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Search term: YDL070W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BDF2
SGD link S000002228
Alternative ID YDL070W
Description Protein involved in transcription initiation at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf1p
Synonyms YDL070W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1474 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g06230 GI:15221424
Arabidopsis thaliana (Ath) At1g17790 GI:18394534
Arabidopsis thaliana (Ath) At1g58025 GI:15217830
Arabidopsis thaliana (Ath) At1g73150 GI:15219397
Arabidopsis thaliana (Ath) At2g34900 GI:15226857
Arabidopsis thaliana (Ath) At3g01770 GI:6016737
Arabidopsis thaliana (Ath) At3g27260 GI:15232127
Arabidopsis thaliana (Ath) At3g52280 GI:15231174
Arabidopsis thaliana (Ath) At5g10550 GI:15238195
Arabidopsis thaliana (Ath) At5g14270 GI:11358472
Arabidopsis thaliana (Ath) At5g46550 GI:15237461
Arabidopsis thaliana (Ath) At5g63330 GI:15242727
Arabidopsis thaliana (Ath) At5g65630 GI:15239091
Caenorhabditis elegans (Cel) CE05993 GI:17568249
Caenorhabditis elegans (Cel) CE18761 GI:17568247 Q20948
Caenorhabditis elegans (Cel) CE19384
(WBGene00017423)		 GI:17551634 O76561
Caenorhabditis elegans (Cel) CE25214
(WBGene00022473)		 GI:17510957
Drosophila melanogaster (Dme) 7290870 GI:7290870
Drosophila melanogaster (Dme) 7291557 GI:7291557
Drosophila melanogaster (Dme) 7301065 GI:7301065 Q9VCG6
Drosophila melanogaster (Dme) 7302505 GI:20130147
Homo sapiens (Hsa) Hs11067749
(BRD3)		 GI:11067749 Q15059
Homo sapiens (Hsa) Hs19718731
(BRD4)		 GI:19718731 Q96HN0
Homo sapiens (Hsa) Hs4502453 GI:4502453
Homo sapiens (Hsa) Hs4826806 GI:4826806 Q9UNM9
Homo sapiens (Hsa) Hs7657218 GI:7657218 Q96HN0
Saccharomyces cerevisiae (Sce) YDL070w
(S000002228)		 GI:6320132 Q07442
Saccharomyces cerevisiae (Sce) YLR399c
(S000004391)		 GI:6323431 P35817
Schizosaccharomyces pombe (Spo) SPAC631.02 GI:19114532 Q9HGP4
Encephalitozoon cuniculi (Ecu) ECU08g1640 GI:19173489 Q8SR93


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
IDA
SceS000004391
ISS
SpoSPAC631.02
GO:0005575 cellular_component C
ND
AthAt1g06230
At1g58025
At5g10550
At5g65630
At3g01770
GO:0005634 nucleus C
IDA
AthAt2g34900
At3g52280
HsaBRD4
SceS000004391
SpoSPAC631.02
ISS
SpoSPAC631.02
NAS
HsaBRD3
TAS
SceS000002228
GO:0005737 cytoplasm C
IDA
HsaBRD4
GO:0009507 chloroplast C
IDA
AthAt3g27260
GO:0003674 molecular_function F
ND
HsaBRD3
SpoSPAC631.02
GO:0003677 DNA binding F
ISS
AthAt5g14270
At5g65630
At1g58025
At3g27260
At5g10550
At1g73150
At2g34900
At1g17790
At1g06230
At5g46550
At3g52280
At3g01770
GO:0004402 histone acetyltransferase activity F
IDA
AthAt3g52280
GO:0005515 protein binding F
IPI
HsaBRD3
BRD4
GO:0030528 transcription regulator activity F
IMP
SceS000004391
ISS
SceS000004391
GO:0042393 histone binding F
IDA
SceS000002228
IPI
AthAt1g73150
GO:0070577 histone acetyl-lysine binding F
IDA
SceS000002228
S000004391
GO:0000003 reproduction P
IMP
CelWBGene00022473
WBGene00017423
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00022473
GO:0002119 nematode larval development P
IMP
CelWBGene00022473
WBGene00017423
GO:0006281 DNA repair P
IMP
SceS000004391
GO:0006338 chromatin remodeling P
IDA
AthAt3g52280
IPI
SceS000004391
ISS
SpoSPAC631.02
GO:0007049 cell cycle P
IMP
AthAt1g06230
GO:0007126 meiosis P
IMP
SceS000004391
GO:0008150 biological_process P
ND
AthAt1g58025
At1g17790
At3g01770
At3g27260
HsaBRD3
SceS000002228
GO:0009294 DNA mediated transformation P
IMP
AthAt5g65630
At5g10550
At1g06230
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00022473
WBGene00017423
GO:0010030 positive regulation of seed germination P
IMP
AthAt2g34900
GO:0030437 ascospore formation P
IMP
SceS000004391
GO:0040007 growth P
IMP
CelWBGene00022473
WBGene00017423
GO:0040011 locomotion P
IMP
CelWBGene00017423
WBGene00022473
GO:0043044 ATP-dependent chromatin remodeling P
RCA
SceS000004391
GO:0048364 root development P
IMP
AthAt1g06230

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_10789

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Gallus gallus (Gga) gga22506 ENSGALP00000009694
(LOC770567)
Gallus gallus (Gga) gga22507 ENSGALP00000009695
Gallus gallus (Gga) gga22508 ENSGALP00000009696
Homo sapiens (Hsa) hsa1493 ENSP00000260512
(BRDT)		 Q58F21-2
Homo sapiens (Hsa) hsa1492 ENSP00000354568
(BRDT)		 Q58F21-1
Homo sapiens (Hsa) hsa1491 ENSP00000355181
Mus musculus (Mmu) mmu20535 ENSMUSP00000031215
(MGI:1891374)		 Q91Y44-1
Mus musculus (Mmu) mmu20536 ENSMUSP00000069315
Rattus norvegicus (Rno) rno9919 ENSRNOP00000002842
(RGD:1306678)
Saccharomyces cerevisiae (Sce) sce840 YDL070W
(S000002228)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
MmuMGI:1891374
TAS
SceS000002228
GO:0042393 histone binding F
IDA
MmuMGI:1891374
SceS000002228
GO:0070577 histone acetyl-lysine binding F
IDA
SceS000002228
GO:0006338 chromatin remodeling P
IDA
MmuMGI:1891374
GO:0008150 biological_process P
ND
SceS000002228

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1450.02
(Q9Y7N0)		 YDL070W
(S000002228)
SPAC631.02
(Q9HGP4)		 YDL070W
(S000002228)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000790 nuclear chromatin C
ISS
SpoSPAC631.02
GO:0000812 Swr1 complex C
IDA
SpoSPCC1450.02
GO:0005634 nucleus C
IDA
SpoSPCC1450.02
SPAC631.02
ISS
SpoSPAC631.02
TAS
SceS000002228
GO:0003674 molecular_function F
ND
SpoSPCC1450.02
SPAC631.02
GO:0042393 histone binding F
IDA
SceS000002228
GO:0070577 histone acetyl-lysine binding F
IDA
SceS000002228
GO:0006338 chromatin remodeling P
IPI
SpoSPCC1450.02
ISS
SpoSPAC631.02
GO:0008150 biological_process P
ND
SceS000002228
GO:0043486 histone exchange P
IPI
SpoSPCC1450.02

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