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Search term: YDL213C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NOP6
SGD link S000002372
Alternative ID YDL213C
Description Putative RNA-binding protein implicated in ribosome biogenesis; contains an RNA recognition motif (RRM) and has similarity to hydrophilins; NOP6 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes
Synonyms YDL213C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
36230

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC365.04c GI:19112825 Q9Y7Y3
Saccharomyces cerevisiae (Sce) NOP6
(S000002372)		 GI:6319988
Kluyveromyces lactis (Kla) KLLA0D08393g GI:50306921
Eremothecium gossypii (Ego) AGOS_ABL142C GI:45185088
Magnaporthe grisea (Mgr) MGG_02730 GI:39970527
Neurospora crassa (Ncr) NCU02159.1 GI:32417742


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC365.04c
GO:0005730 nucleolus C
IDA
SceS000002372
SpoSPBC365.04c
ISS
SpoSPBC365.04c
GO:0003723 RNA binding F
ISS
SceS000002372
SpoSPBC365.04c
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC365.04c
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000002372

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_10627

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11306 ENSANGP00000016779
Ashbya gossypii (Ago) ago450 ABL142C
Candida glabrata (Cgl) cgl1872 CAGL0G05742g
Cryptococcus neoformans (Cne) cne862 163.m06216
Debaryomyces hansenii (Dha) dha4567 DEHA0F04026g
Drosophila melanogaster (Dme) dme7087 CG3594-PA
(FBgn0035063)
Kluyveromyces lactis (Kla) kla2435 KLLA0D08393g
Neurospora crassa (Ncr) ncr2101 NCU02159.2
Saccharomyces cerevisiae (Sce) sce992 YDL213C
(S000002372)
Schizosaccharomyces pombe (Spo) spo2359 SPBC365.04c Q9Y7Y3
Yarrowia lipolytica (Yli) yli4925 YALI0E25872g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC365.04c
GO:0005730 nucleolus C
IDA
SceS000002372
SpoSPBC365.04c
ISS
SpoSPBC365.04c
GO:0003723 RNA binding F
ISS
SceS000002372
SpoSPBC365.04c
GO:0003729 mRNA binding F
ISS
DmeFBgn0035063
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC365.04c
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000002372

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC365.04c
(Q9Y7Y3)		 YDL213C
(S000002372)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC365.04c
GO:0005730 nucleolus C
IDA
SceS000002372
SpoSPBC365.04c
ISS
SpoSPBC365.04c
GO:0003723 RNA binding F
ISS
SceS000002372
SpoSPBC365.04c
GO:0042254 ribosome biogenesis P
ISS
SpoSPBC365.04c
GO:0042274 ribosomal small subunit biogenesis P
IGI
SceS000002372

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s.khadayate@ucl.ac.uk