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Search term: YDR021W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name FAL1
SGD link S000002428
Alternative ID YDR021W
Description Nucleolar protein required for maturation of 18S rRNA, member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases
Synonyms YDR021W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0328 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g51380 GI:15223841
Arabidopsis thaliana (Ath) At3g19760 GI:15230945
Arabidopsis thaliana (Ath) At4g37020 GI:15234591
Caenorhabditis elegans (Cel) CE09901
(WBGene00018007)
GI:17507121 O44781
Caenorhabditis elegans (Cel) CE25531 GI:17510385
Drosophila melanogaster (Dme) 7299019 GI:7299019 Q9VHS8
Homo sapiens (Hsa) Hs22059599_1 GI:22059599
Homo sapiens (Hsa) Hs7661920
(EIF4A3)
GI:7661920 P38919
Saccharomyces cerevisiae (Sce) YDR021w
(S000002428)
GI:6320224 Q12099
Schizosaccharomyces pombe (Spo) SPAC1F5.10 GI:19113775 Q10055
Encephalitozoon cuniculi (Ecu) ECU02g1520 GI:19074071 Q8SSD2
Arabidopsis thaliana (Ath) At1g51380 GI:15223841
Arabidopsis thaliana (Ath) At3g19760 GI:15230945
Arabidopsis thaliana (Ath) At4g37020 GI:15234591
Caenorhabditis elegans (Cel) CE09901
(WBGene00018007)
GI:17507121 O44781
Caenorhabditis elegans (Cel) CE25531 GI:17510385
Drosophila melanogaster (Dme) 7299019 GI:7299019 Q9VHS8
Homo sapiens (Hsa) Hs22059599_1 GI:22059599
Homo sapiens (Hsa) Hs7661920
(EIF4A3)
GI:7661920 P38919
Saccharomyces cerevisiae (Sce) YDR021w
(S000002428)
GI:6320224 Q12099
Schizosaccharomyces pombe (Spo) SPAC1F5.10 GI:19113775 Q10055
Encephalitozoon cuniculi (Ecu) ECU02g1520 GI:19074071 Q8SSD2
Arabidopsis thaliana (Ath) At1g51380 GI:15223841
Arabidopsis thaliana (Ath) At3g19760 GI:15230945
Arabidopsis thaliana (Ath) At4g37020 GI:15234591
Caenorhabditis elegans (Cel) CE09901
(WBGene00018007)
GI:17507121 O44781
Caenorhabditis elegans (Cel) CE25531 GI:17510385
Drosophila melanogaster (Dme) 7299019 GI:7299019 Q9VHS8
Homo sapiens (Hsa) Hs22059599_1 GI:22059599
Homo sapiens (Hsa) Hs7661920
(EIF4A3)
GI:7661920 P38919
Saccharomyces cerevisiae (Sce) YDR021w
(S000002428)
GI:6320224 Q12099
Schizosaccharomyces pombe (Spo) SPAC1F5.10 GI:19113775 Q10055
Encephalitozoon cuniculi (Ecu) ECU02g1520 GI:19074071 Q8SSD2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt4g37020
At1g51380
GO:0005634 nucleus C
IDA
AthAt3g19760
SpoSPAC1F5.10
GO:0005654 nucleoplasm C
IDA
AthAt3g19760
GO:0005730 nucleolus C
IDA
AthAt3g19760
ISS
SpoSPAC1F5.10
TAS
SceS000002428
GO:0005737 cytoplasm C
IDA
HsaEIF4A3
GO:0005829 cytosol C
IDA
SpoSPAC1F5.10
GO:0016020 membrane C
IDA
AthAt3g19760
GO:0016607 nuclear speck C
IDA
AthAt3g19760
GO:0035145 exon-exon junction complex C
IDA
AthAt3g19760
GO:0003674 molecular_function F
ND
AthAt4g37020
GO:0004004 ATP-dependent RNA helicase activity F
IDA
HsaEIF4A3
ISS
SpoSPAC1F5.10
TAS
SceS000002428
GO:0005515 protein binding F
IPI
AthAt3g19760
HsaEIF4A3
GO:0005524 ATP binding F
IC
SpoSPAC1F5.10
IDA
HsaEIF4A3
GO:0008026 ATP-dependent helicase activity F
ISS
AthAt1g51380
At3g19760
GO:0008143 poly(A) RNA binding F
IDA
HsaEIF4A3
GO:0000003 reproduction P
IMP
CelWBGene00018007
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000002428
GO:0000910 cytokinesis P
IMP
CelWBGene00018007
GO:0001666 response to hypoxia P
IDA
AthAt3g19760
GO:0001703 gastrulation with mouth forming
first
P
IMP
CelWBGene00018007
GO:0002119 nematode larval development P
IMP
CelWBGene00018007
GO:0006364 rRNA processing P
ISS
SpoSPAC1F5.10
GO:0006397 mRNA processing P
IPI
AthAt3g19760
GO:0007369 gastrulation P
IMP
CelWBGene00018007
GO:0008150 biological_process P
ND
AthAt4g37020
GO:0009790 embryo development P
IMP
CelWBGene00018007
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00018007
GO:0017148 negative regulation of translation P
IDA
HsaEIF4A3
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00018007
GO:0040007 growth P
IMP
CelWBGene00018007
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00018007
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00018007
GO:0045727 positive regulation of translation P
IMP
HsaEIF4A3
GO:0051301 cell division P
IMP
CelWBGene00018007

