YOGY Home YOGY Help

Search term: YDR003W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RCR2
SGD link S000002410
Alternative ID YDR003W
Description Vacuolar protein that presumably functions within the endosomal-vacuolar trafficking pathway, affecting events that determine whether plasma membrane proteins are degraded or routed to the plasma membrane; similar to Rcr1p
Synonyms YDR003W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48610

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RCR1
(S000000209)		 GI:6319477
Saccharomyces cerevisiae (Sce) RCR2
(S000002410)		 GI:6320206
Kluyveromyces lactis (Kla) KLLA0E17501g GI:50309457


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000002410
GO:0005737 cytoplasm C
IDA
SceS000002410
GO:0016021 integral to membrane C
ISS
SceS000002410
GO:0030176 integral to endoplasmic reticulum
membrane		 C
IDA
SceS000000209
ISS
SceS000000209
GO:0031982 vesicle C
IDA
SceS000002410
GO:0003674 molecular_function F
ND
SceS000000209
S000002410
GO:0006914 autophagy P
RCA
SceS000002410
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002410
GO:0016192 vesicle-mediated transport P
IGI
SceS000000209
S000002410
GO:0031505 fungal-type cell wall organization P
IMP
SceS000000209

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13244

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2511 AER006W
Candida glabrata (Cgl) cgl5112 CAGL0M10417g
Debaryomyces hansenii (Dha) dha1251 DEHA0B13178g
Kluyveromyces lactis (Kla) kla3735 KLLA0E17501g
Kluyveromyces lactis (Kla) kla3736 KLLA0E17523g
Neurospora crassa (Ncr) ncr8402 NCU08621.2
Saccharomyces cerevisiae (Sce) sce256 YBR005W
(S000000209)
Saccharomyces cerevisiae (Sce) sce1032 YDR003W
(S000002410)
Yarrowia lipolytica (Yli) yli4567 YALI0E17127g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000002410
GO:0005737 cytoplasm C
IDA
SceS000002410
GO:0016021 integral to membrane C
ISS
SceS000002410
GO:0030176 integral to endoplasmic reticulum
membrane		 C
IDA
SceS000000209
ISS
SceS000000209
GO:0031982 vesicle C
IDA
SceS000002410
GO:0003674 molecular_function F
ND
SceS000000209
S000002410
GO:0006914 autophagy P
RCA
SceS000002410
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002410
GO:0016192 vesicle-mediated transport P
IGI
SceS000000209
S000002410
GO:0031505 fungal-type cell wall organization P
IMP
SceS000000209

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC19C7.05
(O60154)		 YDR003W
(S000002410)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000324 fungal-type vacuole C
IDA
SceS000002410
GO:0005737 cytoplasm C
IDA
SceS000002410
GO:0005789 endoplasmic reticulum membrane C
ISS
SpoSPBC19C7.05
GO:0005794 Golgi apparatus C
IDA
SpoSPBC19C7.05
GO:0016021 integral to membrane C
ISS
SceS000002410
GO:0031982 vesicle C
IDA
SceS000002410
GO:0003674 molecular_function F
ND
SceS000002410
SpoSPBC19C7.05
GO:0006914 autophagy P
RCA
SceS000002410
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002410
GO:0007047 cellular cell wall organization P
ISS
SpoSPBC19C7.05
GO:0016192 vesicle-mediated transport P
IGI
SceS000002410
ISS
SpoSPBC19C7.05

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk