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Search term: YDL201W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRM8
SGD link S000002360
Alternative ID YDL201W
Description Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p that catalyzes 7-methylguanosine modification of tRNA
Synonyms YDL201W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3115 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED Methyltransferase-like protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g17660 GI:15238006
Arabidopsis thaliana (Ath) At5g24840 GI:15238631
Caenorhabditis elegans (Cel) CE03770
(WBGene00012205)		 GI:17536689 Q23126
Drosophila melanogaster (Dme) 7290259 GI:7290259
Homo sapiens (Hsa) Hs10880981 GI:10880981
Homo sapiens (Hsa) Hs13186318 GI:13186318
Homo sapiens (Hsa) Hs13186320 GI:13186320
Homo sapiens (Hsa) Hs22059176 GI:22059176
Saccharomyces cerevisiae (Sce) YDL201w
(S000002360)		 GI:6320000 Q12009
Schizosaccharomyces pombe (Spo) SPCPB16A4.04c GI:19075528 Q96WV1
Encephalitozoon cuniculi (Ecu) ECU11g1520 GI:19074952 Q8SU19


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g24840
GO:0005634 nucleus C
IDA
SceS000002360
SpoSPCPB16A4.04c
ISS
SpoSPCPB16A4.04c
GO:0005730 nucleolus C
IDA
SpoSPCPB16A4.04c
GO:0043234 protein complex C
ISS
SpoSPCPB16A4.04c
GO:0000049 tRNA binding F
IC
SpoSPCPB16A4.04c
GO:0005515 protein binding F
IPI
SceS000002360
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity		 F
IDA
SceS000002360
IMP
SceS000002360
ISS
SceS000002360
SpoSPCPB16A4.04c
GO:0009451 RNA modification P
RCA
SceS000002360
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012205
GO:0030488 tRNA methylation P
IDA
SceS000002360
IMP
SceS000002360
ISS
SpoSPCPB16A4.04c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
3918

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) METTL1 GI:167004078
Pan troglodytes (Ptr) METTL1 GI:114644111
Canis familiaris (Cfa) METTL1 GI:73968576
Mus musculus (Mmu) Mettl1
(MGI:1339986)		 GI:6754682 Q9Z120
Drosophila melanogaster (Dme) CG4045
(FBgn0025629)		 GI:20128915
Anopheles gambiae (Aga) AgaP_AGAP004752 GI:158297936
Caenorhabditis elegans (Cel) W02B12.10
(CE03770;
WBGene00012205)		 GI:17536689 Q23126
Schizosaccharomyces pombe (Spo) SPCPB16A4.04c GI:19075528 Q96WV1
Saccharomyces cerevisiae (Sce) TRM8
(S000002360)		 GI:6320000 Q12009
Kluyveromyces lactis (Kla) KLLA0A03245g GI:50302415
Eremothecium gossypii (Ego) AGOS_AGR192C GI:45201288
Magnaporthe grisea (Mgr) MGG_01021 GI:145610645
Neurospora crassa (Ncr) NCU03936.1 GI:32405284
Arabidopsis thaliana (Ath) AT5G24840 GI:15238631
Oryza sativa (Osa) Os06g0236900 GI:115467290
Plasmodium falciparum (Pfa) PF11_0284 GI:124804279


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g24840
DmeFBgn0025629
GO:0005634 nucleus C
IDA
HsaMETTL1
SceS000002360
SpoSPCPB16A4.04c
ISS
SpoSPCPB16A4.04c
GO:0005730 nucleolus C
IDA
SpoSPCPB16A4.04c
GO:0043234 protein complex C
ISS
SpoSPCPB16A4.04c
GO:0000049 tRNA binding F
IC
SpoSPCPB16A4.04c
GO:0005515 protein binding F
IPI
HsaMETTL1
SceS000002360
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity		 F
IDA
HsaMETTL1
METTL1
SceS000002360
IMP
SceS000002360
ISS
DmeFBgn0025629
SceS000002360
SpoSPCPB16A4.04c
GO:0006400 tRNA modification P
IDA
HsaMETTL1
ISS
DmeFBgn0025629
GO:0008150 biological_process P
ND
PfaPF11_0284
GO:0009451 RNA modification P
RCA
SceS000002360
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012205
GO:0030488 tRNA methylation P
IDA
SceS000002360
IMP
SceS000002360
ISS
SpoSPCPB16A4.04c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2498

