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Search term: YDL204W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RTN2
SGD link S000002363
Alternative ID YDL204W
Description Protein of unknown function; has similarity to mammalian reticulon proteins; member of the RTNLA (reticulon-like A) subfamily
Synonyms YDL204W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1792 ACDHY--

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Reticulon

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g64090 GI:15222616
Arabidopsis thaliana (Ath) At1g68230 GI:15221333
Arabidopsis thaliana (Ath) At2g01240 GI:15226209
Arabidopsis thaliana (Ath) At2g15280 GI:15226081
Arabidopsis thaliana (Ath) At2g23640 GI:18400337
Arabidopsis thaliana (Ath) At2g46170 GI:18406991
Arabidopsis thaliana (Ath) At3g10260 GI:18398810
Arabidopsis thaliana (Ath) At3g18260 GI:18401821
Arabidopsis thaliana (Ath) At3g19460 GI:18402246
Arabidopsis thaliana (Ath) At3g54120 GI:15232423
Arabidopsis thaliana (Ath) At3g61560 GI:15233147
Arabidopsis thaliana (Ath) At4g01230 GI:15234108
Arabidopsis thaliana (Ath) At4g11220 GI:15237093
Arabidopsis thaliana (Ath) At4g23630 GI:15236556
Arabidopsis thaliana (Ath) At5g41600 GI:15238125
Caenorhabditis elegans (Cel) CE14668 GI:17565082 Q23188
Drosophila melanogaster (Dme) 7296921 GI:19920716
Drosophila melanogaster (Dme) 7296925 GI:7296925
Drosophila melanogaster (Dme) 7298799 GI:7298799 Q9VIB7
Homo sapiens (Hsa) Hs10863935
(RTN1)		 GI:10863935 Q16799
Homo sapiens (Hsa) Hs14729419 GI:14729419
Homo sapiens (Hsa) Hs17444699 GI:17444699
Homo sapiens (Hsa) Hs5032055 GI:5032055 O75298
Homo sapiens (Hsa) Hs5174655 GI:5174655 Q9BVW7
Homo sapiens (Hsa) Hs5902016 GI:5902016 Q9Y293
Saccharomyces cerevisiae (Sce) YDL204w
(S000002363)		 GI:6319997 Q12443
Saccharomyces cerevisiae (Sce) YDR233c
(S000002641)		 GI:6320439 Q04947


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SceS000002363
GO:0005739 mitochondrion C
IDA
AthAt3g10260
SceS000002641
GO:0005773 vacuole C
IDA
AthAt4g23630
GO:0005783 endoplasmic reticulum C
IDA
AthAt1g64090
At2g46170
SceS000002363
S000002641
ISS
AthAt4g11220
At4g23630
At5g41600
At3g61560
At2g23640
At1g68230
At1g64090
At2g15280
At3g19460
At4g01230
At3g54120
At2g46170
At3g10260
At3g18260
GO:0005789 endoplasmic reticulum membrane C
IDA
AthAt2g23640
At4g23630
At5g41600
At4g11220
At1g64090
GO:0005794 Golgi apparatus C
IDA
SceS000002641
GO:0005886 plasma membrane C
IDA
AthAt4g11220
At4g23630
At5g41600
At2g46170
At3g61560
GO:0030176 integral to endoplasmic reticulum
membrane		 C
IDA
SceS000002641
TAS
HsaRTN1
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000002363
S000002641
GO:0003674 molecular_function F
ND
AthAt4g01230
At3g18260
At2g23640
At1g68230
At2g15280
At3g19460
At3g54120
SceS000002363
S000002641
GO:0004871 signal transducer activity F
NAS
HsaRTN1
GO:0006606 protein import into nucleus P
IGI
SceS000002641
GO:0007029 endoplasmic reticulum organization P
IGI
SceS000002641
GO:0007165 signal transduction P
NAS
HsaRTN1
GO:0008104 protein localization P
IGI
SceS000002641
GO:0008150 biological_process P
ND
AthAt1g68230
At1g64090
At4g11220
At5g41600
At2g01240
At3g61560
At2g23640
At3g54120
At4g23630
At2g15280
At4g01230
At3g18260
At3g19460
SceS000002363
GO:0030182 neuron differentiation P
IEP
HsaRTN1

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_18586

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Homo sapiens (Hsa) hsa16637 ENSP00000245923
(RTN2)		 O75298-1
Homo sapiens (Hsa) hsa16636 ENSP00000345127
(RTN2)		 O75298-2
Mus musculus (Mmu) mmu23277 ENSMUSP00000032559
(MGI:107612)		 O70622-1
Rattus norvegicus (Rno) rno1184 ENSRNOP00000022528
(RGD:1303245)		 Q6WN19
Saccharomyces cerevisiae (Sce) sce983 YDL204W
(S000002363)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SceS000002363
GO:0005783 endoplasmic reticulum C
IDA
SceS000002363
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000002363
GO:0003674 molecular_function F
ND
MmuMGI:107612
SceS000002363
GO:0008150 biological_process P
ND
SceS000002363

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC31A8.01c
(P53694)		 YDL204W
(S000002363)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0071786
IMP
SpoSPBC31A8.01c
GO:0005635 nuclear envelope C
IDA
SceS000002363
SpoSPBC31A8.01c
GO:0005783 endoplasmic reticulum C
IDA
SceS000002363
SpoSPBC31A8.01c
GO:0016020 membrane C
NAS
SpoSPBC31A8.01c
GO:0032153 cell division site C
IDA
SpoSPBC31A8.01c
GO:0032541 cortical endoplasmic reticulum C
IDA
SceS000002363
SpoSPBC31A8.01c
GO:0003674 molecular_function F
ND
SceS000002363
GO:0005515 protein binding F
IPI
SpoSPBC31A8.01c
GO:0007105 cytokinesis, site selection P
IMP
SpoSPBC31A8.01c
GO:0008150 biological_process P
ND
SceS000002363
GO:0034613 cellular protein localization P
IMP
SpoSPBC31A8.01c

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