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Search term: YDL083C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPS16B
SGD link S000002241
Alternative ID YDL083C
Description Protein component of the small (40S) ribosomal subunit; identical to Rps16Ap and has similarity to E. coli S9 and rat S16 ribosomal proteins
Synonyms YDL083C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1753 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S16

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g09990 GI:15226676
Arabidopsis thaliana (Ath) At3g04230 GI:15229252
Arabidopsis thaliana (Ath) At5g18380 GI:15238809
Caenorhabditis elegans (Cel) CE12918
(WBGene00004485)
GI:17563670 Q22054
Drosophila melanogaster (Dme) 7291436
(FBgn0034743)
GI:19922746
Homo sapiens (Hsa) Hs18549572 GI:18549572
Homo sapiens (Hsa) Hs18552340 GI:18552340
Homo sapiens (Hsa) Hs18591367 GI:18591367
Homo sapiens (Hsa) Hs20544263 GI:20544263
Homo sapiens (Hsa) Hs20562294 GI:20562294
Homo sapiens (Hsa) Hs22064413 GI:22064413
Homo sapiens (Hsa) Hs4506691
(RPS16)
GI:4506691 P62249
Saccharomyces cerevisiae (Sce) YDL083c
(S000002241)
GI:6320120 P40213
Saccharomyces cerevisiae (Sce) YMR143w
(S000004751)
GI:6320120 P40213
Schizosaccharomyces pombe (Spo) SPAC664.04c GI:19114364 O60144
Schizosaccharomyces pombe (Spo) SPBC18H10.14 GI:19112530 O60144
Encephalitozoon cuniculi (Ecu) ECU03g0310 GI:19172992 Q8SSC2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g09990
GO:0005730 nucleolus C
IDA
AthAt3g04230
GO:0005811 lipid particle C
IDA
DmeFBgn0034743
GO:0005829 cytosol C
EXP
HsaRPS16
IDA
SpoSPAC664.04c
GO:0009507 chloroplast C
IDA
AthAt5g18380
At3g04230
At2g09990
GO:0015935 small ribosomal subunit C
IDA
HsaRPS16
GO:0016020 membrane C
IDA
AthAt2g09990
At3g04230
GO:0022626 cytosolic ribosome C
IDA
AthAt3g04230
At2g09990
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g04230
At2g09990
At5g18380
HsaRPS16
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
SpoSPAC664.04c
SPBC18H10.14
NAS
HsaRPS16
SceS000002241
S000004751
GO:0030686 90S preribosome C
IDA
SceS000004751
GO:0003723 RNA binding F
IDA
HsaRPS16
GO:0003735 structural constituent of ribosome F
ISS
AthAt5g18380
At3g04230
At2g09990
DmeFBgn0034743
SpoSPAC664.04c
SPBC18H10.14
NAS
SceS000002241
S000004751
GO:0005515 protein binding F
IPI
HsaRPS16
GO:0000003 reproduction P
IMP
CelWBGene00004485
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0034743
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IGI
SceS000002241
S000004751
GO:0002119 nematode larval development P
IMP
CelWBGene00004485
GO:0006364 rRNA processing P
IMP
HsaRPS16
GO:0006412 translation P
IC
HsaRPS16
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
SpoSPAC664.04c
SPBC18H10.14
NAS
HsaRPS16
SceS000002241
S000004751
GO:0006414 translational elongation P
EXP
HsaRPS16
GO:0006417 regulation of translation P
RCA
SceS000002241
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0034743
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004485
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004485
GO:0040007 growth P
IMP
CelWBGene00004485
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC664.04c
SPBC18H10.14
GO:0042274 ribosomal small subunit biogenesis P
IMP
HsaRPS16
RCA
SceS000004751

