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Search term: YDL166C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name FAP7
SGD link S000002325
Alternative ID YDL166C
Description Essential NTPase required for small ribosome subunit synthesis, mediates processing of the 20S pre-rRNA at site D in the cytoplasm but associates only transiently with 43S preribosomes via Rps14p, may be the endonuclease for site D
Synonyms YDL166C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3347 ACDHYPE

KOGs classification KOGs description
METABOLISM Predicted nucleotide kinase/nuclear protein involved oxidative stress response

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g60340_1 GI:15239296
Caenorhabditis elegans (Cel) CE28286
(WBGene00008458)		 GI:17532769 Q09527
Drosophila melanogaster (Dme) 7303434
(FBgn0033754)		 GI:19922110
Homo sapiens (Hsa) Hs7706212 GI:7706212 Q16594
Saccharomyces cerevisiae (Sce) YDL166c
(S000002325)		 GI:6320035 Q12055
Schizosaccharomyces pombe (Spo) SPCC830.11c GI:19075981 Q9UU88
Encephalitozoon cuniculi (Ecu) ECU10g0960 GI:19074705 Q8SUE1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002325
SpoSPCC830.11c
ISS
SpoSPCC830.11c
GO:0005669 transcription factor TFIID complex C
ISS
SpoSPCC830.11c
GO:0005737 cytoplasm C
IMP
SceS000002325
GO:0005829 cytosol C
IDA
SpoSPCC830.11c
GO:0004017 adenylate kinase activity F
IDA
DmeFBgn0033754
GO:0016491 oxidoreductase activity F
ISS
AthAt5g60340
GO:0016887 ATPase activity F
NAS
SpoSPCC830.11c
GO:0017111 nucleoside-triphosphatase activity F
IMP
SceS000002325
ISS
SceS000002325
SpoSPCC830.11c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000002325
IPI
SceS000002325
GO:0002119 nematode larval development P
IMP
CelWBGene00008458
GO:0006200 ATP catabolic process P
NAS
SpoSPCC830.11c
GO:0008152 metabolic process P
ISS
AthAt5g60340
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002325
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPCC830.11c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000002325
GO:0040007 growth P
IMP
CelWBGene00008458
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008458
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000002325

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5540

Species Gene ID NCBI link UniProt link
Pan troglodytes (Ptr) TAF9 GI:114599906
Canis familiaris (Cfa) LOC478087 GI:73950125
Gallus gallus (Gga) RCJMB04_1f9 GI:71897001
Drosophila melanogaster (Dme) CG8816
(FBgn0033754)		 GI:19922110
Anopheles gambiae (Aga) AgaP_AGAP000272 GI:158289066
Caenorhabditis elegans (Cel) E02H1.6
(CE28286;
WBGene00008458)		 GI:17532769 Q09527
Schizosaccharomyces pombe (Spo) SPCC830.11c GI:19075981 Q9UU88
Saccharomyces cerevisiae (Sce) FAP7
(S000002325)		 GI:6320035 Q12055
Kluyveromyces lactis (Kla) KLLA0D12386g GI:50307271
Eremothecium gossypii (Ego) AGOS_ACL150W GI:45185538
Magnaporthe grisea (Mgr) MGG_06922 GI:39978075
Oryza sativa (Osa) Os07g0412400 GI:115471705
Plasmodium falciparum (Pfa) MAL1P2.35 GI:124505849


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002325
SpoSPCC830.11c
ISS
SpoSPCC830.11c
GO:0005669 transcription factor TFIID complex C
ISS
SpoSPCC830.11c
GO:0005737 cytoplasm C
IMP
SceS000002325
GO:0005829 cytosol C
IDA
SpoSPCC830.11c
GO:0004017 adenylate kinase activity F
IDA
DmeFBgn0033754
GO:0016887 ATPase activity F
NAS
SpoSPCC830.11c
GO:0017111 nucleoside-triphosphatase activity F
IMP
SceS000002325
ISS
SceS000002325
SpoSPCC830.11c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000002325
IPI
SceS000002325
GO:0002119 nematode larval development P
IMP
CelWBGene00008458
GO:0006200 ATP catabolic process P
NAS
SpoSPCC830.11c
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002325
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPCC830.11c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000002325
GO:0040007 growth P
IMP
CelWBGene00008458
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008458
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000002325

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1941

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14868 ENSANGP00000012493
Ashbya gossypii (Ago) ago899 ACL150W
Arabidopsis thaliana (Ath) ath28113 At5g60340.1
Caenorhabditis elegans (Cel) cel5232 E02H1.6
(CE28286;
WBGene00008458)
Candida glabrata (Cgl) cgl2665 CAGL0I03366g
Dictyostelium discoideum (Ddi) ddi12691 DDB0230995
Debaryomyces hansenii (Dha) dha6054 DEHA0G07909g
Drosophila melanogaster (Dme) dme4718 CG8816-PA
(FBgn0033754)
Encephalitozoon cuniculi (Ecu) ecu621 19074705
Takifugu rubripes (Fru) fru11340 SINFRUP00000141855
Gallus gallus (Gga) gga25247 ENSGALP00000008037
Homo sapiens (Hsa) hsa25325 ENSP00000261565
Kluyveromyces lactis (Kla) kla2613 KLLA0D12386g
Mus musculus (Mmu) mmu7470 ENSMUSP00000022135
(MGI:1888697)		 Q8VCP8
Neurospora crassa (Ncr) ncr9916 NCU10220.2
Oryza sativa (Osa) osa37531 4868.m00128
Oryza sativa (Osa) osa58338 6258.m00209
Plasmodium falciparum (Pfa) pfa2616 PFA0530c
Rattus norvegicus (Rno) rno17849 ENSRNOP00000033728
Saccharomyces cerevisiae (Sce) sce944 YDL166C
(S000002325)
Schizosaccharomyces pombe (Spo) spo4855 SPCC830.11c Q9UU88
Yarrowia lipolytica (Yli) yli1699 YALI0B22946g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
MmuMGI:1888697
SceS000002325
SpoSPCC830.11c
ISS
SpoSPCC830.11c
GO:0005669 transcription factor TFIID complex C
ISO
MmuMGI:1888697
ISS
SpoSPCC830.11c
GO:0005737 cytoplasm C
IMP
SceS000002325
GO:0005829 cytosol C
IDA
SpoSPCC830.11c
GO:0003677 DNA binding F
IDA
MmuMGI:1888697
GO:0004017 adenylate kinase activity F
IDA
DmeFBgn0033754
GO:0016491 oxidoreductase activity F
ISS
AthAt5g60340
GO:0016887 ATPase activity F
NAS
SpoSPCC830.11c
GO:0017111 nucleoside-triphosphatase activity F
IMP
SceS000002325
ISS
SceS000002325
SpoSPCC830.11c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000002325
IPI
SceS000002325
GO:0002119 nematode larval development P
IMP
CelWBGene00008458
GO:0006200 ATP catabolic process P
NAS
SpoSPCC830.11c
GO:0008152 metabolic process P
ISS
AthAt5g60340
GO:0010552 positive regulation of gene-specific transcription
from RNA polymerase II promoter		 P
IMP
MmuMGI:1888697
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002325
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPCC830.11c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000002325
GO:0040007 growth P
IMP
CelWBGene00008458
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008458
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000002325

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC830.11c
(Q9UU88)		 YDL166C
(S000002325)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002325
SpoSPCC830.11c
ISS
SpoSPCC830.11c
GO:0005669 transcription factor TFIID complex C
ISS
SpoSPCC830.11c
GO:0005737 cytoplasm C
IMP
SceS000002325
GO:0005829 cytosol C
IDA
SpoSPCC830.11c
GO:0016887 ATPase activity F
NAS
SpoSPCC830.11c
GO:0017111 nucleoside-triphosphatase activity F
IMP
SceS000002325
ISS
SceS000002325
SpoSPCC830.11c
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)		 P
IMP
SceS000002325
IPI
SceS000002325
GO:0006200 ATP catabolic process P
NAS
SpoSPCC830.11c
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002325
GO:0030490 maturation of SSU-rRNA P
ISS
SpoSPCC830.11c
GO:0034599 cellular response to oxidative
stress		 P
IMP
SceS000002325
GO:0042274 ribosomal small subunit biogenesis P
RCA
SceS000002325

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GO info in one table:

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