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Search term: YDL102W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name POL3
SGD link S000002260
Alternative ID YDL102W
Description Catalytic subunit of DNA polymerase delta; required for chromosomal DNA replication during mitosis and meiosis, intragenic recombination, repair of double strand DNA breaks, and DNA replication during nucleotide excision repair (NER)
Synonyms YDL102W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0969 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING DNA polymerase delta, catalytic subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g49180_2 GI:15222065
Arabidopsis thaliana (Ath) At5g63960 GI:15237565
Caenorhabditis elegans (Cel) CE09308
(WBGene00008645)		 GI:17559488 P90829
Drosophila melanogaster (Dme) 7294203 GI:13124718
Homo sapiens (Hsa) Hs4505933 GI:4505933
Homo sapiens (Hsa) Hs17463480 GI:17463480
Saccharomyces cerevisiae (Sce) YDL102w
(S000002260)		 GI:6320101 P15436
Schizosaccharomyces pombe (Spo) SPBC336.04 GI:19112916 P30316
Encephalitozoon cuniculi (Ecu) ECU09g0430 GI:19173164
Arabidopsis thaliana (Ath) At1g49180_2 GI:15222065
Arabidopsis thaliana (Ath) At5g63960 GI:15237565
Caenorhabditis elegans (Cel) CE09308
(WBGene00008645)		 GI:17559488 P90829
Drosophila melanogaster (Dme) 7294203 GI:13124718
Homo sapiens (Hsa) Hs4505933 GI:4505933
Homo sapiens (Hsa) Hs17463480 GI:17463480
Saccharomyces cerevisiae (Sce) YDL102w
(S000002260)		 GI:6320101 P15436
Schizosaccharomyces pombe (Spo) SPBC336.04 GI:19112916 P30316
Encephalitozoon cuniculi (Ecu) ECU09g0430 GI:19173164


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g49180
GO:0005634 nucleus C
IDA
SpoSPBC336.04
GO:0005657 replication fork C
IDA
SceS000002260
GO:0043596 nuclear replication fork C
IC
SpoSPBC336.04
GO:0043625 delta DNA polymerase complex C
TAS
SceS000002260
SpoSPBC336.04
GO:0003887 DNA-directed DNA polymerase activity F
IDA
SceS000002260
IMP
SceS000002260
ISS
AthAt5g63960
TAS
SpoSPBC336.04
GO:0005515 protein binding F
IPI
SpoSPBC336.04
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
TAS
SceS000002260
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPBC336.04
GO:0016301 kinase activity F
ISS
AthAt1g49180
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPBC336.04
GO:0000910 cytokinesis P
IMP
CelWBGene00008645
GO:0002119 nematode larval development P
IMP
CelWBGene00008645
GO:0006260 DNA replication P
IMP
SceS000002260
RCA
SceS000002260
GO:0006272 leading strand elongation P
TAS
SceS000002260
GO:0006273 lagging strand elongation P
TAS
SceS000002260
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000002260
GO:0006281 DNA repair P
RCA
SceS000002260
GO:0006284 base-excision repair P
TAS
SceS000002260
GO:0006289 nucleotide-excision repair P
TAS
SceS000002260
GO:0006298 mismatch repair P
NAS
SceS000002260
GO:0006301 postreplication repair P
TAS
SceS000002260
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008645
GO:0006974 response to DNA damage stimulus P
RCA
SceS000002260
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPBC336.04
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008645
GO:0010972 negative regulation of G2/M transition of mitotic
cell cycle		 P
IMP
SpoSPBC336.04
GO:0035188 hatching P
IMP
CelWBGene00008645
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000002260
TAS
SpoSPBC336.04
GO:0045005 maintenance of fidelity involved in DNA-dependent
DNA replication		 P
IGI
SceS000002260
GO:0051301 cell division P
IMP
CelWBGene00008645

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2014

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) POLD1 GI:156616275
Canis familiaris (Cfa) POLD1 GI:73946992
Mus musculus (Mmu) Pold1
(MGI:97741)		 GI:31981551 P52431
Rattus norvegicus (Rno) Pold1
(RGD:621839)		 GI:11067381
Drosophila melanogaster (Dme) DNApol-delta GI:24664937
Caenorhabditis elegans (Cel) F10C2.4
(CE09308;
WBGene00008645)		 GI:17559488 P90829
Schizosaccharomyces pombe (Spo) cdc6
(SPBC336.04)		 GI:19112916 P30316
Saccharomyces cerevisiae (Sce) POL3
(S000002260)		 GI:6320101 P15436
Kluyveromyces lactis (Kla) KLLA0E01606g GI:50308039
Eremothecium gossypii (Ego) AGOS_AFL189W GI:45198332
Magnaporthe grisea (Mgr) MGG_08071 GI:39945902
Neurospora crassa (Ncr) NCU01192.1 GI:32412410
Arabidopsis thaliana (Ath) EMB2780 GI:186532719
Oryza sativa (Osa) Os11g0186400 GI:115484523
Plasmodium falciparum (Pfa) PF10_0165 GI:124802365