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
794

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPS16 GI:4506691 P62249
Pan troglodytes (Ptr) RPS16 GI:55649139
Canis familiaris (Cfa) RPS16 GI:73948356
Mus musculus (Mmu) Rps16
(MGI:98118)
GI:7305445 P14131
Rattus norvegicus (Rno) Rps16
(RGD:621031)
GI:109458449
Rattus norvegicus (Rno) RGD1559743 GI:109484072
Rattus norvegicus (Rno) RGD1561137 GI:109468120
Gallus gallus (Gga) RPS16 GI:50728374
Drosophila melanogaster (Dme) RpS16
(FBgn0034743)
GI:19922746
Anopheles gambiae (Aga) AgaP_AGAP011424 GI:58390666
Caenorhabditis elegans (Cel) rps-16
(CE12918;
WBGene00004485)
GI:17563670 Q22054
Schizosaccharomyces pombe (Spo) rps16 GI:19114364
Schizosaccharomyces pombe (Spo) rps16-1
(SPBC18H10.14)
GI:19112530 O60144
Saccharomyces cerevisiae (Sce) RPS16A
(S000004751)
GI:9755341
Saccharomyces cerevisiae (Sce) RPS16B
(S000002241)
GI:6320120 P40213
Kluyveromyces lactis (Kla) KLLA0E22077g GI:50309865
Eremothecium gossypii (Ego) AGOS_ADR258W GI:45188131
Magnaporthe grisea (Mgr) MGG_12892 GI:145601971
Neurospora crassa (Ncr) NCU08620.1 GI:32418532
Arabidopsis thaliana (Ath) AT5G18380 GI:15238809
Arabidopsis thaliana (Ath) AT2G09990 GI:15226676
Arabidopsis thaliana (Ath) AT3G04230 GI:15229252
Oryza sativa (Osa) Os12g0124200 GI:115487104
Oryza sativa (Osa) Os11g0127900 GI:115483941
Plasmodium falciparum (Pfa) PF08_0076 GI:124512506


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g09990
GO:0005730 nucleolus C
IDA
AthAt3g04230
GO:0005811 lipid particle C
IDA
DmeFBgn0034743
GO:0005829 cytosol C
EXP
HsaRPS16
GO:0009507 chloroplast C
IDA
AthAt5g18380
At3g04230
At2g09990
GO:0015935 small ribosomal subunit C
IDA
HsaRPS16
GO:0016020 membrane C
IDA
AthAt2g09990
At3g04230
GO:0022626 cytosolic ribosome C
IDA
AthAt3g04230
At2g09990
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g04230
At2g09990
At5g18380
HsaRPS16
ISO
MmuMGI:98118
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
PfaPF08_0076
SpoSPBC18H10.14
NAS
HsaRPS16
SceS000002241
S000004751
GO:0030686 90S preribosome C
IDA
SceS000004751
GO:0003723 RNA binding F
IDA
HsaRPS16
GO:0003735 structural constituent of ribosome F
ISS
AthAt5g18380
At3g04230
At2g09990
DmeFBgn0034743
SpoSPBC18H10.14
NAS
SceS000002241
S000004751
GO:0005515 protein binding F
IPI
HsaRPS16
GO:0000003 reproduction P
IMP
CelWBGene00004485
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0034743
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IGI
SceS000002241
S000004751
GO:0002119 nematode larval development P
IMP
CelWBGene00004485
GO:0006364 rRNA processing P
IMP
HsaRPS16
GO:0006412 translation P
IC
HsaRPS16
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
SpoSPBC18H10.14
NAS
HsaRPS16
SceS000002241
S000004751
GO:0006414 translational elongation P
EXP
HsaRPS16
GO:0006417 regulation of translation P
RCA
SceS000002241
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0034743
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004485
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004485
GO:0040007 growth P
IMP
CelWBGene00004485
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC18H10.14
GO:0042274 ribosomal small subunit biogenesis P
IMP
HsaRPS16
RCA
SceS000004751

