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Search term: YDR059C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name UBC5
SGD link S000002466
Alternative ID YDR059C
Description Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived, abnormal, or excess proteins, including histone H3; central component of the cellular stress response; expression is heat inducible
Synonyms YDR059C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0417 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Ubiquitin-protein ligase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g16890 GI:18394416
Arabidopsis thaliana (Ath) At1g36340 GI:18400088
Arabidopsis thaliana (Ath) At1g64230 GI:15222650
Arabidopsis thaliana (Ath) At1g78870 GI:18412149
Arabidopsis thaliana (Ath) At2g16740 GI:18398199
Arabidopsis thaliana (Ath) At2g32790 GI:18403085
Arabidopsis thaliana (Ath) At3g08690 GI:18398206
Arabidopsis thaliana (Ath) At3g08700 GI:18398208
Arabidopsis thaliana (Ath) At3g13550 GI:18400056
Arabidopsis thaliana (Ath) At4g27960 GI:464986
Arabidopsis thaliana (Ath) At5g25760 GI:18420949
Arabidopsis thaliana (Ath) At5g41700 GI:18422127
Arabidopsis thaliana (Ath) At5g53300 GI:18423494
Arabidopsis thaliana (Ath) At5g56150 GI:18423829
Caenorhabditis elegans (Cel) CE03482
(WBGene00002344)		 GI:17541470 P35129
Caenorhabditis elegans (Cel) CE09712 GI:17506901
Caenorhabditis elegans (Cel) CE10824 GI:17534249
Caenorhabditis elegans (Cel) CE28997 GI:17543626
Drosophila melanogaster (Dme) 7292764 GI:7292764
Drosophila melanogaster (Dme) 7292948
(FBgn0000173)		 GI:17530929
Drosophila melanogaster (Dme) 7295708_2
(FBgn0027609)		 GI:19920682
Drosophila melanogaster (Dme) 7296089 GI:7296089 Q9VQ00
Drosophila melanogaster (Dme) 7297757
(FBgn0015320)		 GI:17137158 P52485
Drosophila melanogaster (Dme) 7298165
(FBgn0028913)		 GI:19921342
Drosophila melanogaster (Dme) 7299919 GI:136643
Homo sapiens (Hsa) Hs17476541 GI:17476541
Homo sapiens (Hsa) Hs22043797 GI:16553859 Q96LR5
Homo sapiens (Hsa) Hs22054779 GI:6941766 Q5JXB2
Homo sapiens (Hsa) Hs22064361 GI:22064361
Homo sapiens (Hsa) Hs4507773
(UBE2D1)		 GI:4507773 P51668
Homo sapiens (Hsa) Hs4507775
(UBE2D2)		 GI:4507775 P62837
Homo sapiens (Hsa) Hs4507777 GI:4507777 P61077
Homo sapiens (Hsa) Hs4507779
(UBE2E1)		 GI:4507779 P51965
Homo sapiens (Hsa) Hs4507793
(UBE2N)		 GI:4507793 P61088
Homo sapiens (Hsa) Hs5454146
(UBE2E3)		 GI:5454146 Q969T4
Homo sapiens (Hsa) Hs7661808
(UBE2T)		 GI:7661808 Q9NPD8
Homo sapiens (Hsa) Hs8393719
(UBE2D4)		 GI:8393719 Q9Y2X8
Saccharomyces cerevisiae (Sce) YBR082c
(S000000286)		 GI:6319556 P15731
Saccharomyces cerevisiae (Sce) YDR059c
(S000002466)		 GI:6320264 P15732
Saccharomyces cerevisiae (Sce) YDR092w
(S000002499)		 GI:6320297 P52490
Saccharomyces cerevisiae (Sce) YGR133w
(S000003365)		 GI:6321572 P29340
Schizosaccharomyces pombe (Spo) SPAC11E3.04c GI:19115841 O13685
Schizosaccharomyces pombe (Spo) SPAC1250.03 GI:19115771 Q9UTN8
Schizosaccharomyces pombe (Spo) SPBC119.02 GI:19112075 P46595
Schizosaccharomyces pombe (Spo) SPBC1198.09 GI:19111870 Q9P6I1
Encephalitozoon cuniculi (Ecu) ECU10g0940 GI:19074703 Q8SR36