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaPOLD1
SpoSPBC336.04
GO:0005654 nucleoplasm C
EXP
HsaPOLD1
GO:0005657 replication fork C
IDA
SceS000002260
GO:0005875 microtubule associated complex C
IDA
DmeDNApol-delta
GO:0043596 nuclear replication fork C
IC
SpoSPBC336.04
GO:0043625 delta DNA polymerase complex C
IDA
DmeDNApol-delta
ISS
DmeDNApol-delta
PfaPF10_0165
TAS
SceS000002260
SpoSPBC336.04
GO:0003677 DNA binding F
IDA
HsaPOLD1
GO:0003682 chromatin binding F
IDA
HsaPOLD1
GO:0003887 DNA-directed DNA polymerase activity F
IDA
DmeDNApol-delta
SceS000002260
IMP
HsaPOLD1
SceS000002260
ISO
MmuMGI:97741
ISS
AthEMB2780
DmeDNApol-delta
PfaPF10_0165
NAS
DmeDNApol-delta
TAS
SpoSPBC336.04
GO:0005515 protein binding F
IPI
HsaPOLD1
SpoSPBC336.04
GO:0008296 3'-5'-exodeoxyribonuclease activity F
IDA
DmeDNApol-delta
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
ISS
PfaPF10_0165
NAS
DmeDNApol-delta
TAS
SceS000002260
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPBC336.04
IMP
MmuMGI:97741
GO:0000084 S phase of mitotic cell cycle P
IDA
HsaPOLD1
GO:0000731 DNA synthesis involved in DNA repair P
IDA
HsaPOLD1
IMP
HsaPOLD1
TAS
SpoSPBC336.04
GO:0000910 cytokinesis P
IMP
CelWBGene00008645
GO:0002119 nematode larval development P
IMP
CelWBGene00008645
GO:0006260 DNA replication P
IMP
HsaPOLD1
SceS000002260
RCA
SceS000002260
GO:0006261 DNA-dependent DNA replication P
ISO
MmuMGI:97741
GO:0006272 leading strand elongation P
NAS
DmeDNApol-delta
TAS
SceS000002260
GO:0006273 lagging strand elongation P
NAS
DmeDNApol-delta
TAS
SceS000002260
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000002260
GO:0006281 DNA repair P
RCA
SceS000002260
TAS
HsaPOLD1
GO:0006284 base-excision repair P
TAS
SceS000002260
GO:0006287 base-excision repair, gap-filling P
IMP
MmuMGI:97741
GO:0006289 nucleotide-excision repair P
TAS
SceS000002260
GO:0006297 nucleotide-excision repair, DNA gap
filling		 P
EXP
HsaPOLD1
GO:0006298 mismatch repair P
NAS
SceS000002260
GO:0006301 postreplication repair P
TAS
SceS000002260
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008645
GO:0006974 response to DNA damage stimulus P
IMP
DmeDNApol-delta
RCA
SceS000002260
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPBC336.04
GO:0009411 response to UV P
TAS
HsaPOLD1
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008645
GO:0010972 negative regulation of G2/M transition of mitotic
cell cycle		 P
IMP
SpoSPBC336.04
GO:0035188 hatching P
IMP
CelWBGene00008645
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000002260
TAS
SpoSPBC336.04
GO:0045004 DNA replication proofreading P
IMP
MmuMGI:97741
GO:0045005 maintenance of fidelity involved in DNA-dependent
DNA replication		 P
IGI
SceS000002260
GO:0051301 cell division P
IMP
CelWBGene00008645

