SceS000002162
ISO
MmuMGI:1913293
GO:0005215 transporter activity F
NAS
HsaATP5D
GO:0005524 ATP binding F
NAS
HsaATP5D
GO:0008270 zinc ion binding F
IDA
AthAt5g47030
GO:0008553 hydrogen-exporting ATPase activity,
phosphorylative mechanism
F
ISS
DmeFBgn0028342
GO:0015078 hydrogen ion transmembrane transporter
activity
F
ISO
MmuMGI:1913293
GO:0016887 ATPase activity F
IDA
HsaATP5D
SceS000002162
ISO
MmuMGI:1913293
GO:0022857 transmembrane transporter activity F
IC
HsaATP5D
GO:0032403 protein complex binding F
ISO
MmuMGI:1913293
GO:0043531 ADP binding F
NAS
HsaATP5D
GO:0046933 hydrogen ion transporting ATP synthase activity,
rotational mechanism
F
IDA
SceS000002162
IMP
SceS000002162
IPI
SceS000002162
ISS
AthAt5g47030
SceS000002162
SpoSPBC13E7.04
GO:0046961 proton-transporting ATPase activity, rotational
mechanism
F
ISS
SpoSPBC13E7.04
GO:0000003 reproduction P
IMP
CelWBGene00019061
GO:0002119 nematode larval development P
IMP
CelWBGene00019061
GO:0006119 oxidative phosphorylation P
NAS
HsaATP5D
GO:0006172 ADP biosynthetic process P
ISO
MmuMGI:1913293
GO:0006200 ATP catabolic process P
ISO
MmuMGI:1913293
NAS
HsaATP5D
GO:0006754 ATP biosynthetic process P
NAS
HsaATP5D
GO:0006793 phosphorus metabolic process P
RCA
SceS000002162
GO:0006811 ion transport P
RCA
SceS000002162
GO:0009117 nucleotide metabolic process P
RCA
SceS000002162
GO:0009651 response to salt stress P
IEP
AthAt5g47030
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00019061
GO:0015986 ATP synthesis coupled proton transport P
IMP
SceS000002162
IPI
SceS000002162
ISS
SceS000002162
GO:0015992 proton transport P
ISO
MmuMGI:1913293
ISS
DmeFBgn0028342
GO:0034220 ion transmembrane transport P
ISO
MmuMGI:1913293
GO:0040007 growth P
IMP
CelWBGene00019061
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00019061
GO:0042776 mitochondrial ATP synthesis coupled proton
transport
P
IC
HsaATP5D
ISS
SpoSPBC13E7.04
NAS
HsaATP5D
GO:0046034 ATP metabolic process P
ISO
MmuMGI:1913293
GO:0046688 response to copper ion P
NAS
HsaATP5D
GO:0055114 oxidation reduction P
RCA
SceS000002162

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1131

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga9764 ENSANGP00000018565
Ashbya gossypii (Ago) ago2498 AEL008W
Arabidopsis thaliana (Ath) ath26573 At5g47030.1
Caenorhabditis elegans (Cel) cel10923 F58F12.1
(CE01976;
WBGene00019061)
Candida glabrata (Cgl) cgl609 CAGL0C04455g
Cryptococcus neoformans (Cne) cne4602 186.m03443
Dictyostelium discoideum (Ddi) ddi897 DDB0216607
Debaryomyces hansenii (Dha) dha646 DEHA0A14432g
Drosophila melanogaster (Dme) dme17228 CG2968-PA
(FBgn0028342)
Danio rerio (Dre) dre14621 ENSDARP00000022528
(atp5d)
Q1LVG7
Danio rerio (Dre) dre14620 ENSDARP00000049136
Escherichia coli (Eco) eco3610 16131599
Takifugu rubripes (Fru) fru1744 SINFRUP00000163451
Homo sapiens (Hsa) hsa15206 ENSP00000215375
(ATP5D)
P30049
Kluyveromyces lactis (Kla) kla4744 KLLA0F14773g
Mus musculus (Mmu) mmu2489 ENSMUSP00000003156
(MGI:1913293)
Q9D3D9
Neurospora crassa (Ncr) ncr371 NCU00385.2
Oryza sativa (Osa) osa4837 2123.m00178
Oryza sativa (Osa) osa58685 6274.m00088
Oryza sativa (Osa) osa64078 6791.m00107
Plasmodium falciparum (Pfa) pfa932 PF11_0485
Rattus norvegicus (Rno) rno26283 ENSRNOP00000020670
(RGD:621372)
P35434
Saccharomyces cerevisiae (Sce) sce771 YDL004W
(S000002162)
Schizosaccharomyces pombe (Spo) spo1783 SPBC13E7.04 Q9P6R6
Yarrowia lipolytica (Yli) yli3629 YALI0D22022g