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1200

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga8514 ENSANGP00000023979
Ashbya gossypii (Ago) ago1999 ADR258W
Arabidopsis thaliana (Ath) ath8127 At2g09990.1
Arabidopsis thaliana (Ath) ath12459 At3g04230.1
Arabidopsis thaliana (Ath) ath24088 At5g18380.1
Caenorhabditis elegans (Cel) cel14190 T01C3.6
(CE12918;
WBGene00004485)
Candida glabrata (Cgl) cgl2559 CAGL0I00792g
Cryptococcus neoformans (Cne) cne4825 186.m03701
Dictyostelium discoideum (Ddi) ddi12911 DDB0231057
Debaryomyces hansenii (Dha) dha2708 DEHA0D09328g
Drosophila melanogaster (Dme) dme6555 CG4046-PA
(FBgn0034743)
Encephalitozoon cuniculi (Ecu) ecu399 19172992
Gallus gallus (Gga) gga550 ENSGALP00000016800
(RPS16)
Homo sapiens (Hsa) hsa16363 ENSP00000251453
(RPS16)
P62249
Kluyveromyces lactis (Kla) kla3945 KLLA0E22077g
Mus musculus (Mmu) mmu23501 ENSMUSP00000047384
(MGI:3704259)
P14131
Mus musculus (Mmu) mmu20989 ENSMUSP00000076000
(MGI:3704259)
Q5CZY9
Neurospora crassa (Ncr) ncr8401 NCU08620.2
Oryza sativa (Osa) osa60212 6556.m00165
Oryza sativa (Osa) osa80381 7506.m00139
Oryza sativa (Osa) osa80730 8108.m00139
Plasmodium falciparum (Pfa) pfa2170 PF08_0076
Rattus norvegicus (Rno) rno1402 ENSRNOP00000026576
(RGD:621031)
P62250
Saccharomyces cerevisiae (Sce) sce853 YDL083C
(S000002241)
Saccharomyces cerevisiae (Sce) sce4902 YMR143W
(S000004751)
Schizosaccharomyces pombe (Spo) spo3211 SPAC664.04c O60144
Schizosaccharomyces pombe (Spo) spo1949 SPBC18H10.14 O60144
Yarrowia lipolytica (Yli) yli1270 YALI0B12848g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005618 cell wall C
IDA
AthAt2g09990
GO:0005730 nucleolus C
IDA
AthAt3g04230
GO:0005811 lipid particle C
IDA
DmeFBgn0034743
GO:0005829 cytosol C
IDA
SpoSPAC664.04c
GO:0009507 chloroplast C
IDA
AthAt5g18380
At3g04230
At2g09990
GO:0016020 membrane C
IDA
AthAt2g09990
At3g04230
GO:0022626 cytosolic ribosome C
IDA
AthAt3g04230
At2g09990
GO:0022627 cytosolic small ribosomal subunit C
IDA
AthAt3g04230
At2g09990
At5g18380
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
PfaPF08_0076
SpoSPAC664.04c
SPBC18H10.14
NAS
SceS000002241
S000004751
GO:0030686 90S preribosome C
IDA
SceS000004751
GO:0003735 structural constituent of ribosome F
ISS
AthAt5g18380
At3g04230
At2g09990
DmeFBgn0034743
SpoSPAC664.04c
SPBC18H10.14
NAS
SceS000002241
S000004751
GO:0000003 reproduction P
IMP
CelWBGene00004485
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0034743
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IGI
SceS000002241
S000004751
GO:0002119 nematode larval development P
IMP
CelWBGene00004485
GO:0006412 translation P
ISS
AthAt3g04230
At5g18380
At2g09990
DmeFBgn0034743
SpoSPAC664.04c
SPBC18H10.14
NAS
SceS000002241
S000004751
GO:0006417 regulation of translation P
RCA
SceS000002241
GO:0007052 mitotic spindle organization P
IMP
DmeFBgn0034743
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004485
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00004485
GO:0040007 growth P
IMP
CelWBGene00004485
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC664.04c
SPBC18H10.14
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000004751

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC664.04c
(O60144)
YDL083C
(S000002241)
SPBC18H10.14
(O60144)
YDL083C
(S000002241)