Encephalitozoon cuniculi (Ecu) ECU11g1990 GI:19074999 Q8SQR1
Arabidopsis thaliana (Ath) At1g16890 GI:18394416
Arabidopsis thaliana (Ath) At1g36340 GI:18400088
Arabidopsis thaliana (Ath) At1g64230 GI:15222650
Arabidopsis thaliana (Ath) At1g78870 GI:18412149
Arabidopsis thaliana (Ath) At2g16740 GI:18398199
Arabidopsis thaliana (Ath) At2g32790 GI:18403085
Arabidopsis thaliana (Ath) At3g08690 GI:18398206
Arabidopsis thaliana (Ath) At3g08700 GI:18398208
Arabidopsis thaliana (Ath) At3g13550 GI:18400056
Arabidopsis thaliana (Ath) At4g27960 GI:464986
Arabidopsis thaliana (Ath) At5g25760 GI:18420949
Arabidopsis thaliana (Ath) At5g41700 GI:18422127
Arabidopsis thaliana (Ath) At5g53300 GI:18423494
Arabidopsis thaliana (Ath) At5g56150 GI:18423829
Caenorhabditis elegans (Cel) CE03482
(WBGene00002344)		 GI:17541470 P35129
Caenorhabditis elegans (Cel) CE09712 GI:17506901
Caenorhabditis elegans (Cel) CE10824 GI:17534249
Caenorhabditis elegans (Cel) CE28997 GI:17543626
Drosophila melanogaster (Dme) 7292764 GI:7292764
Drosophila melanogaster (Dme) 7292948
(FBgn0000173)		 GI:17530929
Drosophila melanogaster (Dme) 7295708_2
(FBgn0027609)		 GI:19920682
Drosophila melanogaster (Dme) 7296089 GI:7296089 Q9VQ00
Drosophila melanogaster (Dme) 7297757
(FBgn0015320)		 GI:17137158 P52485
Drosophila melanogaster (Dme) 7298165
(FBgn0028913)		 GI:19921342
Drosophila melanogaster (Dme) 7299919 GI:136643
Homo sapiens (Hsa) Hs17476541 GI:17476541
Homo sapiens (Hsa) Hs22043797 GI:16553859 Q96LR5
Homo sapiens (Hsa) Hs22054779 GI:6941766 Q5JXB2
Homo sapiens (Hsa) Hs22064361 GI:22064361
Homo sapiens (Hsa) Hs4507773
(UBE2D1)		 GI:4507773 P51668
Homo sapiens (Hsa) Hs4507775
(UBE2D2)		 GI:4507775 P62837
Homo sapiens (Hsa) Hs4507777 GI:4507777 P61077
Homo sapiens (Hsa) Hs4507779
(UBE2E1)		 GI:4507779 P51965
Homo sapiens (Hsa) Hs4507793
(UBE2N)		 GI:4507793 P61088
Homo sapiens (Hsa) Hs5454146
(UBE2E3)		 GI:5454146 Q969T4
Homo sapiens (Hsa) Hs7661808
(UBE2T)		 GI:7661808 Q9NPD8
Homo sapiens (Hsa) Hs8393719
(UBE2D4)		 GI:8393719 Q9Y2X8
Saccharomyces cerevisiae (Sce) YBR082c
(S000000286)		 GI:6319556 P15731
Saccharomyces cerevisiae (Sce) YDR059c
(S000002466)		 GI:6320264 P15732
Saccharomyces cerevisiae (Sce) YDR092w
(S000002499)		 GI:6320297 P52490
Saccharomyces cerevisiae (Sce) YGR133w
(S000003365)		 GI:6321572 P29340
Schizosaccharomyces pombe (Spo) SPAC11E3.04c GI:19115841 O13685
Schizosaccharomyces pombe (Spo) SPAC1250.03 GI:19115771 Q9UTN8
Schizosaccharomyces pombe (Spo) SPBC119.02 GI:19112075 P46595
Schizosaccharomyces pombe (Spo) SPBC1198.09 GI:19111870 Q9P6I1
Encephalitozoon cuniculi (Ecu) ECU10g0940 GI:19074703 Q8SR36
Encephalitozoon cuniculi (Ecu) ECU11g1990 GI:19074999 Q8SQR1
Arabidopsis thaliana (Ath) At1g16890 GI:18394416
Arabidopsis thaliana (Ath) At1g36340 GI:18400088
Arabidopsis thaliana (Ath) At1g64230 GI:15222650
Arabidopsis thaliana (Ath) At1g78870 GI:18412149
Arabidopsis thaliana (Ath) At2g16740 GI:18398199
Arabidopsis thaliana (Ath) At2g32790 GI:18403085
Arabidopsis thaliana (Ath) At3g08690 GI:18398206
Arabidopsis thaliana (Ath) At3g08700 GI:18398208
Arabidopsis thaliana (Ath) At3g13550 GI:18400056
Arabidopsis thaliana (Ath) At4g27960 GI:464986
