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Search term: YDL171C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GLT1
SGD link S000002330
Alternative ID YDL171C
Description NAD(+)-dependent glutamate synthase (GOGAT), synthesizes glutamate from glutamine and alpha-ketoglutarate; with Gln1p, forms the secondary pathway for glutamate biosynthesis from ammonia; expression regulated by nitrogen source
Synonyms YDL171C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0399 ACD-YP-

KOGs classification KOGs description
METABOLISM Glutamate synthase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g41220 GI:15227306
Arabidopsis thaliana (Ath) At5g04140 GI:12643970
Arabidopsis thaliana (Ath) At5g53460 GI:15238756
Caenorhabditis elegans (Cel) CE02372
(WBGene00012326)		 GI:17570289
Drosophila melanogaster (Dme) 7294054 GI:7294054
Saccharomyces cerevisiae (Sce) YDL171c
(S000002330)		 GI:6320030 Q12680
Schizosaccharomyces pombe (Spo) SPAPB1E7.07 GI:19115045 Q9C102
Arabidopsis thaliana (Ath) At2g41220 GI:15227306
Arabidopsis thaliana (Ath) At5g04140 GI:12643970
Arabidopsis thaliana (Ath) At5g53460 GI:15238756
Caenorhabditis elegans (Cel) CE02372
(WBGene00012326)		 GI:17570289
Drosophila melanogaster (Dme) 7294054 GI:7294054
Saccharomyces cerevisiae (Sce) YDL171c
(S000002330)		 GI:6320030 Q12680
Schizosaccharomyces pombe (Spo) SPAPB1E7.07 GI:19115045 Q9C102
Arabidopsis thaliana (Ath) At2g41220 GI:15227306
Arabidopsis thaliana (Ath) At5g04140 GI:12643970
Arabidopsis thaliana (Ath) At5g53460 GI:15238756
Caenorhabditis elegans (Cel) CE02372
(WBGene00012326)		 GI:17570289
Drosophila melanogaster (Dme) 7294054 GI:7294054
Saccharomyces cerevisiae (Sce) YDL171c
(S000002330)		 GI:6320030 Q12680
Schizosaccharomyces pombe (Spo) SPAPB1E7.07 GI:19115045 Q9C102


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt5g04140
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0005829 cytosol C
IDA
SpoSPAPB1E7.07
GO:0009507 chloroplast C
IDA
AthAt5g53460
At5g04140
At2g41220
GO:0009536 plastid C
TAS
AthAt5g53460
GO:0009570 chloroplast stroma C
IDA
AthAt5g53460
At5g04140
GO:0009941 chloroplast envelope C
IDA
AthAt2g41220
At5g04140
GO:0016020 membrane C
IDA
AthAt5g04140
GO:0048046 apoplast C
IDA
AthAt5g04140
GO:0005515 protein binding F
IPI
AthAt5g04140
GO:0016040 glutamate synthase (NADH) activity F
IDA
AthAt5g53460
SceS000002330
IMP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0016041 glutamate synthase (ferredoxin)
activity		 F
IDA
AthAt5g04140
ISS
AthAt5g04140
At2g41220
GO:0002119 nematode larval development P
IMP
CelWBGene00012326
GO:0006537 glutamate biosynthetic process P
IDA
AthAt5g53460
IEP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0009416 response to light stimulus P
IEP
AthAt5g04140
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012326
GO:0009853 photorespiration P
IMP
AthAt5g04140
TAS
AthAt5g04140
GO:0019676 ammonia assimilation cycle P
IEP
SceS000002330
GO:0040007 growth P
IMP
CelWBGene00012326
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012326
GO:0042128 nitrate assimilation P
TAS
AthAt5g53460
GO:0046483 heterocycle metabolic process P
RCA
SceS000002330
GO:0046686 response to cadmium ion P
IEP
AthAt5g53460
GO:0080114 positive regulation of glycine
hydroxymethyltransferase activity		 P
IDA
AthAt5g04140

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5537

Species Gene ID NCBI link UniProt link
Drosophila melanogaster (Dme) CG9674
(FBgn0036663)		 GI:24665539
Anopheles gambiae (Aga) AgaP_AGAP006360 GI:158295729
Caenorhabditis elegans (Cel) W07E11.1
(CE02372;
WBGene00012326)		 GI:17570289
Schizosaccharomyces pombe (Spo) SPAPB1E7.07 GI:19115045 Q9C102
Saccharomyces cerevisiae (Sce) GLT1
(S000002330)		 GI:6320030 Q12680
Kluyveromyces lactis (Kla) KLLA0E19723g GI:50309655
Eremothecium gossypii (Ego) AGOS_ADR290W GI:45188163
Magnaporthe grisea (Mgr) MGG_07187 GI:145612527
Neurospora crassa (Ncr) NCU01744.1 GI:32415407
Arabidopsis thaliana (Ath) GLT1 GI:30696340
Oryza sativa (Osa) Os01g0681900 GI:115439209
Plasmodium falciparum (Pfa) PF14_0334 GI:124809175


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0005829 cytosol C
IDA
SpoSPAPB1E7.07
GO:0009507 chloroplast C
IDA
AthGLT1
GO:0009536 plastid C
TAS
AthGLT1
GO:0009570 chloroplast stroma C
IDA
AthGLT1
GO:0009941 chloroplast envelope C
IDA
AthGLT1
GO:0016020 membrane C
ISS
AthGLT1
GO:0004355 glutamate synthase (NADPH) activity F
ISS
DmeFBgn0036663
GO:0005351 sugar:hydrogen symporter activity F
ISS
AthGLT1
GO:0015144 carbohydrate transmembrane transporter
activity		 F
ISS
AthGLT1
GO:0016040 glutamate synthase (NADH) activity F
IDA
AthGLT1
SceS000002330
IMP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0002119 nematode larval development P
IMP
CelWBGene00012326
GO:0006537 glutamate biosynthetic process P
IDA
AthGLT1
IEP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012326
GO:0019676 ammonia assimilation cycle P
IEP
SceS000002330
GO:0040007 growth P
IMP
CelWBGene00012326
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012326
GO:0042128 nitrate assimilation P
TAS
AthGLT1
GO:0046483 heterocycle metabolic process P
RCA
SceS000002330
GO:0046686 response to cadmium ion P
IEP
AthGLT1

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_559

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga1795 ENSANGP00000013025
Ashbya gossypii (Ago) ago2031 ADR290W
Arabidopsis thaliana (Ath) ath11276 At2g41220.1
Arabidopsis thaliana (Ath) ath22580 At5g04140.1
Arabidopsis thaliana (Ath) ath22581 At5g04140.2
Arabidopsis thaliana (Ath) ath27313 At5g53460.1
Caenorhabditis elegans (Cel) cel17208 W07E11.1
(CE02372;
WBGene00012326)
Candida glabrata (Cgl) cgl4125 CAGL0L01089g
Cryptococcus neoformans (Cne) cne4024 185.m02647
Debaryomyces hansenii (Dha) dha6446 DEHA0G16713
Debaryomyces hansenii (Dha) dha6447 DEHA0G16716
Drosophila melanogaster (Dme) dme9878 CG9674-PA
(FBgn0036663)
Drosophila melanogaster (Dme) dme9879 CG9674-PB
(FBgn0036663)
Drosophila melanogaster (Dme) dme9880 CG9674-PC
(FBgn0036663)
Drosophila melanogaster (Dme) dme9877 CG9674-PD
(FBgn0036663)
Escherichia coli (Eco) eco2781 16130780
Escherichia coli (Eco) eco3103 16131102
Kluyveromyces lactis (Kla) kla3838 KLLA0E19723g
Neurospora crassa (Ncr) ncr1696 NCU01744.2
Oryza sativa (Osa) osa18232 3335.m00152
Oryza sativa (Osa) osa42017 5142.m00145
Oryza sativa (Osa) osa53204 5955.m00112
Oryza sativa (Osa) osa51862 5987.m00142
Plasmodium falciparum (Pfa) pfa1785 PF14_0334
Saccharomyces cerevisiae (Sce) sce949 YDL171C
(S000002330)
Schizosaccharomyces pombe (Spo) spo2315 SPAPB1E7.07 Q9C102
Yarrowia lipolytica (Yli) yli1573 YALI0B19998g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt5g04140
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0005829 cytosol C
IDA
SpoSPAPB1E7.07
GO:0009507 chloroplast C
IDA
AthAt5g53460
At5g04140
At2g41220
GO:0009536 plastid C
TAS
AthAt5g53460
GO:0009570 chloroplast stroma C
IDA
AthAt5g53460
At5g04140
GO:0009941 chloroplast envelope C
IDA
AthAt2g41220
At5g04140
GO:0016020 membrane C
IDA
AthAt5g04140
GO:0048046 apoplast C
IDA
AthAt5g04140
GO:0004355 glutamate synthase (NADPH) activity F
ISS
DmeFBgn0036663
GO:0005515 protein binding F
IPI
AthAt5g04140
GO:0016040 glutamate synthase (NADH) activity F
IDA
AthAt5g53460
SceS000002330
IMP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0016041 glutamate synthase (ferredoxin)
activity		 F
IDA
AthAt5g04140
ISS
AthAt5g04140
At2g41220
GO:0002119 nematode larval development P
IMP
CelWBGene00012326
GO:0006537 glutamate biosynthetic process P
IDA
AthAt5g53460
IEP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0009416 response to light stimulus P
IEP
AthAt5g04140
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012326
GO:0009853 photorespiration P
IMP
AthAt5g04140
TAS
AthAt5g04140
GO:0019676 ammonia assimilation cycle P
IEP
SceS000002330
GO:0040007 growth P
IMP
CelWBGene00012326
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012326
GO:0042128 nitrate assimilation P
TAS
AthAt5g53460
GO:0046483 heterocycle metabolic process P
RCA
SceS000002330
GO:0046686 response to cadmium ion P
IEP
AthAt5g53460
GO:0080114 positive regulation of glycine
hydroxymethyltransferase activity		 P
IDA
AthAt5g04140

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAPB1E7.07
(Q9C102)		 YDL171C
(S000002330)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0005829 cytosol C
IDA
SpoSPAPB1E7.07
GO:0016040 glutamate synthase (NADH) activity F
IDA
SceS000002330
IMP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0006537 glutamate biosynthetic process P
IEP
SceS000002330
ISS
SpoSPAPB1E7.07
GO:0019676 ammonia assimilation cycle P
IEP
SceS000002330
GO:0046483 heterocycle metabolic process P
RCA
SceS000002330

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Query species:

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GO info in one table:

s.khadayate@ucl.ac.uk