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1344

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8871 ENSANGP00000014184
Ashbya gossypii (Ago) ago3006 AFL189W
Arabidopsis thaliana (Ath) ath28523 At5g63960.1
Caenorhabditis elegans (Cel) cel5884 F10C2.4
(CE09308;
WBGene00008645)
Candida glabrata (Cgl) cgl4401 CAGL0L07348g
Cryptococcus neoformans (Cne) cne3474 176.m02503
Dictyostelium discoideum (Ddi) ddi7943 DDB0186487
Debaryomyces hansenii (Dha) dha6751 DEHA0G23650g
Drosophila melanogaster (Dme) dme9698 CG5949-PA
(FBgn0012066)
Danio rerio (Dre) dre17086 ENSDARP00000005019
Danio rerio (Dre) dre17087 ENSDARP00000042970
Escherichia coli (Eco) eco61 16128054
Encephalitozoon cuniculi (Ecu) ecu1315 19173164
Takifugu rubripes (Fru) fru28305 SINFRUP00000158626
Takifugu rubripes (Fru) fru28306 SINFRUP00000167338
Takifugu rubripes (Fru) fru28307 SINFRUP00000168055
Homo sapiens (Hsa) hsa16884 ENSP00000262266
(POLD1)		 P28340
Kluyveromyces lactis (Kla) kla3019 KLLA0E01606g
Mus musculus (Mmu) mmu23891 ENSMUSP00000039776
(MGI:97741)		 Q3TFX6
Neurospora crassa (Ncr) ncr1155 NCU01192.2
Oryza sativa (Osa) osa41485 5259.m00141
Oryza sativa (Osa) osa42037 5272.m00150
Plasmodium falciparum (Pfa) pfa386 PF10_0165
Rattus norvegicus (Rno) rno1774 ENSRNOP00000026797
(RGD:621839)		 O54747
Saccharomyces cerevisiae (Sce) sce874 YDL102W
(S000002260)
Schizosaccharomyces pombe (Spo) spo2641 SPBC336.04 P30316
Yarrowia lipolytica (Yli) yli280 YALI0A08426g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC336.04
GO:0005657 replication fork C
IDA
SceS000002260
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0012066
GO:0043596 nuclear replication fork C
IC
SpoSPBC336.04
GO:0043625 delta DNA polymerase complex C
IDA
DmeFBgn0012066
ISS
DmeFBgn0012066
PfaPF10_0165
TAS
SceS000002260
SpoSPBC336.04
GO:0003887 DNA-directed DNA polymerase activity F
IDA
DmeFBgn0012066
SceS000002260
IMP
SceS000002260
ISO
MmuMGI:97741
ISS
AthAt5g63960
DmeFBgn0012066
PfaPF10_0165
NAS
DmeFBgn0012066
TAS
SpoSPBC336.04
GO:0005515 protein binding F
IPI
SpoSPBC336.04
GO:0008296 3'-5'-exodeoxyribonuclease activity F
IDA
DmeFBgn0012066
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
ISS
PfaPF10_0165
NAS
DmeFBgn0012066
TAS
SceS000002260
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPBC336.04
IMP
MmuMGI:97741
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPBC336.04
GO:0000910 cytokinesis P
IMP
CelWBGene00008645
GO:0002119 nematode larval development P
IMP
CelWBGene00008645
GO:0006260 DNA replication P
IMP
SceS000002260
RCA
SceS000002260
GO:0006261 DNA-dependent DNA replication P
ISO
MmuMGI:97741
GO:0006272 leading strand elongation P
NAS
DmeFBgn0012066
TAS
SceS000002260
GO:0006273 lagging strand elongation P
NAS
DmeFBgn0012066
TAS
SceS000002260
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000002260
GO:0006281 DNA repair P
RCA
SceS000002260
GO:0006284 base-excision repair P
TAS
SceS000002260
GO:0006287 base-excision repair, gap-filling P
IMP
MmuMGI:97741
GO:0006289 nucleotide-excision repair P
TAS
SceS000002260
GO:0006298 mismatch repair P
NAS
SceS000002260
GO:0006301 postreplication repair P
TAS
SceS000002260
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008645
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0012066
RCA
SceS000002260
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPBC336.04
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008645
GO:0010972 negative regulation of G2/M transition of mitotic
cell cycle		 P
IMP
SpoSPBC336.04
GO:0035188 hatching P
IMP
CelWBGene00008645
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000002260
TAS
SpoSPBC336.04
GO:0045004 DNA replication proofreading P
IMP
MmuMGI:97741
GO:0045005 maintenance of fidelity involved in DNA-dependent
DNA replication		 P
IGI
SceS000002260
GO:0051301 cell division P
IMP
CelWBGene00008645

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC336.04
(P30316)		 YDL102W
(S000002260)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC336.04
GO:0005657 replication fork C
IDA
SceS000002260
GO:0043596 nuclear replication fork C
IC
SpoSPBC336.04
GO:0043625 delta DNA polymerase complex C
TAS
SceS000002260
SpoSPBC336.04
GO:0003887 DNA-directed DNA polymerase activity F
IDA
SceS000002260
IMP
SceS000002260
TAS
SpoSPBC336.04
GO:0005515 protein binding F
IPI
SpoSPBC336.04
GO:0008310 single-stranded DNA specific 3'-5'
exodeoxyribonuclease activity		 F
TAS
SceS000002260
GO:0008408 3'-5' exonuclease activity F
IC
SpoSPBC336.04
GO:0000731 DNA synthesis involved in DNA repair P
TAS
SpoSPBC336.04
GO:0006260 DNA replication P
IMP
SceS000002260
RCA
SceS000002260
GO:0006272 leading strand elongation P
TAS
SceS000002260
GO:0006273 lagging strand elongation P
TAS
SceS000002260
GO:0006278 RNA-dependent DNA replication P
IDA
SceS000002260
GO:0006281 DNA repair P
RCA
SceS000002260
GO:0006284 base-excision repair P
TAS
SceS000002260
GO:0006289 nucleotide-excision repair P
TAS
SceS000002260
GO:0006298 mismatch repair P
NAS
SceS000002260
GO:0006301 postreplication repair P
TAS
SceS000002260
GO:0006974 response to DNA damage stimulus P
RCA
SceS000002260
GO:0007346 regulation of mitotic cell cycle P
IMP
SpoSPBC336.04
GO:0010972 negative regulation of G2/M transition of mitotic
cell cycle		 P
IMP
SpoSPBC336.04
GO:0043137 DNA replication, removal of RNA
primer		 P
IDA
SceS000002260
TAS
SpoSPBC336.04
GO:0045005 maintenance of fidelity involved in DNA-dependent
DNA replication		 P
IGI
SceS000002260

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