YOGY Home YOGY Help

Search term: YDL231C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BRE4
SGD link S000002390
Alternative ID YDL231C
Description Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport
Synonyms YDL231C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4711 A---YP-

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted membrane protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g08430 GI:15223208
Arabidopsis thaliana (Ath) At1g08440 GI:15223209
Arabidopsis thaliana (Ath) At1g18420 GI:15221767
Arabidopsis thaliana (Ath) At1g25480 GI:15222599
Arabidopsis thaliana (Ath) At1g68600 GI:5734718
Arabidopsis thaliana (Ath) At2g17470 GI:15227843
Arabidopsis thaliana (Ath) At2g27240 GI:15225860
Arabidopsis thaliana (Ath) At3g11680 GI:15229827
Arabidopsis thaliana (Ath) At3g18440 GI:15229641
Arabidopsis thaliana (Ath) At4g00910 GI:18411477
Arabidopsis thaliana (Ath) At4g17585 GI:15236584
Arabidopsis thaliana (Ath) At4g17970 GI:15236718
Arabidopsis thaliana (Ath) At5g46600 GI:15237471
Arabidopsis thaliana (Ath) At5g46610 GI:15237473
Saccharomyces cerevisiae (Sce) YDL231c
(S000002390)		 GI:6319970 Q07660
Saccharomyces cerevisiae (Sce) YGL140c GI:6321298 P53120
Schizosaccharomyces pombe (Spo) SPAC26F1.08c GI:19115799 Q10495
Schizosaccharomyces pombe (Spo) SPAC57A7.05 GI:19114288 P87136


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g46600
At1g68600
At4g00910
At1g25480
At1g08430
At4g17585
At5g46610
SceYGL140c
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC26F1.08c
SPAC57A7.05
GO:0009705 plant-type vacuole membrane C
IDA
AthAt3g18440
GO:0012505 endomembrane system C
IDA
AthAt4g17970
GO:0016021 integral to membrane C
ISS
SceS000002390
NAS
SpoSPAC26F1.08c
GO:0003674 molecular_function F
ND
AthAt5g46610
At1g25480
At5g46600
At4g00910
At4g17585
SceYGL140c
S000002390
SpoSPAC57A7.05
SPAC26F1.08c
GO:0005253 anion channel activity F
IDA
AthAt3g18440
GO:0008509 anion transmembrane transporter
activity		 F
IDA
AthAt4g17970
GO:0015140 malate transmembrane transporter
activity		 F
IDA
AthAt1g08430
GO:0006414 translational elongation P
RCA
SceS000002390
GO:0006897 endocytosis P
IMP
SceS000002390
GO:0008150 biological_process P
ND
AthAt5g46610
At1g68600
At2g17470
At2g27240
At4g00910
At5g46600
At1g25480
At4g17585
SceYGL140c
SpoSPAC26F1.08c
GO:0010044 response to aluminum ion P
IEP
AthAt1g08430
IMP
AthAt1g08430
GO:0010118 stomatal movement P
IMP
AthAt4g17970
GO:0015743 malate transport P
IMP
AthAt3g18440
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A7.05

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
74622

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) BRE4
(S000002390)		 GI:6319970 Q07660
Kluyveromyces lactis (Kla) KLLA0D19118g GI:50307833


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0016021 integral to membrane C
ISS
SceS000002390
GO:0003674 molecular_function F
ND
SceS000002390
GO:0006414 translational elongation P
RCA
SceS000002390
GO:0006897 endocytosis P
IMP
SceS000002390

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20686

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago421 ABL171W
Candida glabrata (Cgl) cgl651 CAGL0C05445g
Cryptococcus neoformans (Cne) cne2316 181.m08340
Kluyveromyces lactis (Kla) kla2909 KLLA0D19118g
Saccharomyces cerevisiae (Sce) sce1010 YDL231C
(S000002390)
Yarrowia lipolytica (Yli) yli6614 YALI0F30921g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0016021 integral to membrane C
ISS
SceS000002390
GO:0003674 molecular_function F
ND
SceS000002390
GO:0006414 translational elongation P
RCA
SceS000002390
GO:0006897 endocytosis P
IMP
SceS000002390

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC57A7.05
(P87136)		 YDL231C
(S000002390)
SPAC26F1.08c
(Q10495)		 YDL231C
(S000002390)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC26F1.08c
SPAC57A7.05
GO:0016021 integral to membrane C
ISS
SceS000002390
NAS
SpoSPAC26F1.08c
GO:0003674 molecular_function F
ND
SceS000002390
SpoSPAC57A7.05
SPAC26F1.08c
GO:0006414 translational elongation P
RCA
SceS000002390
GO:0006897 endocytosis P
IMP
SceS000002390
GO:0008150 biological_process P
ND
SpoSPAC26F1.08c
GO:0033554 cellular response to stress P
IEP
SpoSPAC57A7.05

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk