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Search term: YDR087C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RRP1
SGD link S000002494
Alternative ID YDR087C
Description Essential evolutionarily conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits and processing of pre-rRNAs to mature rRNAs, associated with several distinct 66S pre-ribosomal particles
Synonyms YDR087C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3911 -CDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Nucleolar protein NOP52/RRP1

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE20571
(WBGene00008151)		 GI:17539272 Q18674
Drosophila melanogaster (Dme) 7298046 GI:14194975
Homo sapiens (Hsa) Hs22067314 GI:22067314
Homo sapiens (Hsa) Hs4503247
(RRP1)		 GI:4503247 P56182
Saccharomyces cerevisiae (Sce) YDR087c
(S000002494)		 GI:6320292 P35178
Schizosaccharomyces pombe (Spo) SPBC9B6.07 GI:19112541 Q9Y7M6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002494
SpoSPBC9B6.07
ISS
SpoSPBC9B6.07
GO:0005730 nucleolus C
IDA
HsaRRP1
SceS000002494
SpoSPBC9B6.07
ISS
SpoSPBC9B6.07
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000002494
GO:0003674 molecular_function F
ND
SceS000002494
SpoSPBC9B6.07
GO:0000003 reproduction P
IMP
CelWBGene00008151
GO:0002119 nematode larval development P
IMP
CelWBGene00008151
GO:0006364 rRNA processing P
IMP
SceS000002494
ISS
SpoSPBC9B6.07
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008151
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008151
GO:0040007 growth P
IMP
CelWBGene00008151
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008151

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
122159

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RRP1
(S000002494)		 GI:6320292 P35178
Kluyveromyces lactis (Kla) KLLA0C11979g GI:50305551
Eremothecium gossypii (Ego) AGOS_AGR158C GI:45201254
Magnaporthe grisea (Mgr) MGG_05146 GI:39940188
Neurospora crassa (Ncr) NCU07942.1 GI:32416340


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002494
GO:0005730 nucleolus C
IDA
SceS000002494
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000002494
GO:0003674 molecular_function F
ND
SceS000002494
GO:0006364 rRNA processing P
IMP
SceS000002494

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2388

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4905 ENSANGP00000010288
Ashbya gossypii (Ago) ago4469 AGR158C
Arabidopsis thaliana (Ath) ath24343 At5g20600.1
Caenorhabditis elegans (Cel) cel4258 C47E12.7
(CE20571;
WBGene00008151)
Candida glabrata (Cgl) cgl5138 CAGL0M11110g
Cryptococcus neoformans (Cne) cne4364 177.m03117
Dictyostelium discoideum (Ddi) ddi6432 DDB0205719
Debaryomyces hansenii (Dha) dha4610 DEHA0F04961g
Drosophila melanogaster (Dme) dme2261 CG12396-PA
(FBgn0022069)
Danio rerio (Dre) dre23567 ENSDARP00000033465
(nnp1)		 Q7ZVU9
Takifugu rubripes (Fru) fru18112 SINFRUP00000145921
Gallus gallus (Gga) gga24838 ENSGALP00000002213
Homo sapiens (Hsa) hsa21005 ENSP00000291569
Homo sapiens (Hsa) hsa21000 ENSP00000339145
(RRP1B)		 Q14684-1
Kluyveromyces lactis (Kla) kla1734 KLLA0C11979g
Mus musculus (Mmu) mmu2411 ENSMUSP00000038431
Mus musculus (Mmu) mmu2410 ENSMUSP00000058785
(MGI:1203500)		 P56183-1
Mus musculus (Mmu) mmu11368 ENSMUSP00000080085
(MGI:1919712)		 Q91YK2
Neurospora crassa (Ncr) ncr7734 NCU07942.2
Oryza sativa (Osa) osa28698 4207.m00143
Oryza sativa (Osa) osa83002 8199.m00125
Rattus norvegicus (Rno) rno17688 ENSRNOP00000001583
(RGD:1305633)
Rattus norvegicus (Rno) rno17692 ENSRNOP00000001597
(RGD:1307286)		 Q5M9F3
Saccharomyces cerevisiae (Sce) sce1122 YDR087C
(S000002494)
Schizosaccharomyces pombe (Spo) spo192 SPBC9B6.07 Q9Y7M6
Yarrowia lipolytica (Yli) yli3068 YALI0D08668g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1919712
GO:0005634 nucleus C
IDA
SceS000002494
SpoSPBC9B6.07
ISS
DmeFBgn0022069
SpoSPBC9B6.07
NAS
DmeFBgn0022069
GO:0005730 nucleolus C
IDA
SceS000002494
SpoSPBC9B6.07
ISS
SpoSPBC9B6.07
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000002494
GO:0003674 molecular_function F
ND
AthAt5g20600
MmuMGI:1919712
SceS000002494
SpoSPBC9B6.07
GO:0000003 reproduction P
IMP
CelWBGene00008151
GO:0000022 mitotic spindle elongation P
IMP
DmeFBgn0022069
GO:0002119 nematode larval development P
IMP
CelWBGene00008151
GO:0006364 rRNA processing P
IMP
SceS000002494
ISS
DmeFBgn0022069
SpoSPBC9B6.07
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00008151
GO:0008150 biological_process P
ND
MmuMGI:1919712
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00008151
GO:0016072 rRNA metabolic process P
NAS
DmeFBgn0022069
GO:0040007 growth P
IMP
CelWBGene00008151
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00008151

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC9B6.07
(Q9Y7M6)		 YDR087C
(S000002494)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002494
SpoSPBC9B6.07
ISS
SpoSPBC9B6.07
GO:0005730 nucleolus C
IDA
SceS000002494
SpoSPBC9B6.07
ISS
SpoSPBC9B6.07
GO:0030687 preribosome, large subunit precursor C
IDA
SceS000002494
GO:0003674 molecular_function F
ND
SceS000002494
SpoSPBC9B6.07
GO:0006364 rRNA processing P
IMP
SceS000002494
ISS
SpoSPBC9B6.07

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