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga85 ENSANGP00000003460
Ashbya gossypii (Ago) ago4503 AGR192C
Arabidopsis thaliana (Ath) ath24751 At5g24840.1
Caenorhabditis elegans (Cel) cel16782 W02B12.10
(CE03770;
WBGene00012205)
Candida glabrata (Cgl) cgl3418 CAGL0J09746g
Cryptococcus neoformans (Cne) cne4594 186.m03434
Dictyostelium discoideum (Ddi) ddi1679 DDB0203842
Debaryomyces hansenii (Dha) dha915 DEHA0B05137g
Drosophila melanogaster (Dme) dme16178 CG4045-PA
(FBgn0025629)
Danio rerio (Dre) dre27463 ENSDARP00000016004
(zgc:103636)		 Q5XJ57
Encephalitozoon cuniculi (Ecu) ecu1040 19074952
Takifugu rubripes (Fru) fru21180 SINFRUP00000137968
Homo sapiens (Hsa) hsa7770 ENSP00000314441
(METTL1)		 Q9UBP6
Kluyveromyces lactis (Kla) kla139 KLLA0A03245g
Mus musculus (Mmu) mmu2941 ENSMUSP00000006915
(MGI:1339986)		 Q9Z120
Neurospora crassa (Ncr) ncr3825 NCU03936.2
Oryza sativa (Osa) osa30613 4324.m00190
Oryza sativa (Osa) osa34471 4681.m00162
Plasmodium falciparum (Pfa) pfa735 PF11_0284
Saccharomyces cerevisiae (Sce) sce980 YDL201W
(S000002360)
Schizosaccharomyces pombe (Spo) spo1888 SPCPB16A4.04c Q96WV1
Yarrowia lipolytica (Yli) yli1555 YALI0B19558g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g24840
DmeFBgn0025629
GO:0005634 nucleus C
IDA
SceS000002360
SpoSPCPB16A4.04c
ISS
SpoSPCPB16A4.04c
GO:0005730 nucleolus C
IDA
SpoSPCPB16A4.04c
GO:0043234 protein complex C
ISS
SpoSPCPB16A4.04c
GO:0000049 tRNA binding F
IC
SpoSPCPB16A4.04c
GO:0005515 protein binding F
IPI
SceS000002360
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity		 F
IDA
SceS000002360
IMP
SceS000002360
ISS
DmeFBgn0025629
SceS000002360
SpoSPCPB16A4.04c
GO:0006400 tRNA modification P
ISS
DmeFBgn0025629
GO:0008150 biological_process P
ND
PfaPF11_0284
GO:0009451 RNA modification P
RCA
SceS000002360
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00012205
GO:0030488 tRNA methylation P
IDA
SceS000002360
IMP
SceS000002360
ISS
SpoSPCPB16A4.04c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCPB16A4.04c
(Q96WV1)		 YDL201W
(S000002360)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002360
SpoSPCPB16A4.04c
ISS
SpoSPCPB16A4.04c
GO:0005730 nucleolus C
IDA
SpoSPCPB16A4.04c
GO:0043234 protein complex C
ISS
SpoSPCPB16A4.04c
GO:0000049 tRNA binding F
IC
SpoSPCPB16A4.04c
GO:0005515 protein binding F
IPI
SceS000002360
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity		 F
IDA
SceS000002360
IMP
SceS000002360
ISS
SceS000002360
SpoSPCPB16A4.04c
GO:0009451 RNA modification P
RCA
SceS000002360
GO:0030488 tRNA methylation P
IDA
SceS000002360
IMP
SceS000002360
ISS
SpoSPCPB16A4.04c

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GO info in one table:

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