Arabidopsis thaliana (Ath) At5g25760 GI:18420949
Arabidopsis thaliana (Ath) At5g41700 GI:18422127
Arabidopsis thaliana (Ath) At5g53300 GI:18423494
Arabidopsis thaliana (Ath) At5g56150 GI:18423829
Caenorhabditis elegans (Cel) CE03482
(WBGene00002344)		 GI:17541470 P35129
Caenorhabditis elegans (Cel) CE09712 GI:17506901
Caenorhabditis elegans (Cel) CE10824 GI:17534249
Caenorhabditis elegans (Cel) CE28997 GI:17543626
Drosophila melanogaster (Dme) 7292764 GI:7292764
Drosophila melanogaster (Dme) 7292948
(FBgn0000173)		 GI:17530929
Drosophila melanogaster (Dme) 7295708_2
(FBgn0027609)		 GI:19920682
Drosophila melanogaster (Dme) 7296089 GI:7296089 Q9VQ00
Drosophila melanogaster (Dme) 7297757
(FBgn0015320)		 GI:17137158 P52485
Drosophila melanogaster (Dme) 7298165
(FBgn0028913)		 GI:19921342
Drosophila melanogaster (Dme) 7299919 GI:136643
Homo sapiens (Hsa) Hs17476541 GI:17476541
Homo sapiens (Hsa) Hs22043797 GI:16553859 Q96LR5
Homo sapiens (Hsa) Hs22054779 GI:6941766 Q5JXB2
Homo sapiens (Hsa) Hs22064361 GI:22064361
Homo sapiens (Hsa) Hs4507773
(UBE2D1)		 GI:4507773 P51668
Homo sapiens (Hsa) Hs4507775
(UBE2D2)		 GI:4507775 P62837
Homo sapiens (Hsa) Hs4507777 GI:4507777 P61077
Homo sapiens (Hsa) Hs4507779
(UBE2E1)		 GI:4507779 P51965
Homo sapiens (Hsa) Hs4507793
(UBE2N)		 GI:4507793 P61088
Homo sapiens (Hsa) Hs5454146
(UBE2E3)		 GI:5454146 Q969T4
Homo sapiens (Hsa) Hs7661808
(UBE2T)		 GI:7661808 Q9NPD8
Homo sapiens (Hsa) Hs8393719
(UBE2D4)		 GI:8393719 Q9Y2X8
Saccharomyces cerevisiae (Sce) YBR082c
(S000000286)		 GI:6319556 P15731
Saccharomyces cerevisiae (Sce) YDR059c
(S000002466)		 GI:6320264 P15732
Saccharomyces cerevisiae (Sce) YDR092w
(S000002499)		 GI:6320297 P52490
Saccharomyces cerevisiae (Sce) YGR133w
(S000003365)		 GI:6321572 P29340
Schizosaccharomyces pombe (Spo) SPAC11E3.04c GI:19115841 O13685
Schizosaccharomyces pombe (Spo) SPAC1250.03 GI:19115771 Q9UTN8
Schizosaccharomyces pombe (Spo) SPBC119.02 GI:19112075 P46595
Schizosaccharomyces pombe (Spo) SPBC1198.09 GI:19111870 Q9P6I1
Encephalitozoon cuniculi (Ecu) ECU10g0940 GI:19074703 Q8SR36
Encephalitozoon cuniculi (Ecu) ECU11g1990 GI:19074999 Q8SQR1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000151 ubiquitin ligase complex C
IDA
HsaUBE2E1
GO:0000502 proteasome complex C
IPI
SceS000000286
S000002466
GO:0005575 cellular_component C
ND
AthAt3g08700
At3g08690
At5g25760
At2g16740
At5g56150
At5g53300
SpoSPAC1250.03
GO:0005634 nucleus C
IDA
AthAt3g13550
At5g41700
HsaUBE2N
UBE2E1
SceS000002499
SpoSPAC11E3.04c
SPBC119.02
SPBC1198.09
GO:0005654 nucleoplasm C
EXP
HsaUBE2E1
UBE2D1
GO:0005737 cytoplasm C
IDA
AthAt5g41700
HsaUBE2D1
UBE2N
SceS000002499
TAS
HsaUBE2N
GO:0005773 vacuole C
IDA
AthAt1g36340
GO:0005777 peroxisome C
IDA
SceS000003365
GO:0005829 cytosol C
EXP
HsaUBE2E1
UBE2D1
UBE2N
IDA
SpoSPAC11E3.04c
SPBC119.02
SPBC1198.09
GO:0005886 plasma membrane C
IDA
AthAt1g16890
At1g64230
GO:0019005 SCF ubiquitin ligase complex C
NAS
DmeFBgn0027609
GO:0031371 ubiquitin conjugating enzyme complex C
IPI
SceS000002499
GO:0031372 UBC13-MMS2 complex C
IDA
HsaUBE2N
IPI
AthAt1g16890
At1g78870
GO:0004842 ubiquitin-protein ligase activity F
IDA
AthAt1g64230
At4g27960
At1g16890
At1g78870
At3g08690
At5g41700
At2g16740
At5g56150
At5g53300
HsaUBE2E1
UBE2D1
UBE2D2
UBE2D4
UBE2N
UBE2E3
UBE2T
SceS000002466
S000002499
S000000286
S000003365
SpoSPAC11E3.04c
IGI
DmeFBgn0015320
ISS
AthAt1g64230
At3g13550
At3g08700
At4g27960
At5g25760
At1g78870
At3g08690
At1g36340
At1g16890
At2g16740
At2g32790
At5g41700
At5g53300
At5g56150
DmeFBgn0027609
FBgn0000173
FBgn0015320
FBgn0028913
SceS000003365
SpoSPAC1250.03
SPBC1198.09
NAS
DmeFBgn0027609
FBgn0000173
FBgn0015320
TAS
SpoSPBC119.02
GO:0005515 protein binding F
IPI
AthAt1g78870
At5g25760
At3g13550
At5g41700
At1g16890
HsaUBE2N
UBE2E1
UBE2D1
UBE2D2
UBE2E3
UBE2D4
SpoSPAC11E3.04c
GO:0019787 small conjugating protein ligase
activity		 F
TAS
DmeFBgn0027609
GO:0031625 ubiquitin protein ligase binding F
IPI
CelWBGene00002344
GO:0042296 ISG15 ligase activity F
IDA
HsaUBE2E1
GO:0042803 protein homodimerization activity F
IDA
SpoSPAC11E3.04c
GO:0043130 ubiquitin binding F
IDA
HsaUBE2N
GO:0000003 reproduction P
IMP
CelWBGene00002344
GO:0000070 mitotic sister chromatid segregation P
IMP
SpoSPBC119.02
GO:0000209 protein polyubiquitination P
IDA
HsaUBE2E1
UBE2D1
SceS000000286
S000002466
S000002499
ISS
SpoSPBC119.02
TAS
SceS000003365
GO:0000724 double-strand break repair via homologous
recombination		 P
IMP
HsaUBE2N
GO:0000729 DNA double-strand break processing P
IMP
HsaUBE2N
GO:0002119 nematode larval development P
IMP
CelWBGene00002344
GO:0006282 regulation of DNA repair P
TAS
HsaUBE2N
GO:0006301 postreplication repair P
IGI
AthAt1g78870
SceS000002499
IMP
HsaUBE2N
SceS000002499
SpoSPAC11E3.04c
GO:0006414 translational elongation P
RCA
SceS000003365
GO:0006464 protein modification process P
ISS
AthAt2g32790
TAS
HsaUBE2N
UBE2D2
GO:0006508 proteolysis P
RCA
SceS000002466
TAS
HsaUBE2N
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
IDA
AthAt2g16740
At1g64230
At3g08690
At1g16890
At1g78870
At5g41700
At4g27960
At5g53300
At5g56150
HsaUBE2D1
TAS
AthAt4g27960
At3g08690
At5g41700
At5g53300
HsaUBE2E1
UBE2D2
GO:0006513 protein monoubiquitination P
IDA
SceS000000286
S000003365
IMP
SceS000003365
TAS
SceS000002499
GO:0006635 fatty acid beta-oxidation P
IMP
AthAt5g25760
GO:0006914 autophagy P
RCA
SceS000002466
GO:0006915 apoptosis P
IMP
DmeFBgn0027609
NAS
DmeFBgn0027609
GO:0006917 induction of apoptosis P
NAS
DmeFBgn0027609
GO:0006950 response to stress P
IDA
SceS000002466
S000000286
TAS
SceS000000286
GO:0007031 peroxisome organization P
IMP
AthAt5g25760
SceS000003365
ISS
SpoSPBC1198.09
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002466
GO:0007126 meiosis P
IMP
CelWBGene00002344
GO:0007281 germ cell development P
IMP
CelWBGene00002344
GO:0007409 axonogenesis P
IMP
DmeFBgn0000173
GO:0007412 axon target recognition P
IMP
DmeFBgn0000173
GO:0007625 grooming behavior P
IMP
DmeFBgn0000173
TAS
DmeFBgn0000173
GO:0007629 flight behavior P
IMP
DmeFBgn0000173
GO:0007630 jump response P
IMP
DmeFBgn0000173
GO:0008054 cyclin catabolic process P
IGI
SpoSPBC119.02
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00002344
GO:0008594 photoreceptor cell morphogenesis P
IMP
DmeFBgn0000173
GO:0009266 response to temperature stimulus P
RCA
SceS000002466
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002344
GO:0010039 response to iron ion P
IMP
AthAt1g78870
At1g16890
GO:0010053 root epidermal cell differentiation P
IGI
AthAt1g16890
At1g78870
GO:0010099 regulation of photomorphogenesis P
IMP
AthAt3g13550
GO:0010390 histone monoubiquitination P
IDA
HsaUBE2E1
GO:0010994 free ubiquitin chain polymerization P
IDA
SceS000002499
GO:0016558 protein import into peroxisome
matrix		 P
IMP
AthAt5g25760
GO:0016562 protein import into peroxisome matrix, receptor
recycling		 P
IMP
SceS000003365
GO:0016567 protein ubiquitination P
IC
SpoSPAC1250.03
IDA
CelWBGene00002344
HsaUBE2E1
UBE2D2
SceS000000286
SpoSPAC11E3.04c
IMP
HsaUBE2N
ISS
SpoSPBC1198.09
NAS
DmeFBgn0000173
TAS
DmeFBgn0027609
HsaUBE2N
SpoSPBC119.02
GO:0016574 histone ubiquitination P
IMP
HsaUBE2N
GO:0019915 lipid storage P
IDA
DmeFBgn0015320
GO:0030509 BMP signaling pathway P
EXP
HsaUBE2D1
GO:0031058 positive regulation of histone
modification		 P
IMP
HsaUBE2N
GO:0031145 anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic
process		 P
EXP
HsaUBE2E1
UBE2D1
GO:0031398 positive regulation of protein
ubiquitination		 P
IDA
HsaUBE2D1
GO:0032020 ISG15-protein conjugation P
IDA
HsaUBE2E1
GO:0033182 regulation of histone ubiquitination P
IMP
HsaUBE2N
GO:0033523 histone H2B ubiquitination P
IDA
HsaUBE2E1
GO:0035519 protein K29-linked ubiquitination P
IDA
HsaUBE2T
UBE2D4
GO:0040007 growth P
IMP
CelWBGene00002344
GO:0040011 locomotion P
IMP
CelWBGene00002344
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00002344
GO:0042221 response to chemical stimulus P
IMP
DmeFBgn0000173
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB
cascade		 P
IMP
HsaUBE2N
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SceS000000286
GO:0044314 protein K27-linked ubiquitination P
IDA
HsaUBE2T
UBE2D4
GO:0045739 positive regulation of DNA repair P
IMP
HsaUBE2N
GO:0046668 regulation of retinal cell programmed cell
death		 P
NAS
DmeFBgn0027609
GO:0046675 induction of compound eye retinal cell programmed
cell death		 P
IMP
DmeFBgn0027609
GO:0046686 response to cadmium ion P
IEP
AthAt1g78870
GO:0050852 T cell receptor signaling pathway P
IMP
HsaUBE2N
GO:0051092 positive regulation of NF-kappaB transcription
factor activity		 P
IMP
HsaUBE2N
GO:0051436 negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaUBE2E1
UBE2D1
GO:0051437 positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaUBE2E1
UBE2D1
GO:0051443 positive regulation of ubiquitin-protein ligase
activity		 P
IMP
HsaUBE2N
GO:0051865 protein autoubiquitination P
IDA
SceS000003365
GO:0070534 protein K63-linked ubiquitination P
IDA
HsaUBE2E3
UBE2N
UBE2T
UBE2D4
GO:0070936 protein K48-linked ubiquitination P
IDA
HsaUBE2E1
UBE2D2
UBE2E3
UBE2D1
UBE2D4
UBE2T
GO:0070979 protein K11-linked ubiquitination P
IDA
HsaUBE2E3
UBE2T
UBE2D4
GO:0085020 protein K6-linked ubiquitination P
IDA
HsaUBE2T
UBE2D4

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
121728

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) UBE2D3 GI:33149316
Pan troglodytes (Ptr) UBE2D3P GI:114595472
Mus musculus (Mmu) Gm4596 GI:149251457
