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Search term: YDR002W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name YRB1
SGD link S000002409
Alternative ID YDR002W
Description Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1
Synonyms YDR002W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0864 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ran-binding protein RANBP1 and related RanBD domain proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g07140 GI:15222310
Arabidopsis thaliana (Ath) At1g52380 GI:18403992
Arabidopsis thaliana (Ath) At2g30060 GI:15227700
Arabidopsis thaliana (Ath) At3g15970 GI:18400970
Arabidopsis thaliana (Ath) At5g58590 GI:15237709
Caenorhabditis elegans (Cel) CE17939
(WBGene00003795)		 GI:17553754 Q21021
Drosophila melanogaster (Dme) 7301301 GI:7301301
Homo sapiens (Hsa) Hs13653066 GI:13653066
Homo sapiens (Hsa) Hs14149991 GI:14149991 O14715
Homo sapiens (Hsa) Hs18579987 GI:18579987
Homo sapiens (Hsa) Hs19718755 GI:19718755
Homo sapiens (Hsa) Hs22040856 GI:22040856
Homo sapiens (Hsa) Hs22041001 GI:22041001
Homo sapiens (Hsa) Hs22045782 GI:22045782
Homo sapiens (Hsa) Hs4506407
(RANBP1)		 GI:4506407 P43487
Homo sapiens (Hsa) Hs6382079_1 GI:6382079
Homo sapiens (Hsa) Hs7662062_2 GI:7662062 Q8IWJ2
Saccharomyces cerevisiae (Sce) YDR002w
(S000002409)		 GI:6320205 P41920
Saccharomyces cerevisiae (Sce) YIL063c
(S000001325)		 GI:6322126 P40517
Saccharomyces cerevisiae (Sce) YLR335w_2 GI:6323367 P32499
Schizosaccharomyces pombe (Spo) SPBC1773.07c GI:19111914 Q09717
Schizosaccharomyces pombe (Spo) SPBC365.13c_2 GI:19112834 Q09146
Encephalitozoon cuniculi (Ecu) ECU02g0140 GI:19073935 Q8SSI6
Arabidopsis thaliana (Ath) At1g07140 GI:15222310
Arabidopsis thaliana (Ath) At1g52380 GI:18403992
Arabidopsis thaliana (Ath) At2g30060 GI:15227700
Arabidopsis thaliana (Ath) At3g15970 GI:18400970
Arabidopsis thaliana (Ath) At5g58590 GI:15237709
Caenorhabditis elegans (Cel) CE17939
(WBGene00003795)		 GI:17553754 Q21021
Drosophila melanogaster (Dme) 7301301 GI:7301301
Homo sapiens (Hsa) Hs13653066 GI:13653066
Homo sapiens (Hsa) Hs14149991 GI:14149991 O14715
Homo sapiens (Hsa) Hs18579987 GI:18579987
Homo sapiens (Hsa) Hs19718755 GI:19718755
Homo sapiens (Hsa) Hs22040856 GI:22040856
Homo sapiens (Hsa) Hs22041001 GI:22041001
Homo sapiens (Hsa) Hs22045782 GI:22045782
Homo sapiens (Hsa) Hs4506407
(RANBP1)		 GI:4506407 P43487
Homo sapiens (Hsa) Hs6382079_1 GI:6382079
Homo sapiens (Hsa) Hs7662062_2 GI:7662062 Q8IWJ2
Saccharomyces cerevisiae (Sce) YDR002w
(S000002409)		 GI:6320205 P41920
Saccharomyces cerevisiae (Sce) YIL063c
(S000001325)		 GI:6322126 P40517
Saccharomyces cerevisiae (Sce) YLR335w_2 GI:6323367 P32499
Schizosaccharomyces pombe (Spo) SPBC1773.07c GI:19111914 Q09717
Schizosaccharomyces pombe (Spo) SPBC365.13c_2 GI:19112834 Q09146
Encephalitozoon cuniculi (Ecu) ECU02g0140 GI:19073935 Q8SSI6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g07140
At2g30060
At3g15970
At5g58590
GO:0005634 nucleus C
IDA
AthAt1g52380
