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Search term: YDL043C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PRP11
SGD link S000002201
Alternative ID YDL043C
Description Subunit of the SF3a splicing factor complex, required for spliceosome assembly
Synonyms YDL043C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0227 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Splicing factor 3a, subunit 2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g32600 GI:7488346
Caenorhabditis elegans (Cel) CE28910
(WBGene00008683)		 GI:17539744 Q19335
Drosophila melanogaster (Dme) 7294535 GI:7294535
Homo sapiens (Hsa) Hs21361376 GI:20141793 Q15428
Homo sapiens (Hsa) HsM6005866 GI:6005866
Saccharomyces cerevisiae (Sce) YDL043c
(S000002201)		 GI:6320161 Q07350
Schizosaccharomyces pombe (Spo) SPBC21C3.05 GI:19113377 Q9P7L8
Encephalitozoon cuniculi (Ecu) ECU03g0480 GI:19173008 Q8SSB4
Arabidopsis thaliana (Ath) At2g32600 GI:7488346
Caenorhabditis elegans (Cel) CE28910
(WBGene00008683)		 GI:17539744 Q19335
Drosophila melanogaster (Dme) 7294535 GI:7294535
Homo sapiens (Hsa) Hs21361376 GI:20141793 Q15428
Homo sapiens (Hsa) HsM6005866 GI:6005866
Saccharomyces cerevisiae (Sce) YDL043c
(S000002201)		 GI:6320161 Q07350
Schizosaccharomyces pombe (Spo) SPBC21C3.05 GI:19113377 Q9P7L8
Encephalitozoon cuniculi (Ecu) ECU03g0480 GI:19173008 Q8SSB4
Arabidopsis thaliana (Ath) At2g32600 GI:7488346
Caenorhabditis elegans (Cel) CE28910
(WBGene00008683)		 GI:17539744 Q19335
Drosophila melanogaster (Dme) 7294535 GI:7294535
Homo sapiens (Hsa) Hs21361376 GI:20141793 Q15428
Homo sapiens (Hsa) HsM6005866 GI:6005866
Saccharomyces cerevisiae (Sce) YDL043c
(S000002201)		 GI:6320161 Q07350
Schizosaccharomyces pombe (Spo) SPBC21C3.05 GI:19113377 Q9P7L8
Encephalitozoon cuniculi (Ecu) ECU03g0480 GI:19173008 Q8SSB4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.05
GO:0005681 spliceosomal complex C
ISS
AthAt2g32600
NAS
SpoSPBC21C3.05
GO:0005686 U2 snRNP C
ISS
SpoSPBC21C3.05
TAS
SceS000002201
S000002201
GO:0005829 cytosol C
IDA
SpoSPBC21C3.05
GO:0071004 U2-type prespliceosome C
IDA
SceS000002201
GO:0003723 RNA binding F
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0000003 reproduction P
IMP
CelWBGene00008683
GO:0000245 spliceosome assembly P
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00008683
GO:0002119 nematode larval development P
IMP
CelWBGene00008683
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008683
GO:0008150 biological_process P
ND
AthAt2g32600
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008683
GO:0016071 mRNA metabolic process P
RCA
SceS000002201
GO:0040007 growth P
IMP
CelWBGene00008683
GO:0040011 locomotion P
IMP
CelWBGene00008683
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00008683

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38623

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PRP11
(S000002201)		 GI:6320161 Q07350
Kluyveromyces lactis (Kla) KLLA0F22473g GI:50312105
Eremothecium gossypii (Ego) AGOS_AEL014C GI:45190593


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005686 U2 snRNP C
TAS
SceS000002201
S000002201
GO:0071004 U2-type prespliceosome C
IDA
SceS000002201
GO:0003723 RNA binding F
IDA
SceS000002201
GO:0000245 spliceosome assembly P
IDA
SceS000002201
GO:0016071 mRNA metabolic process P
RCA
SceS000002201

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2234

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8031 ENSANGP00000003103
Ashbya gossypii (Ago) ago2492 AEL014C
Arabidopsis thaliana (Ath) ath10274 At2g32600.1
Caenorhabditis elegans (Cel) cel5987 F11A10.2
(CE28910;
WBGene00008683)
Candida glabrata (Cgl) cgl3582 CAGL0K01441g
Cryptococcus neoformans (Cne) cne832 163.m06159
Dictyostelium discoideum (Ddi) ddi10880 DDB0192174
Debaryomyces hansenii (Dha) dha3870 DEHA0E14234g
Drosophila melanogaster (Dme) dme9295 CG10754-PA
(FBgn0036314)
Danio rerio (Dre) dre13940 ENSDARP00000003884
(sf3a2)		 Q7ZVD4
Encephalitozoon cuniculi (Ecu) ecu415 19173008
Takifugu rubripes (Fru) fru32518 SINFRUP00000154077
Gallus gallus (Gga) gga14020 ENSGALP00000001205
(AMH)
Homo sapiens (Hsa) hsa15267 ENSP00000221494
(SF3A2)		 Q05DF2
Kluyveromyces lactis (Kla) kla5084 KLLA0F22473g
Mus musculus (Mmu) mmu2537 ENSMUSP00000020432
(MGI:104912)		 Q62203
Neurospora crassa (Ncr) ncr7105 NCU07299.2
Oryza sativa (Osa) osa62106 6667.m00119
Plasmodium falciparum (Pfa) pfa2933 PFF0970w
Rattus norvegicus (Rno) rno26232 ENSRNOP00000026202
(RGD:1308627)		 Q6AXT8
Saccharomyces cerevisiae (Sce) sce812 YDL043C
(S000002201)
Schizosaccharomyces pombe (Spo) spo251 SPBC21C3.05 Q9P7L8
Yarrowia lipolytica (Yli) yli3783 YALI0D25652g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.05
ISS
MmuMGI:104912
GO:0005681 spliceosomal complex C
ISS
AthAt2g32600
DmeFBgn0036314
PfaPFF0970w
NAS
SpoSPBC21C3.05
GO:0005686 U2 snRNP C
ISS
DmeFBgn0036314
SpoSPBC21C3.05
TAS
SceS000002201
S000002201
GO:0005829 cytosol C
IDA
SpoSPBC21C3.05
GO:0071004 U2-type prespliceosome C
IDA
SceS000002201
GO:0071011 precatalytic spliceosome C
IDA
DmeFBgn0036314
GO:0071013 catalytic step 2 spliceosome C
IDA
DmeFBgn0036314
GO:0003674 molecular_function F
ND
MmuMGI:104912
GO:0003723 RNA binding F
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0000003 reproduction P
IMP
CelWBGene00008683
GO:0000245 spliceosome assembly P
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0000375 RNA splicing, via transesterification
reactions		 P
TAS
MmuMGI:104912
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
DmeFBgn0036314
ISS
DmeFBgn0036314
TAS
MmuMGI:104912
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00008683
GO:0002119 nematode larval development P
IMP
CelWBGene00008683
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008683
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0036314
GO:0008150 biological_process P
ND
AthAt2g32600
GO:0008380 RNA splicing P
ISS
PfaPFF0970w
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008683
GO:0016071 mRNA metabolic process P
RCA
SceS000002201
GO:0040007 growth P
IMP
CelWBGene00008683
GO:0040011 locomotion P
IMP
CelWBGene00008683
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00008683

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC21C3.05
(Q9P7L8)		 YDL043C
(S000002201)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC21C3.05
GO:0005681 spliceosomal complex C
NAS
SpoSPBC21C3.05
GO:0005686 U2 snRNP C
ISS
SpoSPBC21C3.05
TAS
SceS000002201
S000002201
GO:0005829 cytosol C
IDA
SpoSPBC21C3.05
GO:0071004 U2-type prespliceosome C
IDA
SceS000002201
GO:0003723 RNA binding F
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0000245 spliceosome assembly P
IDA
SceS000002201
ISS
SpoSPBC21C3.05
GO:0016071 mRNA metabolic process P
RCA
SceS000002201

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GO info in one table:

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