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Search term: YDR007W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRP1
SGD link S000002414
Alternative ID YDR007W
Description Phosphoribosylanthranilate isomerase that catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA)
Synonyms YDR007W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4202 A---YP-

KOGs classification KOGs description
METABOLISM Phosphoribosylanthranilate isomerase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g07780 GI:15223003
Arabidopsis thaliana (Ath) At1g29410_1 GI:15218922
Arabidopsis thaliana (Ath) At5g05590 GI:15239177
Saccharomyces cerevisiae (Sce) YDR007w
(S000002414)		 GI:6320210 P00912
Schizosaccharomyces pombe (Spo) SPBC1539.09c_3 GI:19113615 Q92370


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000002414
GO:0005829 cytosol C
IDA
SpoSPBC1539.09c
GO:0005950 anthranilate synthase complex C
ISS
SpoSPBC1539.09c
GO:0009507 chloroplast C
IDA
AthAt1g29410
At5g05590
At1g07780
ISS
AthAt5g05590
GO:0004049 anthranilate synthase activity F
ISS
SpoSPBC1539.09c
GO:0004425 indole-3-glycerol-phosphate synthase
activity		 F
ISS
SpoSPBC1539.09c
GO:0004640 phosphoribosylanthranilate isomerase
activity		 F
IDA
SceS000002414
IGI
AthAt1g29410
At5g05590
At1g07780
IMP
AthAt1g07780
SceS000002414
ISS
AthAt1g29410
At5g05590
GO:0000162 tryptophan biosynthetic process P
IDA
SceS000002414
IMP
AthAt1g07780
At5g05590
SceS000002414
ISS
SpoSPBC1539.09c
TAS
AthAt5g05590
At1g29410
At1g07780
GO:0007275 multicellular organismal development P
IMP
AthAt1g29410
GO:0009411 response to UV P
IEP
AthAt1g29410
GO:0009628 response to abiotic stimulus P
IEP
AthAt1g29410
GO:0040007 growth P
IMP
AthAt1g29410

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38641

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TRP1
(S000002414)		 GI:6320210 P00912
Kluyveromyces lactis (Kla) TRPF_KLULA GI:50309475
Eremothecium gossypii (Ego) AGOS_AER014W GI:45190620
Arabidopsis thaliana (Ath) PAI1 GI:145362241
Arabidopsis thaliana (Ath) PAI3 GI:30690721
Arabidopsis thaliana (Ath) PAI2 GI:30681012
Oryza sativa (Osa) Os02g0266000 GI:115445445


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000002414
GO:0009507 chloroplast C
IDA
AthPAI3
PAI1
PAI2
ISS
AthPAI2
GO:0004640 phosphoribosylanthranilate isomerase
activity		 F
IDA
SceS000002414
IGI
AthPAI1
PAI3
PAI2
IMP
AthPAI1
SceS000002414
ISS
AthPAI3
PAI2
GO:0000162 tryptophan biosynthetic process P
IDA
SceS000002414
IMP
AthPAI1
PAI2
SceS000002414
TAS
AthPAI1
PAI2
PAI3
GO:0007275 multicellular organismal development P
IMP
AthPAI3
GO:0009411 response to UV P
IEP
AthPAI3
GO:0009628 response to abiotic stimulus P
IEP
AthPAI3
GO:0040007 growth P
IMP
AthPAI3

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3162

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2519 AER014W
Arabidopsis thaliana (Ath) ath767 At1g07780.1
Arabidopsis thaliana (Ath) ath768 At1g07780.2
Arabidopsis thaliana (Ath) ath769 At1g07780.3
Arabidopsis thaliana (Ath) ath3071 At1g29410.1
Arabidopsis thaliana (Ath) ath3072 At1g29410.2
Arabidopsis thaliana (Ath) ath22739 At5g05590.1
Arabidopsis thaliana (Ath) ath22740 At5g05590.2
Candida glabrata (Cgl) cgl593 CAGL0C04092g
Debaryomyces hansenii (Dha) dha612 DEHA0A13695g
Kluyveromyces lactis (Kla) kla3744 KLLA0E17699g
Oryza sativa (Osa) osa20812 3635.m00290
Saccharomyces cerevisiae (Sce) sce1037 YDR007W
(S000002414)
Yarrowia lipolytica (Yli) yli1049 YALI0B07667g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000002414
GO:0009507 chloroplast C
IDA
AthAt1g29410
At5g05590
At1g07780
ISS
AthAt5g05590
GO:0004640 phosphoribosylanthranilate isomerase
activity		 F
IDA
SceS000002414
IGI
AthAt1g29410
At5g05590
At1g07780
IMP
AthAt1g07780
SceS000002414
ISS
AthAt1g29410
At5g05590
GO:0000162 tryptophan biosynthetic process P
IDA
SceS000002414
IMP
AthAt1g07780
At5g05590
SceS000002414
TAS
AthAt5g05590
At1g29410
At1g07780
GO:0007275 multicellular organismal development P
IMP
AthAt1g29410
GO:0009411 response to UV P
IEP
AthAt1g29410
GO:0009628 response to abiotic stimulus P
IEP
AthAt1g29410
GO:0040007 growth P
IMP
AthAt1g29410

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