SceS000002409
S000001325
SpoSPBC365.13c
TAS
HsaRANBP1
GO:0005643 nuclear pore C
IDA
CelWBGene00003795
SceS000001325
GO:0005654 nucleoplasm C
IDA
SpoSPBC365.13c
GO:0005737 cytoplasm C
IDA
SceS000002409
TAS
HsaRANBP1
GO:0005829 cytosol C
IDA
AthAt1g52380
SpoSPBC1773.07c
GO:0003674 molecular_function F
ND
AthAt3g15970
At1g52380
SceS000001325
GO:0005092 GDP-dissociation inhibitor activity F
TAS
HsaRANBP1
GO:0005515 protein binding F
IPI
AthAt5g58590
HsaRANBP1
GO:0005525 GTP binding F
TAS
SpoSPBC1773.07c
GO:0008536 Ran GTPase binding F
IDA
SceS000002409
ISS
AthAt2g30060
At1g07140
SpoSPBC365.13c
TAS
HsaRANBP1
GO:0000003 reproduction P
IMP
CelWBGene00003795
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000001325
S000002409
GO:0000056 ribosomal small subunit export from
nucleus		 P
IMP
SceS000001325
ISS
SpoSPBC365.13c
GO:0000060 protein import into nucleus, translocation P
ISS
AthAt2g30060
At1g07140
TAS
AthAt5g58590
GO:0000082 G1/S transition of mitotic cell
cycle		 P
IMP
SceS000002409
GO:0006405 RNA export from nucleus P
IMP
SceS000002409
ISS
SpoSPBC1773.07c
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
IMP
SceS000002409
GO:0006606 protein import into nucleus P
IMP
SceS000002409
ISS
SpoSPBC1773.07c
GO:0006611 protein export from nucleus P
IMP
SceS000001325
SpoSPBC365.13c
GO:0006997 nucleus organization P
IMP
CelWBGene00003795
GO:0007165 signal transduction P
TAS
HsaRANBP1
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003795
GO:0016246 RNA interference P
IMP
CelWBGene00003795
GO:0031291 Ran protein signal transduction P
IGI
SpoSPBC1773.07c
GO:0031938 regulation of chromatin silencing at
telomere		 P
IMP
SceS000001325
GO:0034599 cellular response to oxidative
stress		 P
IGI
SpoSPBC365.13c
GO:0040002 collagen and cuticulin-based cuticle
development		 P
IMP
CelWBGene00003795
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003795
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003795
GO:0040039 inductive cell migration P
IMP
CelWBGene00003795
GO:0071238 cellular response to brefeldin
A		 P
IMP
SpoSPBC365.13c
GO:0071313 cellular response to caffeine P
IMP
SpoSPBC365.13c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
21600

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RANBP1 GI:4506407 P43487
Pan troglodytes (Ptr) RANBP1 GI:114685193
Canis familiaris (Cfa) RANBP1 GI:73995897
Mus musculus (Mmu) Ranbp1
(MGI:96269)		 GI:6755284 P34022
Rattus norvegicus (Rno) Ranbp1 GI:62658198
Gallus gallus (Gga) RANBP1 GI:57525160
Schizosaccharomyces pombe (Spo) sbp1
(SPBC1773.07c)		 GI:19111914 Q09717
Saccharomyces cerevisiae (Sce) YRB1
(S000002409)		 GI:6320205 P41920
Kluyveromyces lactis (Kla) KLLA0E17281g GI:50309437
Eremothecium gossypii (Ego) AGOS_AER002W GI:45190608
Magnaporthe grisea (Mgr) MGG_05203 GI:39940074
Neurospora crassa (Ncr) NCU00443.1 GI:32403832
Arabidopsis thaliana (Ath) RANBP1 GI:30697102
Arabidopsis thaliana (Ath) SIRANBP GI:15222310
Arabidopsis thaliana (Ath) AT2G30060 GI:15227700
Oryza sativa (Osa) Os03g0292800 GI:115452411
Oryza sativa (Osa) Os05g0350600 GI:115463351
Plasmodium falciparum (Pfa) PFD0950w GI:124505525


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthSIRANBP
At2g30060
GO:0005634 nucleus C
IDA
SceS000002409
TAS
HsaRANBP1
GO:0005737 cytoplasm C
IDA
MmuMGI:96269
SceS000002409
TAS
HsaRANBP1
GO:0005813 centrosome C
IDA
MmuMGI:96269
GO:0005829 cytosol C
IDA
SpoSPBC1773.07c
GO:0003924 GTPase activity F
ISS
PfaPFD0950w
GO:0005092 GDP-dissociation inhibitor activity F
TAS
HsaRANBP1
GO:0005515 protein binding F
IPI
HsaRANBP1
GO:0005525 GTP binding F
ISS
PfaPFD0950w
TAS
SpoSPBC1773.07c
GO:0008536 Ran GTPase binding F
IDA
SceS000002409
ISS
AthSIRANBP
At2g30060
TAS
HsaRANBP1
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000002409
GO:0000060 protein import into nucleus, translocation P
ISS
AthSIRANBP
At2g30060
GO:0000082 G1/S transition of mitotic cell
cycle		 P
IMP
SceS000002409
GO:0006260 DNA replication P
ISS
PfaPFD0950w
GO:0006405 RNA export from nucleus P
IMP
SceS000002409
ISS
SpoSPBC1773.07c
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
IMP
SceS000002409
GO:0006606 protein import into nucleus P
IMP
SceS000002409
ISS
SpoSPBC1773.07c
GO:0007051 spindle organization P
IDA
MmuMGI:96269
GO:0007165 signal transduction P
TAS
HsaRANBP1
GO:0031291 Ran protein signal transduction P
IGI
SpoSPBC1773.07c
GO:0046604 positive regulation of mitotic centrosome
separation		 P
IDA
MmuMGI:96269

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1684

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2507 AER002W
Arabidopsis thaliana (Ath) ath690 At1g07140.1
Arabidopsis thaliana (Ath) ath9984 At2g30060.1
Arabidopsis thaliana (Ath) ath27914 At5g58590.1
Candida glabrata (Cgl) cgl603 CAGL0C04301g
Cryptococcus neoformans (Cne) cne1872 181.m07838
Dictyostelium discoideum (Ddi) ddi8517 DDB0187464
Debaryomyces hansenii (Dha) dha796 DEHA0B02607g
Danio rerio (Dre) dre1211 ENSDARP00000025538
(ranbp1)		 Q90Z38
Danio rerio (Dre) dre26727 ENSDARP00000049267
Danio rerio (Dre) dre27533 ENSDARP00000050431
Encephalitozoon cuniculi (Ecu) ecu14 19073935
Takifugu rubripes (Fru) fru9769 SINFRUP00000158770
Gallus gallus (Gga) gga7068 ENSGALP00000003284
(RANBP1)		 Q5ZJ38
Homo sapiens (Hsa) hsa32574 ENSP00000301953
Homo sapiens (Hsa) hsa21207 ENSP00000327583
(RANBP1)		 P43487
Kluyveromyces lactis (Kla) kla3725 KLLA0E17281g
Mus musculus (Mmu) mmu10021 ENSMUSP00000055288
(MGI:96269)
Neurospora crassa (Ncr) ncr429 NCU00443.2
Oryza sativa (Osa) osa18127 3330.m00155
Oryza sativa (Osa) osa60687 6421.m00142
Oryza sativa (Osa) osa74649 7337.m00104
Oryza sativa (Osa) osa74716 7339.m00142
Plasmodium falciparum (Pfa) pfa3348 PFD0950w
Rattus norvegicus (Rno) rno7718 ENSRNOP00000002579
(RGD:1310521)
Rattus norvegicus (Rno) rno7717 ENSRNOP00000030293
Rattus norvegicus (Rno) rno7255 ENSRNOP00000037917
Saccharomyces cerevisiae (Sce) sce1031 YDR002W
(S000002409)
Schizosaccharomyces pombe (Spo) spo1534 SPBC1773.07c Q09717
Yarrowia lipolytica (Yli) yli1366 YALI0B15081g