Saccharomyces cerevisiae (Sce) UBC5
(S000002466)		 GI:6320264 P15732
Arabidopsis thaliana (Ath) UBC28 GI:79320672
Arabidopsis thaliana (Ath) UBC9 GI:18417097
Arabidopsis thaliana (Ath) UBC10 GI:18423494
Oryza sativa (Osa) Os02g0261100 GI:115445413


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
IPI
SceS000002466
GO:0005575 cellular_component C
ND
AthUBC10
GO:0005886 plasma membrane C
IDA
AthUBC28
GO:0004842 ubiquitin-protein ligase activity F
IDA
AthUBC28
UBC10
UBC9
HsaUBE2D3
SceS000002466
ISS
AthUBC10
UBC28
UBC9
GO:0005515 protein binding F
IPI
HsaUBE2D3
GO:0000209 protein polyubiquitination P
IDA
HsaUBE2D3
SceS000002466
GO:0006464 protein modification process P
TAS
HsaUBE2D3
GO:0006508 proteolysis P
RCA
SceS000002466
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
IDA
AthUBC10
UBC9
UBC28
TAS
AthUBC10
UBC9
HsaUBE2D3
GO:0006513 protein monoubiquitination P
IDA
HsaUBE2D3
GO:0006914 autophagy P
RCA
SceS000002466
GO:0006950 response to stress P
IDA
SceS000002466
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002466
GO:0009266 response to temperature stimulus P
RCA
SceS000002466
GO:0016567 protein ubiquitination P
IDA
HsaUBE2D3
GO:0030509 BMP signaling pathway P
EXP
HsaUBE2D3
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
HsaUBE2D3
GO:0070936 protein K48-linked ubiquitination P
IDA
HsaUBE2D3
GO:0070979 protein K11-linked ubiquitination P
IDA
HsaUBE2D3

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_227

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga14719 ENSANGP00000019908
Ashbya gossypii (Ago) ago2676 AER173C
Arabidopsis thaliana (Ath) ath5635 At1g64230.1
Arabidopsis thaliana (Ath) ath8510 At2g16740.1
Arabidopsis thaliana (Ath) ath12935 At3g08690.1
Arabidopsis thaliana (Ath) ath20815 At4g27960.1
Arabidopsis thaliana (Ath) ath20816 At4g27960.2
Arabidopsis thaliana (Ath) ath25956 At5g41700.1
Arabidopsis thaliana (Ath) ath25957 At5g41700.2
Arabidopsis thaliana (Ath) ath25959 At5g41700.4
Arabidopsis thaliana (Ath) ath27295 At5g53300.1
Arabidopsis thaliana (Ath) ath27296 At5g53300.2
Arabidopsis thaliana (Ath) ath27620 At5g56150.1
Arabidopsis thaliana (Ath) ath27621 At5g56150.2
Caenorhabditis elegans (Cel) cel13091 M7.1
(CE03482;
WBGene00002344)
Candida glabrata (Cgl) cgl1147 CAGL0E04752g
Cryptococcus neoformans (Cne) cne1195 180.m00124
Dictyostelium discoideum (Ddi) ddi9010 DDB0188947
Debaryomyces hansenii (Dha) dha6010 DEHA0G06941g
Drosophila melanogaster (Dme) dme12626 CG7425-PA
(FBgn0011217)
Danio rerio (Dre) dre27164 ENSDARP00000008552
Danio rerio (Dre) dre12325 ENSDARP00000035199
(zgc:56340)		 Q7ZUR2
Danio rerio (Dre) dre1620 ENSDARP00000048852
(zgc:66323)		 Q7SXH5
Danio rerio (Dre) dre12326 ENSDARP00000049284
(zgc:55886)		 Q7ZUK1
Danio rerio (Dre) dre1616 ENSDARP00000049639
Takifugu rubripes (Fru) fru22277 SINFRUP00000147077
Takifugu rubripes (Fru) fru29034 SINFRUP00000149088
Takifugu rubripes (Fru) fru30710 SINFRUP00000158227
Gallus gallus (Gga) gga5573 ENSGALP00000001261
Gallus gallus (Gga) gga17977 ENSGALP00000020092
(RCJMB04_7i20)		 Q5ZL59
Homo sapiens (Hsa) hsa3931 ENSP00000185885
(UBE2D1)
Homo sapiens (Hsa) hsa28521 ENSP00000222402
(UBE2D4)		 Q9Y2X8
Homo sapiens (Hsa) hsa24470 ENSP00000226587
Homo sapiens (Hsa) hsa25825 ENSP00000253815
(UBE2D2)		 Q96RP6
Homo sapiens (Hsa) hsa24468 ENSP00000318494
(UBE2D3)		 P61077-1
Homo sapiens (Hsa) hsa24466 ENSP00000337208
(UBE2D3)		 P61077-1
Homo sapiens (Hsa) hsa24467 ENSP00000337262
(UBE2D3)
Homo sapiens (Hsa) hsa25824 ENSP00000344069
(UBE2D3)		 P61077-1
Homo sapiens (Hsa) hsa24469 ENSP00000345285
(UBE2D3)		 P61077-2
Homo sapiens (Hsa) hsa24472 ENSP00000349722
(UBE2D3)		 P61077-3
Homo sapiens (Hsa) hsa24471 ENSP00000355039
Kluyveromyces lactis (Kla) kla3515 KLLA0E12595g
Mus musculus (Mmu) mmu2306 ENSMUSP00000020085
(MGI:2384911)		 P61080
Mus musculus (Mmu) mmu16782 ENSMUSP00000036413
(MGI:1930715)		 P62838
Mus musculus (Mmu) mmu12510 ENSMUSP00000051634
Mus musculus (Mmu) mmu20552 ENSMUSP00000072387
(MGI:1920568)		 Q6ZWY6
Mus musculus (Mmu) mmu12509 ENSMUSP00000076943
Neurospora crassa (Ncr) ncr2224 NCU02289.2
Oryza sativa (Osa) osa2372 1943.m00209
Oryza sativa (Osa) osa3034 1997.m00140
Oryza sativa (Osa) osa6869 2486.m00118
Oryza sativa (Osa) osa23520 3774.m00144
Oryza sativa (Osa) osa35477 4777.m00100
Oryza sativa (Osa) osa35486 4777.m00105
Oryza sativa (Osa) osa35510 4777.m00163
Oryza sativa (Osa) osa35511 4777.m00164
Oryza sativa (Osa) osa46788 5761.m00125
Oryza sativa (Osa) osa55663 6165.m00038
Oryza sativa (Osa) osa55501 6374.m00115
Oryza sativa (Osa) osa65498 6760.m00145
Oryza sativa (Osa) osa81594 8129.m00209
Oryza sativa (Osa) osa81649 8129.m00291
Plasmodium falciparum (Pfa) pfa5350 PFL0190w
Rattus norvegicus (Rno) rno17799 ENSRNOP00000000750
(RGD:1307886)
Rattus norvegicus (Rno) rno17057 ENSRNOP00000019118
Rattus norvegicus (Rno) rno13954 ENSRNOP00000026257
Rattus norvegicus (Rno) rno9907 ENSRNOP00000039621
(RGD:69425)		 P70711
Rattus norvegicus (Rno) rno17056 ENSRNOP00000045087
(RGD:619912)		 P61078
Rattus norvegicus (Rno) rno31861 ENSRNOP00000046527
Saccharomyces cerevisiae (Sce) sce338 YBR082C
(S000000286)
Saccharomyces cerevisiae (Sce) sce1093 YDR059C
(S000002466)
Schizosaccharomyces pombe (Spo) spo2440 SPBC119.02 P46595
Yarrowia lipolytica (Yli) yli3339 YALI0D15312g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
IPI
SceS000000286
S000002466
GO:0005575 cellular_component C
ND
AthAt3g08690
At2g16740
At5g56150
At5g53300
MmuMGI:1930715
MGI:2384911
MGI:1920568
PfaPFL0190w
GO:0005634 nucleus C
IDA
AthAt5g41700
SpoSPBC119.02
GO:0005737 cytoplasm C
IDA
AthAt5g41700
GO:0005829 cytosol C
IDA
SpoSPBC119.02
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0011217
GO:0005886 plasma membrane C
IDA
AthAt1g64230
GO:0003674 molecular_function F
ND
MmuMGI:1920568
GO:0004842 ubiquitin-protein ligase activity F
IDA
AthAt1g64230
At4g27960
At3g08690
At5g41700
At2g16740
At5g56150
At5g53300
SceS000002466
S000000286
IGI
DmeFBgn0011217
ISO
MmuMGI:1930715
MGI:2384911
ISS
AthAt1g64230
At4g27960
At3g08690
At2g16740
At5g41700
At5g53300
At5g56150
DmeFBgn0011217
NAS
DmeFBgn0011217
TAS
DmeFBgn0011217
SpoSPBC119.02
GO:0005515 protein binding F
IPI
AthAt5g41700
DmeFBgn0011217
MmuMGI:2384911
MGI:1930715
GO:0031625 ubiquitin protein ligase binding F
IPI
CelWBGene00002344
GO:0000003 reproduction P