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5602

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) EIF4A3 GI:7661920 P38919
Pan troglodytes (Ptr) EIF4A3 GI:114670845
Canis familiaris (Cfa) EIF4A3 GI:73964736
Mus musculus (Mmu) Eif4a3 GI:20149756
Gallus gallus (Gga) EIF4A3 GI:71897163
Drosophila melanogaster (Dme) eIF4AIII
(FBgn0037573)
GI:24645031
Anopheles gambiae (Aga) AgaP_AGAP003089 GI:118783118
Caenorhabditis elegans (Cel) F33D11.10
(CE09901;
WBGene00018007)
GI:17507121 O44781
Caenorhabditis elegans (Cel) Y65B4A.6
(CE34419;
WBGene00022029)
GI:71995724
Schizosaccharomyces pombe (Spo) SPAC1F5.10 GI:19113775 Q10055
Saccharomyces cerevisiae (Sce) FAL1
(S000002428)
GI:6320224 Q12099
Kluyveromyces lactis (Kla) KLLA0A10659g GI:50303057
Eremothecium gossypii (Ego) AGOS_AER408W GI:45191009
Magnaporthe grisea (Mgr) MGG_04885 GI:39940710
Neurospora crassa (Ncr) NCU01234.1 GI:32412494
Arabidopsis thaliana (Ath) AT3G19760 GI:15230945
Oryza sativa (Osa) Os01g0639100 GI:115438787
Oryza sativa (Osa) Os03g0566800 GI:115453811
Plasmodium falciparum (Pfa) PFD1070w GI:124505577


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt3g19760
SpoSPAC1F5.10
GO:0005654 nucleoplasm C
IDA
AthAt3g19760
GO:0005730 nucleolus C
IDA
AthAt3g19760
ISS
SpoSPAC1F5.10
TAS
SceS000002428
GO:0005737 cytoplasm C
IDA
HsaEIF4A3
GO:0005829 cytosol C
IDA
SpoSPAC1F5.10
GO:0016020 membrane C
IDA
AthAt3g19760
GO:0016281 eukaryotic translation initiation factor 4F
complex
C
ISS
DmeFBgn0037573
PfaPFD1070w
GO:0016607 nuclear speck C
IDA
AthAt3g19760
GO:0035145 exon-exon junction complex C
IDA
AthAt3g19760
GO:0071011 precatalytic spliceosome C
IDA
DmeFBgn0037573
GO:0071013 catalytic step 2 spliceosome C
IDA
DmeFBgn0037573
GO:0003743 translation initiation factor activity F
ISS
DmeFBgn0037573
PfaPFD1070w
GO:0004004 ATP-dependent RNA helicase activity F
IDA
HsaEIF4A3
ISS
DmeFBgn0037573
PfaPFD1070w
SpoSPAC1F5.10
TAS
SceS000002428
GO:0005515 protein binding F
IPI
AthAt3g19760
HsaEIF4A3
GO:0005524 ATP binding F
IC
SpoSPAC1F5.10
IDA
HsaEIF4A3
GO:0008026 ATP-dependent helicase activity F
ISS
AthAt3g19760
GO:0008143 poly(A) RNA binding F
IDA
HsaEIF4A3
GO:0000003 reproduction P
IMP
CelWBGene00018007
WBGene00022029
GO:0000398 nuclear mRNA splicing, via spliceosome P
IC
DmeFBgn0037573
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)
P
IMP
SceS000002428
GO:0000910 cytokinesis P
IMP
CelWBGene00018007
GO:0001666 response to hypoxia P
IDA
AthAt3g19760
GO:0001703 gastrulation with mouth forming
first
P
IMP
CelWBGene00018007
GO:0002119 nematode larval development P
IMP
CelWBGene00018007
WBGene00022029
GO:0006364 rRNA processing P
ISS
SpoSPAC1F5.10
GO:0006397 mRNA processing P
IPI
AthAt3g19760
GO:0006413 translational initiation P
ISS
DmeFBgn0037573
GO:0006446 regulation of translational initiation P
ISS
PfaPFD1070w
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0037573
GO:0007369 gastrulation P
IMP
CelWBGene00018007
GO:0009790 embryo development P
IMP
CelWBGene00018007
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00018007
WBGene00022029
GO:0017148 negative regulation of translation P
IDA
HsaEIF4A3
GO:0018991 oviposition P
IMP
CelWBGene00022029
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle
P
IMP
CelWBGene00022029
WBGene00018007
GO:0040007 growth P
IMP
CelWBGene00018007
WBGene00022029
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00018007
GO:0040011 locomotion P
IMP
CelWBGene00022029
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00018007
WBGene00022029
GO:0045727 positive regulation of translation P
IMP
HsaEIF4A3
GO:0051301 cell division P
IMP
CelWBGene00018007

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1817

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga5372 ENSANGP00000020417
Ashbya gossypii (Ago) ago2908 AER408W
Arabidopsis thaliana (Ath) ath14260 At3g19760.1
Caenorhabditis elegans (Cel) cel7974 F33D11.10
(CE09901;
WBGene00018007)
Caenorhabditis elegans (Cel) cel20278 Y65B4A.6
(CE34419;
WBGene00022029)
Candida glabrata (Cgl) cgl4943 CAGL0M06567g
Cryptococcus neoformans (Cne) cne5685 179.m00548
Dictyostelium discoideum (Ddi) ddi11454 DDB0191511
Debaryomyces hansenii (Dha) dha2511 DEHA0D04752g
Drosophila melanogaster (Dme) dme11497 CG7483-PA
(FBgn0037573)
Danio rerio (Dre) dre28064 ENSDARP00000027276
(ddx48)
Q7ZVA6
Takifugu rubripes (Fru) fru13558 SINFRUP00000172479
Takifugu rubripes (Fru) fru13559 SINFRUP00000175532
Takifugu rubripes (Fru) fru13557 SINFRUP00000176617
Gallus gallus (Gga) gga6882 ENSGALP00000013887
(EIF4A3)
Homo sapiens (Hsa) hsa14468 ENSP00000269349
(EIF4A3)
P38919
Kluyveromyces lactis (Kla) kla463 KLLA0A10659g
Mus musculus (Mmu) mmu5270 ENSMUSP00000026667
(MGI:1923731)
Q91VC3
Mus musculus (Mmu) mmu22141 ENSMUSP00000075207
(GI:668137)
Mus musculus (Mmu) mmu22941 ENSMUSP00000075673
Mus musculus (Mmu) mmu22553 ENSMUSP00000077047
Neurospora crassa (Ncr) ncr1197 NCU01234.2
Oryza sativa (Osa) osa12496 2825.m00167
Oryza sativa (Osa) osa47833 5652.m00289
Oryza sativa (Osa) osa849 905.m00134
Plasmodium falciparum (Pfa) pfa3303 PFD1070w
Saccharomyces cerevisiae (Sce) sce1051 YDR021W
(S000002428)
Schizosaccharomyces pombe (Spo) spo1861 SPAC1F5.10 Q10055
Yarrowia lipolytica (Yli) yli5449 YALI0F02695g