IMP
CelWBGene00002344
GO:0000070 mitotic sister chromatid segregation P
IMP
SpoSPBC119.02
GO:0000209 protein polyubiquitination P
IDA
MmuMGI:2384911
SceS000000286
S000002466
ISS
SpoSPBC119.02
GO:0001745 compound eye morphogenesis P
IMP
DmeFBgn0011217
GO:0001751 compound eye photoreceptor cell
differentiation		 P
IMP
DmeFBgn0011217
GO:0002119 nematode larval development P
IMP
CelWBGene00002344
GO:0006508 proteolysis P
RCA
SceS000002466
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
IDA
AthAt2g16740
At1g64230
At3g08690
At5g41700
At4g27960
At5g53300
At5g56150
TAS
AthAt4g27960
At3g08690
At5g41700
At5g53300
GO:0006513 protein monoubiquitination P
IDA
SceS000000286
GO:0006914 autophagy P
RCA
SceS000002466
GO:0006950 response to stress P
IDA
SceS000002466
S000000286
TAS
SceS000000286
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002466
GO:0007067 mitosis P
IMP
DmeFBgn0011217
GO:0007126 meiosis P
IMP
CelWBGene00002344
GO:0007140 male meiosis P
IMP
DmeFBgn0011217
GO:0007281 germ cell development P
IMP
CelWBGene00002344
GO:0007286 spermatid development P
IMP
DmeFBgn0011217
GO:0008054 cyclin catabolic process P
IGI
SpoSPBC119.02
IMP
DmeFBgn0011217
GO:0008150 biological_process P
ND
MmuMGI:1920568
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00002344
GO:0009266 response to temperature stimulus P
RCA
SceS000002466
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002344
GO:0016322 neuron remodeling P
IDA
DmeFBgn0011217
GO:0016567 protein ubiquitination P
IDA
CelWBGene00002344
DmeFBgn0011217
SceS000000286
TAS
DmeFBgn0011217
SpoSPBC119.02
GO:0030718 germ-line stem cell maintenance P
IMP
DmeFBgn0011217
GO:0031647 regulation of protein stability P
IMP
DmeFBgn0011217
GO:0040007 growth P
IMP
CelWBGene00002344
GO:0040011 locomotion P
IMP
CelWBGene00002344
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00002344
GO:0043162 ubiquitin-dependent protein catabolic process via
the multivesicular body sorting
pathway		 P
IMP
SceS000000286
GO:0045676 regulation of R7 cell differentiation P
IGI
DmeFBgn0011217
GO:0048132 female germ-line stem cell division P
IMP
DmeFBgn0011217
GO:0048477 oogenesis P
TAS
DmeFBgn0011217
GO:0051276 chromosome organization P
IMP
DmeFBgn0011217

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC119.02
(P46595)		 YDR059C
(S000002466)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
IPI
SceS000002466
GO:0005634 nucleus C
IDA
SpoSPBC119.02
GO:0005829 cytosol C
IDA
SpoSPBC119.02
GO:0004842 ubiquitin-protein ligase activity F
IDA
SceS000002466
TAS
SpoSPBC119.02
GO:0000070 mitotic sister chromatid segregation P
IMP
SpoSPBC119.02
GO:0000209 protein polyubiquitination P
IDA
SceS000002466
ISS
SpoSPBC119.02
GO:0006508 proteolysis P
RCA
SceS000002466
GO:0006914 autophagy P
RCA
SceS000002466
GO:0006950 response to stress P
IDA
SceS000002466
GO:0007039 vacuolar protein catabolic process P
RCA
SceS000002466
GO:0008054 cyclin catabolic process P
IGI
SpoSPBC119.02
GO:0009266 response to temperature stimulus P
RCA
SceS000002466
GO:0016567 protein ubiquitination P
TAS
SpoSPBC119.02

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s.khadayate@ucl.ac.uk